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TMPRSS6
HPA
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  • TMPRSS6
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TMPRSS6
Synonyms FLJ30744, MT2
Gene descriptioni

Full gene name according to HGNC.

Transmembrane serine protease 6
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q12.3
Chromosome location (bp) 37065436 - 37109713
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000187045 (version 109)
Entrez gene 164656
HGNC HGNC:16517
UniProt Q8IU80 (UniProt - Evidence at protein level)
neXtProt NX_Q8IU80
GeneCards TMPRSS6
Antibodypedia TMPRSS6 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Membrane-bound serine protease 1, 2, 3, 4. Through the cleavage of cell surface HJV, a regulator of the expression of the iron absorption-regulating hormone hepicidin/HAMP, plays a role in iron homeostasis 5, 6, 7.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Protease, Serine protease
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a type II transmembrane serine proteinase that is found attached to the cell surface. The encoded protein may be involved in matrix remodeling processes in the liver. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TMPRSS6-201
ENSP00000334962
ENST00000346753
Q8IU80
[Direct mapping] Transmembrane protease serine 6
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0004222 [metalloendopeptidase activity]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005886 [plasma membrane]
GO:0006508 [proteolysis]
GO:0006879 [cellular iron ion homeostasis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0022617 [extracellular matrix disassembly]
GO:0030574 [collagen catabolic process]
GO:0033619 [membrane protein proteolysis]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0055072 [iron ion homeostasis]
GO:0097264 [self proteolysis]
Show all
802 aa
88.9 kDa
No 1
TMPRSS6-202
ENSP00000371211
ENST00000381792
Q8IU80
[Direct mapping] Transmembrane protease serine 6
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0004222 [metalloendopeptidase activity]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005886 [plasma membrane]
GO:0006508 [proteolysis]
GO:0006879 [cellular iron ion homeostasis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0022617 [extracellular matrix disassembly]
GO:0030574 [collagen catabolic process]
GO:0033619 [membrane protein proteolysis]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0055072 [iron ion homeostasis]
GO:0097264 [self proteolysis]
Show all
824 aa
91.3 kDa
No 1
TMPRSS6-203
ENSP00000385453
ENST00000406725
Q8IU80
[Direct mapping] Transmembrane protease serine 6
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0004222 [metalloendopeptidase activity]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005886 [plasma membrane]
GO:0006508 [proteolysis]
GO:0006879 [cellular iron ion homeostasis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0022617 [extracellular matrix disassembly]
GO:0030574 [collagen catabolic process]
GO:0033619 [membrane protein proteolysis]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0055072 [iron ion homeostasis]
GO:0097264 [self proteolysis]
Show all
802 aa
88.9 kDa
No 1
TMPRSS6-204
ENSP00000384964
ENST00000406856
Q8IU80
[Direct mapping] Transmembrane protease serine 6
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0004222 [metalloendopeptidase activity]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005886 [plasma membrane]
GO:0006508 [proteolysis]
GO:0006879 [cellular iron ion homeostasis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0022617 [extracellular matrix disassembly]
GO:0030574 [collagen catabolic process]
GO:0033619 [membrane protein proteolysis]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0055072 [iron ion homeostasis]
GO:0097264 [self proteolysis]
Show all
824 aa
91.3 kDa
No 1
TMPRSS6-205
ENSP00000400317
ENST00000423761
B0QYB6
[Direct mapping] Transmembrane protease serine 6
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
141 aa
15.4 kDa
No 1
TMPRSS6-206
ENSP00000392433
ENST00000429068
B0QYB3
[Direct mapping] Transmembrane protease serine 6
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
71 aa
8.4 kDa
No 0
TMPRSS6-207
ENSP00000397691
ENST00000442782
X6REP5
[Direct mapping] Transmembrane protease serine 6
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
452 aa
50.5 kDa
No 1
TMPRSS6-208
ENSP00000501573
ENST00000676104
Q8IU80
[Direct mapping] Transmembrane protease serine 6
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0004222 [metalloendopeptidase activity]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005615 [extracellular space]
GO:0005886 [plasma membrane]
GO:0006508 [proteolysis]
GO:0006879 [cellular iron ion homeostasis]
GO:0008233 [peptidase activity]
GO:0008236 [serine-type peptidase activity]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0022617 [extracellular matrix disassembly]
GO:0030509 [BMP signaling pathway]
GO:0030514 [negative regulation of BMP signaling pathway]
GO:0030574 [collagen catabolic process]
GO:0033619 [membrane protein proteolysis]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0055072 [iron ion homeostasis]
GO:0097264 [self proteolysis]
Show all
802 aa
88.9 kDa
No 1

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