HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:29.2 nTPM
HPA Brain:265.4 nTPM
GTEx:29.2 nTPM
FANTOM5:87.8 Scaled Tags Per Million
Pig:183.3 nTPM
Mouse:126.5 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 265.4
Sample id Sample description nTPM
Hippocampus
nTPM: 232.6
1898 Male, age 80, left hemisphere 250.5
2148 Female, age 91, left hemisphere 248.4
2621 Female, age 67, right hemisphere 234.0
1855 Male, age 76, left hemisphere 231.0
1911 Female, age 85, right hemisphere 229.7
2529 Female, age 94, left hemisphere 202.3
Dentate gyrus
nTPM: 219.9
1927 Female, age 91, both hemispheres 278.0
2010 Male, age 76, both hemispheres 236.7
2246 Female, age 85, both hemispheres 227.4
2528 Male, age 74, both hemispheres 211.6
2531 Female, age 67, both hemispheres 197.5
2530 Female, age 94, left hemisphere 168.4
Entorhinal gyrus
nTPM: 186.8
1938 Female, age 85, left hemisphere 229.9
2117 Female, age 91, right hemisphere 185.3
2613 Female, age 94, left hemisphere 180.5
1787 Male, age 76, left hemisphere 178.3
2764 Male, age 80, right hemisphere 175.8
2686 Male, age 75, right hemisphere 171.1
Hippocampus, CA1
nTPM: 265.4
2749 Male, age 80, left hemisphere 364.7
2527 Male, age 74, both hemispheres 271.0
1873 Female, age 85, both hemispheres 267.0
2045 Male, age 76, both hemispheres 226.2
2082 Female, age 91, right hemisphere 198.2
Hippocampus, CA2
nTPM: 214.4
1892 Male, age 76, both hemispheres 259.0
1963 Male, age 80, left hemisphere 250.2
2249 Male, age 74, both hemispheres 212.8
2113 Female, age 91, right hemisphere 209.9
1940 Female, age 85, left hemisphere 179.6
2437 Female, age 94, left hemisphere 174.9
Hippocampus, CA3
nTPM: 229.4
2137 Male, age 80, left hemisphere 305.7
2620 Female, age 94, left hemisphere 238.5
2436 Male, age 74, both hemispheres 219.6
1867 Male, age 76, both hemispheres 207.1
1891 Female, age 85, both hemispheres 206.6
2861 Female, age 67, both hemispheres 198.8
Parahippocampal cortex
nTPM: 203.9
2692 Male, age 74, both hemispheres 227.0
1850 Male, age 80, both hemispheres 224.9
2245 Female, age 91, both hemispheres 224.5
2622 Female, age 67, right hemisphere 222.7
2250 Female, age 67, right hemisphere 210.0
2693 Female, age 94, both hemispheres 199.4
1990 Female, age 91, right hemisphere 195.9
1933 Female, age 85, both hemispheres 193.2
2532 Female, age 72, left hemisphere 171.7
2018 Male, age 76, both hemispheres 169.2
Perirhinal gyrus
nTPM: 205.3
1847 Female, age 91, left hemisphere 230.6
1841 Female, age 85, right hemisphere 211.3
1794 Male, age 80, right hemisphere 206.1
2521 Female, age 94, right hemisphere 194.1
2848 Male, age 76, right hemisphere 184.7
Subiculum
nTPM: 207.6
2619 Male, age 74, both hemispheres 221.8
1901 Male, age 80, both hemispheres 219.4
2438 Female, age 94, left hemisphere 219.4
2729 Female, age 91, right hemisphere 218.8
1977 Female, age 85, both hemispheres 185.5
2042 Male, age 76, both hemispheres 180.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.2
Samples: 197

Max nTPM: 56.6
Min nTPM: 10.0
Std nTPM: 8.4
Median nTPM: 29.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 56.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 47.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 47.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 47.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 45.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 44.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 43.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 87.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.8
FF:10153-102I9 76 years, female 115.4
FF:10169-103B7 60 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 183.3
Pig sample Sample description nTPM
Subiculum
nTPM: 145.6
Samples: 4

Max nTPM: 168.5
Min nTPM: 134.8
Sample A Female 168.5
Sample B Female 134.8
Sample C Male 142.0
Sample D Male 137.1
Dorsal hippocampus
nTPM: 177.5
Samples: 4

Max nTPM: 201.2
Min nTPM: 145.2
Sample A Female 201.2
Sample B Female 196.5
Sample C Male 145.2
Sample D Male 167.1
Entorhinal cortex
nTPM: 125.2
Samples: 4

Max nTPM: 126.8
Min nTPM: 122.7
Sample A Female 125.9
Sample B Female 125.5
Sample C Male 122.7
Sample D Male 126.8
Ventral hippocampus
nTPM: 183.3
Samples: 4

Max nTPM: 202.2
Min nTPM: 148.5
Sample A Female 202.2
Sample B Female 148.5
Sample C Male 201.0
Sample D Male 181.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 126.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.3
Samples: 4

Max nTPM: 112.3
Min nTPM: 91.1
Sample A Male 105.6
Sample B Male 91.1
Sample C Female 112.1
Sample D Female 112.3
Hippocampal formation
nTPM: 126.5
Samples: 4

Max nTPM: 135.9
Min nTPM: 115.2
Sample A Male 122.8
Sample B Male 135.9
Sample C Female 132.1
Sample D Female 115.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
626 Antisense, RP_Baylor_103406, Mouse strain C57BL/6J (56 days, male) 1.4
625 Antisense, RP_Baylor_103406, Mouse strain C57BL/6J (56 days, male) 1.2

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