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TRDN
HPA
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  • TRDN
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TRDN
Synonyms TRISK
Gene descriptioni

Full gene name according to HGNC.

Triadin
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband q22.31
Chromosome location (bp) 123216339 - 123637093
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000186439 (version 109)
Entrez gene 10345
HGNC HGNC:12261
UniProt Q13061 (UniProt - Evidence at protein level)
neXtProt NX_Q13061
GeneCards TRDN
Antibodypedia TRDN antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Contributes to the regulation of lumenal Ca2+ release via the sarcoplasmic reticulum calcium release channels RYR1 and RYR2, a key step in triggering skeletal and heart muscle contraction. Required for normal organization of the triad junction, where T-tubules and the sarcoplasmic reticulum terminal cisternae are in close contact (By similarity). Required for normal skeletal muscle strength. Plays a role in excitation-contraction coupling in the heart and in regulating the rate of heart beats.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes an integral membrane protein found in skeletal and cardiac muscle. The encoded protein plays a role in skeletal muscle excitation-contraction coupling as part of the calcium release complex and is required for normal skeletal muscle strength. This protein indirectly links triads and microtubules in skeletal muscle. Mutations in this gene are associated with cardiac arrythmia syndrome and some variants in this gene may be associated with sudden cardiac death. [provided by RefSeq, May 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TRDN-201
ENSP00000333984
ENST00000334268
Q13061
[Direct mapping] Triadin
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006874 [cellular calcium ion homeostasis]
GO:0006936 [muscle contraction]
GO:0009617 [response to bacterium]
GO:0010649 [regulation of cell communication by electrical coupling]
GO:0010880 [regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0014701 [junctional sarcoplasmic reticulum membrane]
GO:0014808 [release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016529 [sarcoplasmic reticulum]
GO:0030314 [junctional membrane complex]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0031122 [cytoplasmic microtubule organization]
GO:0033017 [sarcoplasmic reticulum membrane]
GO:0033018 [sarcoplasmic reticulum lumen]
GO:0044325 [transmembrane transporter binding]
GO:0051279 [regulation of release of sequestered calcium ion into cytosol]
GO:0051649 [establishment of localization in cell]
GO:0060047 [heart contraction]
GO:0060315 [negative regulation of ryanodine-sensitive calcium-release channel activity]
GO:0060316 [positive regulation of ryanodine-sensitive calcium-release channel activity]
GO:0086036 [regulation of cardiac muscle cell membrane potential]
GO:0090158 [endoplasmic reticulum membrane organization]
GO:1901846 [positive regulation of cell communication by electrical coupling involved in cardiac conduction]
Show all
729 aa
81.6 kDa
No 1
TRDN-202
ENSP00000354307
ENST00000361029
H7BY47
[Direct mapping] Triadin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
GO:0005102 [signaling receptor binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016529 [sarcoplasmic reticulum]
GO:0033017 [sarcoplasmic reticulum membrane]
Show all
151 aa
17.2 kDa
No 0
TRDN-203
ENSP00000406768
ENST00000422596
H0Y6P0
[Direct mapping] Triadin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Show all
44 aa
5.1 kDa
No 0
TRDN-204
ENSP00000437684
ENST00000542443
Q13061
[Direct mapping] Triadin
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006874 [cellular calcium ion homeostasis]
GO:0006936 [muscle contraction]
GO:0010649 [regulation of cell communication by electrical coupling]
GO:0010880 [regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0014701 [junctional sarcoplasmic reticulum membrane]
GO:0014808 [release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016529 [sarcoplasmic reticulum]
GO:0030314 [junctional membrane complex]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0031122 [cytoplasmic microtubule organization]
GO:0033017 [sarcoplasmic reticulum membrane]
GO:0033018 [sarcoplasmic reticulum lumen]
GO:0044325 [transmembrane transporter binding]
GO:0051279 [regulation of release of sequestered calcium ion into cytosol]
GO:0060047 [heart contraction]
GO:0060315 [negative regulation of ryanodine-sensitive calcium-release channel activity]
GO:0060316 [positive regulation of ryanodine-sensitive calcium-release channel activity]
GO:0086036 [regulation of cardiac muscle cell membrane potential]
GO:0090158 [endoplasmic reticulum membrane organization]
GO:1901846 [positive regulation of cell communication by electrical coupling involved in cardiac conduction]
Show all
167 aa
18.5 kDa
No 1
TRDN-205
ENSP00000439281
ENST00000546248
H9ME53
[Direct mapping] Triadin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016529 [sarcoplasmic reticulum]
GO:0033017 [sarcoplasmic reticulum membrane]
Show all
286 aa
32.1 kDa
No 1
TRDN-206
ENSP00000486095
ENST00000628709
Q13061
[Direct mapping] Triadin
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006874 [cellular calcium ion homeostasis]
GO:0006936 [muscle contraction]
GO:0010649 [regulation of cell communication by electrical coupling]
GO:0010880 [regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0014701 [junctional sarcoplasmic reticulum membrane]
GO:0014808 [release of sequestered calcium ion into cytosol by sarcoplasmic reticulum]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016529 [sarcoplasmic reticulum]
GO:0030314 [junctional membrane complex]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0031122 [cytoplasmic microtubule organization]
GO:0033017 [sarcoplasmic reticulum membrane]
GO:0033018 [sarcoplasmic reticulum lumen]
GO:0044325 [transmembrane transporter binding]
GO:0051279 [regulation of release of sequestered calcium ion into cytosol]
GO:0060047 [heart contraction]
GO:0060315 [negative regulation of ryanodine-sensitive calcium-release channel activity]
GO:0060316 [positive regulation of ryanodine-sensitive calcium-release channel activity]
GO:0086036 [regulation of cardiac muscle cell membrane potential]
GO:0090158 [endoplasmic reticulum membrane organization]
GO:1901846 [positive regulation of cell communication by electrical coupling involved in cardiac conduction]
Show all
297 aa
33.2 kDa
No 1
TRDN-207
ENSP00000499585
ENST00000662930
A0A590UJV0
[Direct mapping] Triadin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Cardiac diseases
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005102 [signaling receptor binding]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016529 [sarcoplasmic reticulum]
GO:0033017 [sarcoplasmic reticulum membrane]
Show all
461 aa
51.6 kDa
No 1

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