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RALYL
HPA
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  • RALYL
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RALYL
Synonyms HNRPCL3
Gene descriptioni

Full gene name according to HGNC.

RALY RNA binding protein like
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband q21.2
Chromosome location (bp) 84182787 - 84921844
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000184672 (version 109)
Entrez gene 138046
HGNC HGNC:27036
UniProt Q86SE5 (UniProt - Evidence at protein level)
neXtProt NX_Q86SE5
GeneCards RALYL
Antibodypedia RALYL antibodies


PROTEIN FUNCTION
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

RNA-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables identical protein binding activity. Located in nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RALYL-201
ENSP00000430128
ENST00000517638
Q86SE5
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0042802 [identical protein binding]
Show all
304 aa
33.9 kDa
No 0
RALYL-202
ENSP00000428711
ENST00000517988
E5RG71
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
85 aa
9.2 kDa
No 0
RALYL-204
ENSP00000430065
ENST00000518566
B3KT61
[Direct mapping] RNA-binding Raly-like protein; cDNA FLJ37707 fis, clone BRHIP2017642, moderately similar to RNA-binding protein Raly
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005654 [nucleoplasm]
Show all
280 aa
31.1 kDa
No 0
RALYL-205
ENSP00000430367
ENST00000521268
Q86SE5
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0042802 [identical protein binding]
Show all
291 aa
32.3 kDa
No 0
RALYL-206
ENSP00000428310
ENST00000521376
E5RJ39
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
Show all
146 aa
16.4 kDa
No 0
RALYL-207
ENSP00000428667
ENST00000521695
Q86SE5
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0042802 [identical protein binding]
Show all
291 aa
32.3 kDa
No 0
RALYL-208
ENSP00000430394
ENST00000522455
Q86SE5
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0042802 [identical protein binding]
Show all
291 aa
32.3 kDa
No 0
RALYL-209
ENSP00000427787
ENST00000522613
E5RG71
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
Show all
85 aa
9.2 kDa
No 0
RALYL-210
ENSP00000429284
ENST00000522647
E5RIX9
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
Show all
47 aa
5.2 kDa
No 0
RALYL-211
ENSP00000428807
ENST00000523850
Q86SE5
[Direct mapping] RNA-binding Raly-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0042802 [identical protein binding]
Show all
218 aa
24.8 kDa
No 0

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