We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RAB11B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RAB11B
TISSUE SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:94.5 nTPM
HPA:75.0 nTPM
GTEx:94.5 nTPM
FANTOM5:128.4 Scaled Tags Per Million

SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.0
overview
Male, age 65
Small intestine sample 232
nTPM: 74.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 84.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 74.2
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 66.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.5
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 94.5
Samples: 187

Max nTPM: 157.5
Min nTPM: 62.0
Std nTPM: 13.4
Median nTPM: 94.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 157.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 132.7
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 131.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 126.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 126.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 117.8
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 117.1
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 116.2
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 116.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 115.3
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 114.8
GTEX-YFCO-1326-SM-664NV 40-49 years, male 112.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 111.8
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 111.5
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 111.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 110.5
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 110.5
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 110.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 109.9
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 109.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 109.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 108.9
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 108.8
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 108.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 107.7
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 107.3
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 107.3
GTEX-1192X-2526-SM-59868 50-59 years, male 106.7
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 106.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 105.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 105.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 105.6
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 105.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 105.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 105.3
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 105.2
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 105.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 105.1
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 105.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 105.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 104.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 104.9
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 104.4
GTEX-117YX-0326-SM-5GICL 50-59 years, male 104.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 102.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 102.7
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 102.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 102.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 102.3
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 102.0
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 101.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 101.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 101.7
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 101.6
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 101.2
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 101.1
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 101.1
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 100.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 100.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 100.7
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 100.6
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 100.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 100.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 99.8
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 99.7
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 99.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 98.7
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 98.7
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 98.5
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 98.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 98.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 98.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 97.6
GTEX-13111-1426-SM-5DUW3 50-59 years, male 97.3
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 97.3
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 97.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 97.1
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 96.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 96.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 96.8
GTEX-14PN3-2026-SM-68729 60-69 years, female 96.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 96.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 96.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 96.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 96.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 96.3
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 96.2
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 96.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 95.9
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 95.8
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 94.9
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 94.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 94.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 94.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 94.2
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 94.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 93.7
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 93.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 93.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 93.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 93.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 93.1
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 92.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 92.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 92.3
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 92.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 91.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 91.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 91.8
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 91.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 90.8
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 90.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 90.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 90.0
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 89.9
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 89.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 89.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 89.2
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 89.1
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 88.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 88.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 88.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 88.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 88.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 87.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 87.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 87.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 87.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 87.0
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 86.8
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 86.6
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 86.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 86.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 86.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 86.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 86.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 85.6
GTEX-183FY-1626-SM-793D8 20-29 years, male 85.6
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 85.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 85.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 85.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 85.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 85.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 84.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 84.4
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 84.4
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 84.3
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 84.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 84.0
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 83.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 83.7
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 83.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 83.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 83.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 83.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 83.2
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 83.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 81.9
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 81.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 81.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 80.8
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 80.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 80.2
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 80.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 80.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 79.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 78.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 78.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 77.6
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 77.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 77.1
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 77.0
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 75.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 75.4
GTEX-144GM-1026-SM-79OKU 20-29 years, male 75.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 74.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 74.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 74.3
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 73.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 72.2
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 71.7
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 71.3
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 69.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 69.2
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 66.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 63.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 62.0
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

128.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 128.4
FF:10024-101D6 15,40,85 years, mixed 128.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org