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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:92.8 nTPM

THALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.8
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 92.8
2497 Male, age 66, unknown 99.5
2032 Female, age 42, unknown 91.0
2396 Male, age 61, right hemisphere 87.9
Centromedial thalamic nucleus
nTPM: 92.4
2401 Male, age 76, right hemisphere 94.1
2279 Female, age 85, left hemisphere 90.7
Habenula
nTPM: 66.2
2276 Male, age 66, unknown 81.1
2252 Male, age 62, unknown 71.3
1957 Male, age 80, both hemispheres 56.4
2203 Male, age 61, left hemisphere 55.9
Lateral geniculate body
nTPM: 86.2
2575 Female, age 94, right hemisphere 136.7
2857 Male, age 74, right hemisphere 96.3
2659 Male, age 66, unknown 91.1
2035 Female, age 72, unknown 81.8
2841 Male, age 80, both hemispheres 81.5
1953 Male, age 62, unknown 73.4
2399 Male, age 61, left hemisphere 66.6
2106 Female, age 67, right hemisphere 62.1
Lateral thalamic nuclei
nTPM: 81.4
2661 Female, age 72, unknown 104.3
1903 Male, age 76, left hemisphere 89.1
2577 Male, age 74, both hemispheres 77.5
2573 Female, age 94, left hemisphere 73.2
2765 Female, age 67, both hemispheres 62.7
Medial dorsal thalamic nucleus
nTPM: 77.3
2572 Female, age 94, right hemisphere 122.4
2660 Female, age 72, unknown 98.8
2039 Female, age 72, unknown 80.9
2402 Female, age 67, both hemispheres 80.7
2576 Male, age 74, both hemispheres 80.4
2492 Male, age 75, right hemisphere 79.2
1930 Female, age 42, unknown 76.2
2498 Male, age 66, unknown 74.2
2283 Male, age 80, right hemisphere 72.3
1859 Male, age 76, both hemispheres 71.5
2026 Male, age 62, unknown 69.6
1971 Male, age 61, right hemisphere 50.2
1810 Male, age 48, unknown 47.8
Medial geniculate body
nTPM: 74.3
2217 Female, age 72, unknown 87.4
2650 Female, age 94, left hemisphere 79.9
2657 Male, age 74, right hemisphere 79.1
2049 Male, age 76, both hemispheres 76.5
1811 Female, age 42, unknown 74.4
2207 Male, age 80, right hemisphere 73.9
2571 Male, age 75, right hemisphere 49.0
Nucleus reuniens
nTPM: 71.4
2210 Female, age 85, left hemisphere 82.4
2212 Female, age 67, left hemisphere 66.9
2205 Male, age 80, left hemisphere 65.0
Nucleus rhomboideus
nTPM: 79.5
2213 Female, age 67, left hemisphere 91.1
2280 Female, age 85, left hemisphere 86.2
2206 Male, age 80, both hemispheres 61.0
Posterior thalamic nucleus
nTPM: 83.0
2266 Male, age 76, right hemisphere 89.0
2495 Female, age 67, right hemisphere 85.6
2649 Female, age 94, both hemispheres 79.5
2655 Male, age 74, right hemisphere 77.8
Pulvinar
nTPM: 78.7
1899 Female, age 42, unknown 97.0
1929 Male, age 48, unknown 90.1
2496 Female, age 67, right hemisphere 89.4
2214 Male, age 76, right hemisphere 82.8
2724 Male, age 74, right hemisphere 80.0
2582 Female, age 72, unknown 78.9
1932 Male, age 80, right hemisphere 73.2
2499 Male, age 66, unknown 71.0
1972 Male, age 62, unknown 65.4
2398 Male, age 61, left hemisphere 58.8
Subthalamic nucleus
nTPM: 78.6
2216 Male, age 48, unknown 102.7
2658 Male, age 74, both hemispheres 90.2
2056 Female, age 72, unknown 78.1
2779 Female, age 42, unknown 78.1
2275 Male, age 66, unknown 76.3
2406 Female, age 72, unknown 73.8
2282 Male, age 61, both hemispheres 69.4
2124 Male, age 62, unknown 59.9
Ventral posterolateral thalamic nucleus
nTPM: 76.7
2581 Female, age 72, unknown 116.0
2570 Male, age 75, right hemisphere 90.2
2578 Male, age 74, both hemispheres 67.2
2197 Male, age 80, both hemispheres 64.0
2740 Male, age 76, right hemisphere 63.7
2397 Male, age 61, right hemisphere 59.0
Ventral posteromedial thalamic nucleus
nTPM: 70.8
2127 Male, age 76, right hemisphere 92.8
2653 Male, age 74, both hemispheres 82.9
2758 Male, age 80, both hemispheres 66.0
2281 Male, age 75, right hemisphere 58.4
2202 Male, age 61, left hemisphere 53.9
Ventral thalamic nuclei
nTPM: 78.9
2858 Female, age 72, unknown 93.2
2580 Male, age 66, unknown 82.5
1845 Male, age 48, unknown 80.7
1860 Male, age 76, both hemispheres 78.1
2652 Male, age 74, left hemisphere 77.3
2204 Male, age 80, both hemispheres 77.1
1912 Female, age 42, unknown 75.9
2285 Male, age 62, unknown 75.3
2291 Female, age 72, unknown 69.6
Zona incerta
nTPM: 89.8
2822 Male, age 74, right hemisphere 101.8
2403 Male, age 62, unknown 100.5
2663 Female, age 72, unknown 88.4
2215 Male, age 66, unknown 81.0
2208 Male, age 80, right hemisphere 77.3

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