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PDE6G
HPA
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  • PDE6G
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PDE6G
Synonyms PDEG, RP57
Gene descriptioni

Full gene name according to HGNC.

Phosphodiesterase 6G
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q25.3
Chromosome location (bp) 81650459 - 81663112
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000185527 (version 109)
Entrez gene 5148
HGNC HGNC:8789
UniProt P18545 (UniProt - Evidence at protein level)
neXtProt NX_P18545
GeneCards PDE6G
Antibodypedia PDE6G antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Participates in processes of transmission and amplification of the visual signal. cGMP-PDEs are the effector molecules in G-protein-mediated phototransduction in vertebrate rods and cones.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Sensory transduction, Vision
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

cGMP
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes the gamma subunit of cyclic GMP-phosphodiesterase, which is composed of alpha- and beta- catalytic subunits and two identical, inhibitory gamma subunits. This gene is expressed in rod photoreceptors and functions in the phototransduction signaling cascade. It is also expressed in a variety of other tissues, and has been shown to regulate the c-Src protein kinase and G-protein-coupled receptor kinase 2. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PDE6G-201
ENSP00000328412
ENST00000331056
P18545
[Direct mapping] Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0004114 [3',5'-cyclic-nucleotide phosphodiesterase activity]
GO:0004857 [enzyme inhibitor activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0007601 [visual perception]
GO:0016787 [hydrolase activity]
GO:0030507 [spectrin binding]
GO:0030553 [cGMP binding]
GO:0042622 [photoreceptor outer segment membrane]
GO:0043410 [positive regulation of MAPK cascade]
GO:0045742 [positive regulation of epidermal growth factor receptor signaling pathway]
GO:0045745 [positive regulation of G protein-coupled receptor signaling pathway]
GO:0047555 [3',5'-cyclic-GMP phosphodiesterase activity]
GO:0050896 [response to stimulus]
GO:0097381 [photoreceptor disc membrane]
Show all
87 aa
9.6 kDa
No 0
PDE6G-202
ENSP00000461464
ENST00000571004
P18545
[Direct mapping] Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0004114 [3',5'-cyclic-nucleotide phosphodiesterase activity]
GO:0004857 [enzyme inhibitor activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0007601 [visual perception]
GO:0016787 [hydrolase activity]
GO:0030553 [cGMP binding]
GO:0042622 [photoreceptor outer segment membrane]
GO:0045742 [positive regulation of epidermal growth factor receptor signaling pathway]
GO:0045745 [positive regulation of G protein-coupled receptor signaling pathway]
GO:0047555 [3',5'-cyclic-GMP phosphodiesterase activity]
GO:0050896 [response to stimulus]
GO:0097381 [photoreceptor disc membrane]
Show all
87 aa
9.6 kDa
No 0
PDE6G-203
ENSP00000458167
ENST00000571224
P18545
[Direct mapping] Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Eye disease
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0004114 [3',5'-cyclic-nucleotide phosphodiesterase activity]
GO:0004857 [enzyme inhibitor activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0007601 [visual perception]
GO:0016787 [hydrolase activity]
GO:0030553 [cGMP binding]
GO:0042622 [photoreceptor outer segment membrane]
GO:0045742 [positive regulation of epidermal growth factor receptor signaling pathway]
GO:0045745 [positive regulation of G protein-coupled receptor signaling pathway]
GO:0047555 [3',5'-cyclic-GMP phosphodiesterase activity]
GO:0050896 [response to stimulus]
GO:0097381 [photoreceptor disc membrane]
Show all
87 aa
9.6 kDa
No 0

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