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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:67.7 nTPM
HPA Brain:140.5 nTPM
GTEx:67.7 nTPM
FANTOM5:270.0 Scaled Tags Per Million
Pig:207.3 nTPM
Mouse:295.6 nTPM
Allen mouse:20.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044863
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 109.6
1857 Female, age 85, left hemisphere 124.5
1781 Male, age 74, unknown 123.7
2846 Female, age 79, unknown 117.6
2481 Female, age 94, left hemisphere 114.2
2290 Female, age 72, unknown 109.7
1854 Male, age 80, left hemisphere 104.5
2288 Male, age 75, left hemisphere 96.3
2289 Male, age 61, right hemisphere 86.4
Globus pallidus, externus
nTPM: 51.7
2646 Male, age 61, right hemisphere 61.8
2395 Male, age 75, both hemispheres 61.2
2772 Female, age 79, unknown 56.1
1996 Male, age 80, right hemisphere 40.6
2567 Female, age 72, unknown 38.9
Globus pallidus, internus
nTPM: 57.3
2483 Female, age 94, right hemisphere 108.3
2287 Male, age 75, right hemisphere 72.7
1818 Male, age 74, unknown 54.9
2778 Female, age 91, both hemispheres 50.2
2566 Female, age 72, unknown 46.0
2037 Male, age 80, right hemisphere 36.8
2111 Female, age 85, right hemisphere 32.5
Nucleus accumbens
nTPM: 119.0
1856 Female, age 91, right hemisphere 177.1
1783 Male, age 74, unknown 138.8
1806 Female, age 85, left hemisphere 121.8
2698 Female, age 72, unknown 121.1
2391 Female, age 94, left hemisphere 118.9
2824 Male, age 61, right hemisphere 107.2
2286 Male, age 75, left hemisphere 94.4
2732 Male, age 80, right hemisphere 72.4
Nucleus basalis of Meynert
nTPM: 79.5
2484 Female, age 94, left hemisphere 91.7
2393 Male, age 80, right hemisphere 90.1
2821 Male, age 75, both hemispheres 79.1
2569 Male, age 61, both hemispheres 57.0
Nucleus of the diagonal band
nTPM: 140.5
1812 Female, age 91, both hemispheres 177.4
2775 Male, age 80, right hemisphere 163.8
2195 Female, age 85, both hemispheres 146.2
2029 Male, age 61, right hemisphere 108.0
1979 Male, age 74, unknown 106.9
Putamen
nTPM: 101.1
1838 Male, age 80, right hemisphere 132.7
1937 Female, age 91, right hemisphere 129.7
2466 Female, age 79, unknown 110.1
2482 Female, age 94, left hemisphere 104.6
1829 Male, age 74, unknown 100.0
2647 Male, age 75, left hemisphere 68.0
2489 Female, age 72, unknown 62.8
Septal nuclei
nTPM: 119.9
2031 Female, age 72, unknown 161.4
1960 Male, age 74, unknown 156.1
2009 Female, age 91, both hemispheres 145.3
2629 Female, age 94, right hemisphere 130.7
2059 Female, age 85, both hemispheres 94.0
2394 Male, age 61, left hemisphere 79.1
2199 Male, age 80, right hemisphere 72.4
Stria terminalis, bed nucleus
nTPM: 132.4
1974 Female, age 91, both hemispheres 162.6
2201 Male, age 74, unknown 121.1
2486 Female, age 94, both hemispheres 113.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 53.8
Samples: 246

Max nTPM: 121.1
Min nTPM: 14.5
Std nTPM: 21.6
Median nTPM: 51.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 121.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 120.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 120.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 108.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 107.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 106.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 105.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 103.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 100.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 93.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 93.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 92.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 90.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 89.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 88.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 88.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 88.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 87.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 87.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 86.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 86.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 85.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 85.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 84.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 84.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 84.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 84.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 83.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 79.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 79.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 79.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 78.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 78.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 78.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 78.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 77.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 77.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 76.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 75.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 75.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 73.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 72.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 72.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 72.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 71.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 71.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 71.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 71.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 70.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 69.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 69.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 69.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 69.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 68.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 68.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 68.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 66.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 66.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 65.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 65.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 64.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 64.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 64.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 63.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 63.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 63.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 62.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 61.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 61.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 61.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 60.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 60.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 59.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 59.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 58.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 58.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 58.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 58.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 58.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 57.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 57.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 57.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 56.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 56.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 56.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 56.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 56.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 56.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 55.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 55.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 55.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 54.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 54.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 53.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 53.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 53.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 53.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 52.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 52.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 51.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 51.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 51.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 50.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 50.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 49.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 49.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 48.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 48.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 48.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 48.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 48.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 48.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 48.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 47.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 47.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 46.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 46.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 46.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 45.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 44.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 44.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 44.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 44.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 44.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 43.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 43.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 42.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 42.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 41.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 41.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 40.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 39.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 39.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 39.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 39.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 39.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 39.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 38.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 38.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 37.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 36.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 36.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 36.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 36.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 35.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 35.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 34.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 34.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 34.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 34.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 33.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 33.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 33.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 32.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 32.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 32.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 32.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 31.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 31.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 31.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 31.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 29.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 29.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 28.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 28.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 27.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 27.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 27.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 27.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 26.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 26.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 26.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 26.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 25.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 25.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 25.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 24.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 24.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 24.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 23.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 23.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 22.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 22.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 21.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 20.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 19.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 19.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 18.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 14.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 67.7
Samples: 246

Max nTPM: 135.4
Min nTPM: 14.2
Std nTPM: 27.2
Median nTPM: 68.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 135.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 133.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 132.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 125.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 122.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 119.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 118.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 118.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 116.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 116.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 113.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 112.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 111.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 110.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 108.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 108.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 107.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 106.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 106.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 105.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 105.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 104.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 104.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 103.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 103.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 103.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 101.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 101.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 101.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 100.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 100.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 99.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 98.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 98.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 98.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 98.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 97.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 97.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 96.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 94.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 94.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 93.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 93.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 93.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 93.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 92.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 91.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 91.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 91.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 90.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 90.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 90.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 89.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 89.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 89.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 89.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 89.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 88.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 88.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 87.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 87.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 87.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 87.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 86.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 86.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 86.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 86.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 85.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 85.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 85.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 85.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 84.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 84.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 84.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 84.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 83.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 83.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 82.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 81.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 81.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 81.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 81.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 81.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 80.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 79.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 79.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 79.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 78.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 78.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 77.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 77.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 77.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 77.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 77.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 76.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 76.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 75.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 74.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 74.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 74.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 73.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 73.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 73.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 72.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 72.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 72.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 71.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 71.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 71.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 71.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 71.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 70.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 70.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 70.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 69.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 69.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 69.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 68.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 68.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 67.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 67.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 67.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 67.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 67.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 67.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 67.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 66.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 66.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 66.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 66.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 65.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 65.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 65.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 65.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 65.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 65.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 65.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 64.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 63.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 63.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 62.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 61.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 60.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 59.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 59.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 58.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 58.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 57.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 56.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 56.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 55.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 55.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 55.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 54.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 53.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 53.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 53.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 51.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 51.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 51.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 50.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 49.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 49.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 48.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 48.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 48.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 47.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 47.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 47.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 47.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 46.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 46.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 45.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 44.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 44.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 43.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 43.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 43.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 42.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 42.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 42.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 41.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 41.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 41.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 41.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 40.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 39.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 38.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 37.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 37.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 37.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 37.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 37.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 36.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 35.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 35.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 35.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 34.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 33.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 33.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 32.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 32.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 32.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 32.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 32.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 31.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 31.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 29.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 29.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 29.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 28.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 28.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 27.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 27.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 27.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 27.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 27.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 26.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 25.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 25.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 24.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 23.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 23.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 22.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 22.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 20.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 19.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 18.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 17.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 14.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 14.2
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Brain - Putamen (basal ganglia)
Average nTPM: 48.4
Samples: 205

Max nTPM: 100.7
Min nTPM: 12.5
Std nTPM: 20.2
Median nTPM: 46.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 100.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 99.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 94.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 90.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 88.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 88.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 88.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 86.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 84.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 83.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 83.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 82.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 81.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 81.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 81.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 81.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 80.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 80.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 80.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 79.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 77.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 76.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 75.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 75.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 75.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 75.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 74.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 74.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 74.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 73.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 73.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 72.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 72.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 72.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 72.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 72.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 71.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 71.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 70.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 70.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 69.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 68.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 68.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 68.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 68.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 68.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 67.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 65.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 63.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 63.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 61.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 60.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 59.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 59.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 58.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 58.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 58.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 58.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 58.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 57.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 57.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 57.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 57.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 57.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 56.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 56.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 55.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 55.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 54.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 53.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 53.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 53.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 51.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 51.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 51.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 51.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 51.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 51.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 49.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 49.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 49.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 49.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 48.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 48.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 47.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 47.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 47.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 47.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 46.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 46.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 46.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 46.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 46.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 46.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 46.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 46.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 46.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 45.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 44.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 44.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 43.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 43.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 43.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 42.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 42.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 41.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 41.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 41.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 40.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 40.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 39.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 39.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 39.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 39.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 39.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 38.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 37.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 37.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 37.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 37.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 37.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 37.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 36.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 35.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 34.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 34.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 34.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 34.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 34.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 33.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 33.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 33.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 33.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 33.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 33.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 32.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 32.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 31.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 31.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 31.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 31.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 31.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 31.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 31.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 31.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 31.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 30.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 30.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 29.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 29.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 29.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 29.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 28.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 27.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 27.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 27.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 27.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 27.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 26.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 25.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 25.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 25.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 23.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 23.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 23.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 22.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 22.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 22.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 21.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 21.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 20.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 19.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 19.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 19.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 18.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 18.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 18.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 17.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 17.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 16.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 16.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 12.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

270.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 194.3
FF:10164-103B2 76 years, female 194.3
Nucleus accumbens
Scaled Tags Per Million: 216.3
FF:10037-101F1 23-56 years, mixed 216.3
Putamen
Scaled Tags Per Million: 270.0
FF:10176-103C5 60 years, female 270.0
Globus pallidus
Scaled Tags Per Million: 78.3
FF:10175-103C4 60 years, female 83.9
FF:10161-103A8 76 years, female 72.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

207.3
Pig sample Sample description nTPM
Caudate
nTPM: 194.7
Samples: 4

Max nTPM: 232.7
Min nTPM: 165.6
Sample A Female 165.6
Sample B Female 181.4
Sample C Male 232.7
Sample D Male 199.0
Putamen
nTPM: 207.3
Samples: 4

Max nTPM: 323.8
Min nTPM: 115.6
Sample A Female 115.6
Sample B Female 178.8
Sample C Male 323.8
Sample D Male 211.0
Septum
nTPM: 156.1
Samples: 4

Max nTPM: 174.9
Min nTPM: 122.9
Sample A Female 174.3
Sample B Female 152.1
Sample C Male 174.9
Sample D Male 122.9
Ventral pallidum
nTPM: 168.8
Samples: 4

Max nTPM: 184.4
Min nTPM: 146.2
Sample A Female 180.4
Sample B Female 164.3
Sample C Male 184.4
Sample D Male 146.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

295.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 219.7
Samples: 4

Max nTPM: 226.4
Min nTPM: 215.0
Sample A Male 220.8
Sample B Male 215.0
Sample C Female 226.4
Sample D Female 216.5
Septum
nTPM: 295.6
Samples: 4

Max nTPM: 318.9
Min nTPM: 282.7
Sample A Male 318.9
Sample B Male 282.7
Sample C Female 283.6
Sample D Female 297.2
Ventral forebrain
nTPM: 258.1
Samples: 4

Max nTPM: 290.4
Min nTPM: 235.1
Sample A Male 244.4
Sample B Male 290.4
Sample C Female 235.1
Sample D Female 262.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

20.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.9
67936212 Antisense, RP_040407_01_E10, Mouse strain C57BL/6J (56 days, male) 18.6
71665000 Antisense, RP_050927_04_G11, Mouse strain C57BL/6J (56 days, male) 15.3
Pallidum
Expression energy: 20.7
67936212 Antisense, RP_040407_01_E10, Mouse strain C57BL/6J (56 days, male) 22.3
71665000 Antisense, RP_050927_04_G11, Mouse strain C57BL/6J (56 days, male) 19.1

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