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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.6 nTPM
HPA Brain:14.4 nTPM
GTEx:44.6 nTPM
FANTOM5:43.7 Scaled Tags Per Million
Pig:66.2 nTPM
Mouse:36.4 nTPM
Allen mouse:3.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007451
Glial cells High
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 12.0
1854 Male, age 80, left hemisphere 16.6
2289 Male, age 61, right hemisphere 15.5
2290 Female, age 72, unknown 12.7
1857 Female, age 85, left hemisphere 10.8
2288 Male, age 75, left hemisphere 10.7
1781 Male, age 74, unknown 10.6
2481 Female, age 94, left hemisphere 9.5
2846 Female, age 79, unknown 9.4
Globus pallidus, externus
nTPM: 9.1
2395 Male, age 75, both hemispheres 11.7
2646 Male, age 61, right hemisphere 11.1
2567 Female, age 72, unknown 8.7
2772 Female, age 79, unknown 7.1
1996 Male, age 80, right hemisphere 7.0
Globus pallidus, internus
nTPM: 7.8
2566 Female, age 72, unknown 9.5
1818 Male, age 74, unknown 9.1
2111 Female, age 85, right hemisphere 9.1
2778 Female, age 91, both hemispheres 7.9
2037 Male, age 80, right hemisphere 7.5
2483 Female, age 94, right hemisphere 6.1
2287 Male, age 75, right hemisphere 5.6
Nucleus accumbens
nTPM: 10.3
2732 Male, age 80, right hemisphere 13.0
1783 Male, age 74, unknown 11.5
1806 Female, age 85, left hemisphere 11.3
1856 Female, age 91, right hemisphere 11.1
2824 Male, age 61, right hemisphere 10.7
2286 Male, age 75, left hemisphere 8.9
2698 Female, age 72, unknown 8.6
2391 Female, age 94, left hemisphere 7.6
Nucleus basalis of Meynert
nTPM: 11.1
2484 Female, age 94, left hemisphere 14.7
2393 Male, age 80, right hemisphere 10.9
2821 Male, age 75, both hemispheres 10.1
2569 Male, age 61, both hemispheres 8.6
Nucleus of the diagonal band
nTPM: 14.4
2029 Male, age 61, right hemisphere 24.8
1979 Male, age 74, unknown 13.3
2775 Male, age 80, right hemisphere 12.7
2195 Female, age 85, both hemispheres 12.3
1812 Female, age 91, both hemispheres 8.8
Putamen
nTPM: 12.4
1937 Female, age 91, right hemisphere 18.7
2489 Female, age 72, unknown 14.1
2466 Female, age 79, unknown 14.0
1838 Male, age 80, right hemisphere 12.1
1829 Male, age 74, unknown 10.4
2647 Male, age 75, left hemisphere 8.8
2482 Female, age 94, left hemisphere 8.6
Septal nuclei
nTPM: 12.5
1960 Male, age 74, unknown 16.0
2059 Female, age 85, both hemispheres 14.5
2009 Female, age 91, both hemispheres 13.4
2199 Male, age 80, right hemisphere 11.7
2031 Female, age 72, unknown 11.6
2629 Female, age 94, right hemisphere 11.6
2394 Male, age 61, left hemisphere 8.8
Stria terminalis, bed nucleus
nTPM: 13.7
2486 Female, age 94, both hemispheres 15.5
2201 Male, age 74, unknown 14.0
1974 Female, age 91, both hemispheres 11.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.6
Samples: 246

Max nTPM: 110.6
Min nTPM: 7.2
Std nTPM: 17.1
Median nTPM: 35.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 110.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 78.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 76.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 75.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 73.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 71.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 71.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 70.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 70.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 66.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 64.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 64.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 63.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 62.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 62.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 62.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 62.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 62.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 60.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 59.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 59.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 58.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 58.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 56.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 55.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 55.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 54.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 53.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 53.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 53.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 53.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 52.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 52.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 52.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 51.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 50.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 50.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 49.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 49.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 48.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 48.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 48.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 48.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 47.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 47.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 47.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 46.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 46.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 46.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 46.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 45.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 44.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 44.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 44.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 44.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 43.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 43.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 43.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 43.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 42.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 42.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 41.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 41.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 41.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 41.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 41.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 41.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 40.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 40.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 40.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 40.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 40.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 40.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 40.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 39.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 39.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 39.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 38.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 38.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 37.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 37.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 37.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 36.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 36.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 36.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 36.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 35.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 35.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 35.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 35.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 35.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 34.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 34.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 33.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 33.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 33.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 33.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 33.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 32.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 32.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 31.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 31.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 31.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 31.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 31.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 30.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 30.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 30.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 30.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 30.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 30.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 29.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 29.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 29.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 29.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 29.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 29.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 29.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 28.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 28.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 28.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 27.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 27.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 27.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 27.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 26.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 26.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 26.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 25.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 25.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 25.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 25.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 25.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 25.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 25.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 24.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 24.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 24.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 24.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 24.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 24.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 23.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 23.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 23.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 23.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 23.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 23.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 23.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 23.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 23.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 22.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 22.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 22.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 22.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 22.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 21.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 21.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 21.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 21.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 21.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 21.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 21.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 21.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 20.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 20.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 20.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 20.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 19.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 19.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 19.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 19.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 19.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 19.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 18.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 18.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 17.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 17.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 16.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 16.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 16.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 16.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 16.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 15.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 15.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 15.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 15.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 15.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 15.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 14.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 14.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 13.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 12.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 11.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 10.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 8.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 8.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 7.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.6
Samples: 246

Max nTPM: 132.8
Min nTPM: 3.8
Std nTPM: 20.3
Median nTPM: 43.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 132.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 110.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 107.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 95.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 89.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 89.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 84.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 84.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 83.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 82.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 82.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 79.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 78.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 77.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 76.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 74.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 74.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 73.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 73.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 72.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 71.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 71.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 71.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 71.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 69.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 69.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 69.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 69.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 68.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 68.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 68.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 68.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 66.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 66.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 64.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 64.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 63.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 62.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 62.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 62.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 61.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 60.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 60.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 59.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 59.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 59.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 59.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 58.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 58.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 57.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 57.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 57.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 57.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 56.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 56.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 55.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 55.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 55.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 54.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 54.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 54.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 53.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 53.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 53.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 53.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 52.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 52.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 52.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 52.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 51.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 51.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 51.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 51.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 50.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 50.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 50.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 50.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 50.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 49.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 49.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 49.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 48.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 48.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 48.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 48.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 48.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 48.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 47.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 47.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 47.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 47.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 47.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 47.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 46.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 46.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 46.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 46.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 46.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 45.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 45.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 45.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 45.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 45.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 45.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 44.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 44.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 44.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 44.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 44.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 44.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 43.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 43.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 43.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 42.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 42.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 42.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 42.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 42.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 42.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 41.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 41.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 40.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 40.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 40.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 40.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 40.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 39.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 39.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 39.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 39.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 39.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 38.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 38.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 38.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 38.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 38.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 37.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 37.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 37.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 36.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 36.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 36.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 36.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 36.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 36.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 35.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 35.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 35.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 34.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 34.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 33.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 33.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 33.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 33.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 32.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 32.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 32.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 32.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 32.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 32.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 31.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 31.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 31.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 31.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 30.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 30.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 30.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 30.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 30.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 29.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 29.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 29.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 28.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 28.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 28.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 28.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 28.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 27.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 27.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 27.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 27.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 26.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 26.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 26.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 26.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 25.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 24.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 24.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 23.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 22.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 22.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 21.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 21.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 20.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 20.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 20.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 19.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 19.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 19.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 19.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 19.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 19.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 19.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 18.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 18.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 18.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 17.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 17.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 17.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 16.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 16.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 15.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 14.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 14.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 13.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 12.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 12.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 11.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 11.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 10.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 8.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 6.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 4.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.8
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Brain - Putamen (basal ganglia)
Average nTPM: 35.6
Samples: 205

Max nTPM: 131.2
Min nTPM: 7.3
Std nTPM: 17.9
Median nTPM: 32.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 131.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 99.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 79.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 79.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 74.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 74.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 74.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 73.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 72.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 71.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 62.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 61.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 60.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 60.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 60.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 60.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 59.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 59.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 58.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 58.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 56.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 54.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 53.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 53.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 52.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 52.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 52.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 52.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 51.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 51.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 50.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 50.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 50.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 50.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 49.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 49.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 48.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 47.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 47.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 46.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 46.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 46.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 45.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 45.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 45.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 45.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 45.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 44.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 43.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 43.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 43.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 43.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 43.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 41.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 41.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 40.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 40.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 40.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 40.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 40.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 40.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 39.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 39.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 39.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 38.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 38.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 37.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 37.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 37.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 37.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 36.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 36.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 36.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 36.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 36.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 36.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 35.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 35.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 35.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 35.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 34.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 34.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 34.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 33.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 33.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 33.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 32.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 32.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 32.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 32.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 31.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 31.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 31.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 31.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 31.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 31.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 31.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 31.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 30.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 30.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 30.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 29.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 29.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 29.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 28.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 28.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 28.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 27.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 27.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 27.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 27.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 27.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 26.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 26.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 26.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 26.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 25.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 25.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 24.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 24.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 24.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 24.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 23.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 23.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 23.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 23.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 23.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 23.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 23.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 22.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 21.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 21.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 21.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 21.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 20.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 20.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 20.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 20.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 20.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 20.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 19.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 19.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 18.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 18.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 18.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 18.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 18.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 18.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 18.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 18.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 17.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 17.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 17.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 16.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 16.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 15.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 15.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 15.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 15.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 14.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 14.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 14.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 14.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 13.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 13.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 12.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 12.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 12.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 12.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 12.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 12.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 11.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 11.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 10.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 8.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

43.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 43.7
FF:10164-103B2 76 years, female 43.7
Nucleus accumbens
Scaled Tags Per Million: 26.9
FF:10037-101F1 23-56 years, mixed 26.9
Putamen
Scaled Tags Per Million: 36.8
FF:10176-103C5 60 years, female 36.8
Globus pallidus
Scaled Tags Per Million: 22.2
FF:10161-103A8 76 years, female 27.2
FF:10175-103C4 60 years, female 17.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.2
Pig sample Sample description nTPM
Caudate
nTPM: 58.6
Samples: 4

Max nTPM: 69.7
Min nTPM: 36.8
Sample A Female 36.8
Sample B Female 69.7
Sample C Male 64.8
Sample D Male 63.1
Putamen
nTPM: 66.2
Samples: 4

Max nTPM: 92.3
Min nTPM: 45.9
Sample A Female 45.9
Sample B Female 68.8
Sample C Male 57.6
Sample D Male 92.3
Septum
nTPM: 36.3
Samples: 4

Max nTPM: 40.9
Min nTPM: 26.5
Sample A Female 40.9
Sample B Female 40.9
Sample C Male 26.5
Sample D Male 36.8
Ventral pallidum
nTPM: 50.6
Samples: 4

Max nTPM: 61.3
Min nTPM: 43.3
Sample A Female 43.3
Sample B Female 49.4
Sample C Male 48.2
Sample D Male 61.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 36.5
Samples: 4

Max nTPM: 37.6
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 37.6
Sample C Female 36.7
Sample D Female 36.9
Septum
nTPM: 32.4
Samples: 4

Max nTPM: 34.6
Min nTPM: 30.3
Sample A Male 34.6
Sample B Male 33.8
Sample C Female 30.8
Sample D Female 30.3
Ventral forebrain
nTPM: 35.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 33.2
Sample A Male 36.7
Sample B Male 33.2
Sample C Female 36.5
Sample D Female 34.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.1
74735277 Antisense, RP_060302_01_D01, Mouse strain C57BL/6J (56 days, male) 3.1
Pallidum
Expression energy: 2.7
74735277 Antisense, RP_060302_01_D01, Mouse strain C57BL/6J (56 days, male) 2.7

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