We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ENSG00000187186
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ENSG00000187186
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:95.6 nTPM
HPA Brain:35.8 nTPM
GTEx:95.6 nTPM
FANTOM5:22.0 Scaled Tags Per Million
Pig:2.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA069617
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 35.8
2846 Female, age 79, unknown 45.4
2290 Female, age 72, unknown 45.1
1857 Female, age 85, left hemisphere 33.7
1854 Male, age 80, left hemisphere 33.6
2288 Male, age 75, left hemisphere 33.2
2289 Male, age 61, right hemisphere 32.4
2481 Female, age 94, left hemisphere 31.5
1781 Male, age 74, unknown 31.3
Globus pallidus, externus
nTPM: 26.8
2395 Male, age 75, both hemispheres 30.4
1996 Male, age 80, right hemisphere 27.1
2772 Female, age 79, unknown 26.9
2567 Female, age 72, unknown 25.1
2646 Male, age 61, right hemisphere 24.8
Globus pallidus, internus
nTPM: 25.6
2483 Female, age 94, right hemisphere 41.3
2037 Male, age 80, right hemisphere 28.4
2287 Male, age 75, right hemisphere 26.8
2566 Female, age 72, unknown 22.9
2778 Female, age 91, both hemispheres 22.9
1818 Male, age 74, unknown 20.9
2111 Female, age 85, right hemisphere 15.8
Nucleus accumbens
nTPM: 29.2
1856 Female, age 91, right hemisphere 37.1
2286 Male, age 75, left hemisphere 36.3
1783 Male, age 74, unknown 35.1
2824 Male, age 61, right hemisphere 32.0
1806 Female, age 85, left hemisphere 30.3
2698 Female, age 72, unknown 23.7
2391 Female, age 94, left hemisphere 21.6
2732 Male, age 80, right hemisphere 17.3
Nucleus basalis of Meynert
nTPM: 26.2
2393 Male, age 80, right hemisphere 28.1
2484 Female, age 94, left hemisphere 26.2
2821 Male, age 75, both hemispheres 25.7
2569 Male, age 61, both hemispheres 24.9
Nucleus of the diagonal band
nTPM: 24.7
1812 Female, age 91, both hemispheres 30.0
1979 Male, age 74, unknown 27.6
2775 Male, age 80, right hemisphere 27.1
2029 Male, age 61, right hemisphere 21.4
2195 Female, age 85, both hemispheres 17.4
Putamen
nTPM: 35.0
2466 Female, age 79, unknown 48.5
2647 Male, age 75, left hemisphere 36.7
1937 Female, age 91, right hemisphere 35.9
2489 Female, age 72, unknown 34.4
1829 Male, age 74, unknown 30.9
1838 Male, age 80, right hemisphere 29.6
2482 Female, age 94, left hemisphere 29.1
Septal nuclei
nTPM: 25.3
1960 Male, age 74, unknown 35.4
2031 Female, age 72, unknown 30.0
2629 Female, age 94, right hemisphere 25.0
2199 Male, age 80, right hemisphere 23.8
2009 Female, age 91, both hemispheres 23.6
2059 Female, age 85, both hemispheres 21.3
2394 Male, age 61, left hemisphere 18.0
Stria terminalis, bed nucleus
nTPM: 25.8
2486 Female, age 94, both hemispheres 28.6
1974 Female, age 91, both hemispheres 27.5
2201 Male, age 74, unknown 21.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 84.2
Samples: 246

Max nTPM: 229.1
Min nTPM: 23.0
Std nTPM: 35.1
Median nTPM: 78.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 229.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 226.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 211.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 183.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 176.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 166.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 163.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 158.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 151.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 149.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 144.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 142.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 137.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 137.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 137.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 136.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 134.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 133.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 132.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 132.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 132.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 131.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 129.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 127.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 126.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 124.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 124.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 123.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 121.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 120.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 120.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 119.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 118.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 115.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 112.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 112.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 111.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 111.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 110.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 110.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 109.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 108.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 108.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 108.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 108.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 108.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 107.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 106.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 106.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 106.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 105.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 104.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 104.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 103.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 103.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 102.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 102.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 101.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 101.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 101.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 101.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 100.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 100.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 100.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 99.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 98.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 98.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 98.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 97.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 96.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 96.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 96.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 96.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 96.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 95.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 95.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 95.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 94.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 94.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 93.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 93.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 92.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 92.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 92.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 91.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 91.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 90.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 90.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 90.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 90.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 90.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 88.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 88.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 88.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 87.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 86.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 85.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 85.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 85.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 85.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 84.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 84.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 84.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 84.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 84.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 82.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 81.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 81.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 81.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 81.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 80.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 79.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 79.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 79.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 79.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 78.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 78.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 78.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 78.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 77.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 77.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 77.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 77.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 76.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 76.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 76.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 75.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 75.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 75.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 73.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 73.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 72.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 72.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 71.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 71.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 71.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 69.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 69.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 69.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 69.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 69.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 68.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 68.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 67.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 67.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 67.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 67.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 67.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 65.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 65.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 65.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 64.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 64.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 63.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 62.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 60.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 58.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 58.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 57.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 57.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 57.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 56.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 56.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 55.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 55.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 54.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 54.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 52.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 51.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 51.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 51.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 50.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 50.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 50.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 49.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 48.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 48.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 48.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 48.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 48.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 46.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 42.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 42.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 40.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 38.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 37.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 36.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 35.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 35.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 32.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 31.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 29.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 27.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 24.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 24.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 23.0
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 65.1
Samples: 246

Max nTPM: 173.5
Min nTPM: 18.0
Std nTPM: 26.6
Median nTPM: 60.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 173.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 166.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 155.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 147.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 138.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 129.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 127.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 123.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 123.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 116.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 114.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 113.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 111.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 110.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 110.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 108.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 106.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 106.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 105.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 103.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 100.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 100.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 99.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 99.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 98.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 98.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 97.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 97.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 97.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 97.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 97.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 96.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 96.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 95.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 95.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 94.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 92.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 92.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 91.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 90.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 89.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 87.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 87.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 86.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 86.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 86.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 85.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 85.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 85.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 84.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 84.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 84.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 83.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 83.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 83.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 82.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 82.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 82.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 82.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 82.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 81.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 81.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 81.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 80.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 80.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 80.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 79.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 77.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 76.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 76.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 76.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 76.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 76.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 75.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 74.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 74.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 74.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 74.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 74.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 74.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 74.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 71.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 70.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 70.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 70.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 69.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 69.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 69.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 69.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 68.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 68.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 68.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 68.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 67.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 67.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 67.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 67.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 66.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 66.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 66.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 65.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 65.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 65.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 65.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 64.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 64.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 64.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 63.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 63.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 63.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 62.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 62.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 62.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 62.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 61.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 61.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 61.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 61.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 61.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 60.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 60.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 60.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 60.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 59.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 59.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 59.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 58.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 58.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 58.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 58.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 57.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 57.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 57.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 57.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 56.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 56.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 56.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 55.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 55.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 55.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 55.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 55.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 54.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 54.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 53.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 53.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 53.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 52.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 52.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 52.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 51.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 51.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 51.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 51.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 51.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 51.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 51.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 50.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 50.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 50.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 50.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 50.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 50.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 49.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 49.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 48.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 48.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 48.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 48.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 48.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 48.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 48.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 47.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 47.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 46.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 46.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 46.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 46.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 46.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 45.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 45.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 45.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 44.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 43.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 42.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 42.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 41.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 41.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 40.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 40.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 40.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 39.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 39.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 39.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 38.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 38.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 38.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 38.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 38.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 37.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 36.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 36.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 36.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 36.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 36.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 36.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 35.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 35.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 34.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 34.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 33.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 33.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 33.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 33.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 33.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 32.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 32.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 31.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 30.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 27.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 27.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 25.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 25.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 24.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 22.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 20.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 20.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 19.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 18.0
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 95.6
Samples: 205

Max nTPM: 252.0
Min nTPM: 19.8
Std nTPM: 36.0
Median nTPM: 92.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 252.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 210.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 182.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 164.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 164.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 160.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 159.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 157.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 154.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 154.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 153.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 152.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 151.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 150.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 149.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 149.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 144.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 144.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 140.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 138.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 138.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 137.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 137.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 136.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 136.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 136.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 136.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 135.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 135.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 135.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 135.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 134.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 133.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 133.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 132.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 131.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 130.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 128.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 128.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 127.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 127.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 127.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 125.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 125.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 124.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 124.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 123.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 123.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 123.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 122.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 121.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 120.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 120.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 120.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 119.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 117.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 117.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 116.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 114.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 113.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 112.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 111.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 111.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 111.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 111.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 110.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 110.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 110.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 109.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 109.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 109.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 109.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 108.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 108.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 107.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 107.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 107.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 105.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 105.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 104.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 104.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 104.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 103.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 102.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 101.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 100.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 100.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 99.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 99.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 99.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 99.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 98.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 98.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 97.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 96.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 96.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 96.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 94.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 93.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 93.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 93.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 92.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 92.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 92.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 92.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 92.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 92.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 92.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 91.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 91.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 91.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 90.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 90.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 89.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 88.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 87.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 87.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 87.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 86.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 86.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 85.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 84.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 83.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 83.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 82.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 82.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 82.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 81.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 80.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 80.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 79.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 78.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 78.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 78.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 78.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 77.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 77.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 77.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 77.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 76.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 74.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 74.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 73.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 73.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 72.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 72.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 72.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 71.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 70.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 70.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 70.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 69.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 69.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 69.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 68.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 67.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 67.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 67.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 67.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 66.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 66.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 63.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 63.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 63.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 61.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 61.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 59.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 59.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 58.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 58.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 57.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 56.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 56.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 56.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 53.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 53.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 51.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 51.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 50.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 50.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 48.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 48.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 47.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 46.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 41.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 40.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 39.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 38.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 37.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 35.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 34.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 33.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 32.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 30.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 29.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 25.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 19.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

22.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 12.9
FF:10164-103B2 76 years, female 12.9
Nucleus accumbens
Scaled Tags Per Million: 10.0
FF:10037-101F1 23-56 years, mixed 10.0
Putamen
Scaled Tags Per Million: 22.0
FF:10176-103C5 60 years, female 22.0
Globus pallidus
Scaled Tags Per Million: 10.5
FF:10175-103C4 60 years, female 14.1
FF:10161-103A8 76 years, female 6.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.3
Pig sample Sample description nTPM
Caudate
nTPM: 2.2
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.8
Sample A Female 2.0
Sample B Female 1.8
Sample C Male 2.2
Sample D Male 2.8
Putamen
nTPM: 1.8
Samples: 4

Max nTPM: 2.1
Min nTPM: 1.3
Sample A Female 1.8
Sample B Female 1.8
Sample C Male 1.3
Sample D Male 2.1
Septum
nTPM: 2.4
Samples: 4

Max nTPM: 2.9
Min nTPM: 1.7
Sample A Female 1.7
Sample B Female 2.0
Sample C Male 2.8
Sample D Male 2.9
Ventral pallidum
nTPM: 2.1
Samples: 4

Max nTPM: 2.2
Min nTPM: 1.8
Sample A Female 1.8
Sample B Female 2.0
Sample C Male 2.2
Sample D Male 2.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org