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NTF3
HPA
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  • NTF3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NTF3
Synonyms NGF2
Gene descriptioni

Full gene name according to HGNC.

Neurotrophin 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
RAS pathway related proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband p13.31
Chromosome location (bp) 5432108 - 5521536
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000185652 (version 109)
Entrez gene 4908
HGNC HGNC:8023
UniProt P20783 (UniProt - Evidence at protein level)
neXtProt NX_P20783
GeneCards NTF3
Antibodypedia NTF3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Seems to promote the survival of visceral and proprioceptive sensory neurons.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Growth factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the neurotrophin family, that controls survival and differentiation of mammalian neurons. This protein is closely related to both nerve growth factor and brain-derived neurotrophic factor. It may be involved in the maintenance of the adult nervous system, and may affect development of neurons in the embryo when it is expressed in human placenta. NTF3-deficient mice generated by gene targeting display severe movement defects of the limbs. The mature peptide of this protein is identical in all mammals examined including human, pig, rat and mouse. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NTF3-201
ENSP00000328738
ENST00000331010
P20783
[Direct mapping] Neurotrophin-3
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002092 [positive regulation of receptor internalization]
GO:0005102 [signaling receptor binding]
GO:0005163 [nerve growth factor receptor binding]
GO:0005165 [neurotrophin receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007422 [peripheral nervous system development]
GO:0007613 [memory]
GO:0008021 [synaptic vesicle]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0021675 [nerve development]
GO:0030335 [positive regulation of cell migration]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0032148 [activation of protein kinase B activity]
GO:0033138 [positive regulation of peptidyl-serine phosphorylation]
GO:0038180 [nerve growth factor signaling pathway]
GO:0042056 [chemoattractant activity]
GO:0042981 [regulation of apoptotic process]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0045664 [regulation of neuron differentiation]
GO:0048812 [neuron projection morphogenesis]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0050732 [negative regulation of peptidyl-tyrosine phosphorylation]
GO:0050804 [modulation of chemical synaptic transmission]
GO:0050918 [positive chemotaxis]
GO:0050930 [induction of positive chemotaxis]
GO:0090630 [activation of GTPase activity]
GO:2000251 [positive regulation of actin cytoskeleton reorganization]
Show all
257 aa
29.4 kDa
Yes 0
NTF3-202
ENSP00000397297
ENST00000423158
P20783
[Direct mapping] Neurotrophin-3
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
RAS pathway related proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002092 [positive regulation of receptor internalization]
GO:0005102 [signaling receptor binding]
GO:0005163 [nerve growth factor receptor binding]
GO:0005165 [neurotrophin receptor binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007165 [signal transduction]
GO:0007169 [transmembrane receptor protein tyrosine kinase signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007422 [peripheral nervous system development]
GO:0007613 [memory]
GO:0008021 [synaptic vesicle]
GO:0008083 [growth factor activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0021675 [nerve development]
GO:0030335 [positive regulation of cell migration]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0032148 [activation of protein kinase B activity]
GO:0033138 [positive regulation of peptidyl-serine phosphorylation]
GO:0038180 [nerve growth factor signaling pathway]
GO:0042056 [chemoattractant activity]
GO:0042981 [regulation of apoptotic process]
GO:0043406 [positive regulation of MAP kinase activity]
GO:0043524 [negative regulation of neuron apoptotic process]
GO:0045664 [regulation of neuron differentiation]
GO:0048812 [neuron projection morphogenesis]
GO:0050731 [positive regulation of peptidyl-tyrosine phosphorylation]
GO:0050732 [negative regulation of peptidyl-tyrosine phosphorylation]
GO:0050804 [modulation of chemical synaptic transmission]
GO:0050918 [positive chemotaxis]
GO:0050930 [induction of positive chemotaxis]
GO:0090630 [activation of GTPase activity]
GO:2000251 [positive regulation of actin cytoskeleton reorganization]
Show all
270 aa
30.8 kDa
Yes 0

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