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L3MBTL1
HPA
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  • L3MBTL1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

L3MBTL1
Synonyms dJ138B7.3, DKFZp586P1522, KIAA0681, L3MBTL, ZC2HC3
Gene descriptioni

Full gene name according to HGNC.

L3MBTL histone methyl-lysine binding protein 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transcription factors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband
Chromosome location (bp) 43489442 - 43550954
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000185513 (version 109)
Entrez gene 26013
HGNC HGNC:15905
UniProt Q9Y468 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y468
GeneCards L3MBTL1
Antibodypedia L3MBTL1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Polycomb group (PcG) protein that specifically recognizes and binds mono- and dimethyllysine residues on target proteins, therey acting as a 'reader' of a network of post-translational modifications. PcG proteins maintain the transcriptionally repressive state of genes: acts as a chromatin compaction factor by recognizing and binding mono- and dimethylated histone H1b/H1-4 at 'Lys-26' (H1bK26me1 and H1bK26me2) and histone H4 at 'Lys-20' (H4K20me1 and H4K20me2), leading to condense chromatin and repress transcription. Recognizes and binds p53/TP53 monomethylated at 'Lys-382', leading to repress p53/TP53-target genes. Also recognizes and binds RB1/RB monomethylated at 'Lys-860'. Participates in the ETV6-mediated repression. Probably plays a role in cell proliferation. Overexpression induces multinucleated cells, suggesting that it is required to accomplish normal mitosis.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chromatin regulator, Repressor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transcription, Transcription regulation
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene represents a polycomb group gene. The encoded protein functions to regulate gene activity, likely via chromatin modification. The encoded protein may also be necessary for mitosis. Alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, Sep 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
L3MBTL1-202
ENSP00000362226
ENST00000373134
A0A0A0MRR4
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
743 aa
83 kDa
No 0
L3MBTL1-203
ENSP00000362227
ENST00000373135
Q9Y468
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0000793 [condensed chromosome]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0007088 [regulation of mitotic nuclear division]
GO:0008270 [zinc ion binding]
GO:0030097 [hemopoiesis]
GO:0031491 [nucleosome binding]
GO:0031507 [heterochromatin formation]
GO:0032093 [SAM domain binding]
GO:0035064 [methylated histone binding]
GO:0042393 [histone binding]
GO:0042802 [identical protein binding]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0061793 [chromatin lock complex]
Show all
772 aa
85.9 kDa
No 0
L3MBTL1-204
ENSP00000398516
ENST00000418998
A0A3F2YNZ1
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
862 aa
94.7 kDa
No 0
L3MBTL1-205
ENSP00000410139
ENST00000422861
Q9Y468
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0000793 [condensed chromosome]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0007088 [regulation of mitotic nuclear division]
GO:0008270 [zinc ion binding]
GO:0030097 [hemopoiesis]
GO:0031491 [nucleosome binding]
GO:0031507 [heterochromatin formation]
GO:0032093 [SAM domain binding]
GO:0035064 [methylated histone binding]
GO:0042393 [histone binding]
GO:0042802 [identical protein binding]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0061793 [chromatin lock complex]
Show all
752 aa
83.9 kDa
No 0
L3MBTL1-206
ENSP00000402107
ENST00000427442
Q9Y468
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Transcription factors
   Zinc-coordinating DNA-binding domains
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000785 [chromatin]
GO:0000793 [condensed chromosome]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0007088 [regulation of mitotic nuclear division]
GO:0008270 [zinc ion binding]
GO:0030097 [hemopoiesis]
GO:0031491 [nucleosome binding]
GO:0031507 [heterochromatin formation]
GO:0032093 [SAM domain binding]
GO:0035064 [methylated histone binding]
GO:0042393 [histone binding]
GO:0042802 [identical protein binding]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0046872 [metal ion binding]
GO:0051726 [regulation of cell cycle]
GO:0061793 [chromatin lock complex]
Show all
840 aa
92.3 kDa
No 0
L3MBTL1-208
ENSP00000415971
ENST00000434666
B0QYN5
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
Show all
712 aa
79.4 kDa
No 0
L3MBTL1-226
ENSP00000497122
ENST00000649084
A0A3B3IS65
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
497 aa
56 kDa
No 0
L3MBTL1-229
ENSP00000497566
ENST00000649917
A0A3B3ISS0
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006325 [chromatin organization]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
821 aa
90.3 kDa
No 0
L3MBTL1-231
ENSP00000497199
ENST00000650349
A0A3B3ISB7
[Direct mapping] Lethal(3)malignant brain tumor-like protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005634 [nucleus]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
GO:0046872 [metal ion binding]
Show all
203 aa
22.2 kDa
No 0
L3MBTL1-233
ENSP00000516063
ENST00000704961
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of DNA-templated transcription]
GO:0008270 [zinc ion binding]
Show all
842 aa
92.6 kDa
No 0

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