HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:35.4 nTPM
HPA Brain:69.2 nTPM
GTEx:35.4 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:23.4 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 69.2
Sample id Sample description nTPM
Hippocampus
nTPM: 34.0
1898 Male, age 80, left hemisphere 40.8
1855 Male, age 76, left hemisphere 39.9
2529 Female, age 94, left hemisphere 38.1
2621 Female, age 67, right hemisphere 30.8
1911 Female, age 85, right hemisphere 27.4
2148 Female, age 91, left hemisphere 26.9
Dentate gyrus
nTPM: 38.0
2530 Female, age 94, left hemisphere 52.2
2246 Female, age 85, both hemispheres 50.5
2010 Male, age 76, both hemispheres 38.8
2528 Male, age 74, both hemispheres 32.2
2531 Female, age 67, both hemispheres 30.1
1927 Female, age 91, both hemispheres 24.1
Entorhinal gyrus
nTPM: 69.2
2613 Female, age 94, left hemisphere 102.3
2764 Male, age 80, right hemisphere 91.2
1787 Male, age 76, left hemisphere 64.4
2686 Male, age 75, right hemisphere 56.1
1938 Female, age 85, left hemisphere 55.2
2117 Female, age 91, right hemisphere 46.2
Hippocampus, CA1
nTPM: 35.1
2082 Female, age 91, right hemisphere 44.0
2045 Male, age 76, both hemispheres 37.8
2527 Male, age 74, both hemispheres 35.1
2749 Male, age 80, left hemisphere 29.6
1873 Female, age 85, both hemispheres 29.2
Hippocampus, CA2
nTPM: 39.8
2437 Female, age 94, left hemisphere 51.5
1940 Female, age 85, left hemisphere 45.2
1892 Male, age 76, both hemispheres 39.5
2249 Male, age 74, both hemispheres 35.9
2113 Female, age 91, right hemisphere 35.2
1963 Male, age 80, left hemisphere 31.2
Hippocampus, CA3
nTPM: 25.6
1867 Male, age 76, both hemispheres 35.1
2861 Female, age 67, both hemispheres 29.8
2137 Male, age 80, left hemisphere 28.4
1891 Female, age 85, both hemispheres 27.7
2436 Male, age 74, both hemispheres 19.9
2620 Female, age 94, left hemisphere 12.8
Parahippocampal cortex
nTPM: 53.3
1933 Female, age 85, both hemispheres 62.2
2532 Female, age 72, left hemisphere 60.5
2018 Male, age 76, both hemispheres 58.3
1850 Male, age 80, both hemispheres 57.1
2693 Female, age 94, both hemispheres 54.1
2622 Female, age 67, right hemisphere 52.9
2692 Male, age 74, both hemispheres 50.0
1990 Female, age 91, right hemisphere 48.5
2245 Female, age 91, both hemispheres 47.3
2250 Female, age 67, right hemisphere 42.4
Perirhinal gyrus
nTPM: 63.0
2521 Female, age 94, right hemisphere 94.6
1794 Male, age 80, right hemisphere 68.7
1847 Female, age 91, left hemisphere 55.4
2848 Male, age 76, right hemisphere 52.1
1841 Female, age 85, right hemisphere 44.2
Subiculum
nTPM: 46.2
1977 Female, age 85, both hemispheres 63.6
2619 Male, age 74, both hemispheres 47.3
2438 Female, age 94, left hemisphere 45.9
2042 Male, age 76, both hemispheres 42.7
1901 Male, age 80, both hemispheres 42.2
2729 Female, age 91, right hemisphere 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 110.9
Min nTPM: 3.2
Std nTPM: 15.6
Median nTPM: 34.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 110.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 89.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 86.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.4
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 74.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 73.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 70.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 68.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 65.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 64.8
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 61.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.5
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 27.0
Pig sample Sample description nTPM
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 18.4
Min nTPM: 9.1
Sample A Female 18.4
Sample B Female 11.2
Sample C Male 9.1
Sample D Male 13.9
Dorsal hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.9
Sample A Female 9.6
Sample B Female 9.8
Sample C Male 7.9
Sample D Male 8.8
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 31.7
Min nTPM: 21.3
Sample A Female 26.1
Sample B Female 31.7
Sample C Male 28.8
Sample D Male 21.3
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 16.0
Min nTPM: 8.8
Sample A Female 14.7
Sample B Female 11.4
Sample C Male 16.0
Sample D Male 8.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 15.7
Sample A Male 22.7
Sample B Male 21.7
Sample C Female 21.4
Sample D Female 15.7
Hippocampal formation
nTPM: 23.4
Samples: 4

Max nTPM: 29.9
Min nTPM: 15.0
Sample A Male 23.2
Sample B Male 29.9
Sample C Female 15.0
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
77869820 Antisense, RP_070212_02_D05, Mouse strain C57BL/6J (56 days, male) 7.9
72128753 Antisense, RP_051017_04_C09, Mouse strain C57BL/6J (56 days, male) 7.8
69407385 Antisense, RP_050414_01_E09, Mouse strain C57BL/6J (56 days, male) 6.9

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