We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
COL4A1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • COL4A1
TISSUE PRIMARY DATA BREAST Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Breast
Tissue proteome
Breast
BREAST - Expression summary
Protein expression
Breasti

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Adipocytes: Low
Glandular cells: Not detected
Myoepithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:126.2 nTPM
HPA:17.9 nTPM
GTEx:126.2 nTPM
FANTOM5:540.5 Scaled Tags Per Million

BREAST - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB001695
Adipocytes Low
Glandular cells Not detected
Myoepithelial cells Not detected



BREAST - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.9
overview
Female, age 52
Breast sample 373
nTPM: 19.4
Cell types%
Glandular cells:
15

Adipocytes:
5

Other cell types:
80

overview
Female, age 80
Breast sample 390
nTPM: 30.3
Cell types%
Glandular cells:
5

Adipocytes:
15

Other cell types:
80

overview
Female, age 47
Breast sample 405
nTPM: 4.4
Cell types%
Glandular cells:
5

Adipocytes:
5

Other cell types:
90

overview
Female, age 38
Breast sample 410
nTPM: 17.6
Cell types%
Glandular cells:
40

Adipocytes:
5

Other cell types:
55


BREAST - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.2
GTEx sample id Sample description nTPM
Breast - Mammary Tissue
Average nTPM: 126.2
Samples: 459

Max nTPM: 857.4
Min nTPM: 6.8
Std nTPM: 109.1
Median nTPM: 92.6
GTEX-REY6-2426-SM-48FF5 60-69 years, male 857.4
GTEX-1HSMO-0826-SM-ADEIV 60-69 years, male 513.1
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 475.2
GTEX-183FY-1126-SM-7DHLJ 20-29 years, male 473.1
GTEX-1F5PK-2126-SM-7PC28 50-59 years, male 467.9
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 444.4
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 440.5
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 435.4
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 423.4
GTEX-1HR9M-2426-SM-ACKXI 60-69 years, male 416.1
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 373.4
GTEX-1QP9N-1826-SM-E8VMP 30-39 years, male 354.3
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 345.8
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 340.4
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 340.2
GTEX-144GM-0926-SM-5O994 20-29 years, male 337.3
GTEX-117YX-1426-SM-5H12H 50-59 years, male 334.2
GTEX-1I1GU-1026-SM-ADEHJ 40-49 years, male 333.7
GTEX-1C6VQ-0426-SM-79OOX 50-59 years, male 332.4
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 331.7
GTEX-1L5NE-2126-SM-CY8IH 50-59 years, male 331.3
GTEX-11P82-1326-SM-5HL62 20-29 years, male 330.9
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 330.3
GTEX-1PPH7-0826-SM-E8VNX 40-49 years, male 329.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 329.0
GTEX-1JKYN-0726-SM-ARZMY 30-39 years, male 326.0
GTEX-17GQL-0326-SM-7LG5U 60-69 years, male 324.5
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 323.8
GTEX-14B4R-1226-SM-5TDDT 30-39 years, male 322.7
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 322.4
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 322.4
GTEX-1R7EV-1526-SM-E8VOD 40-49 years, male 313.2
GTEX-WFON-1826-SM-3GILG 40-49 years, male 310.4
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 305.0
GTEX-18D9A-1526-SM-7LG4J 30-39 years, female 301.4
GTEX-17MF6-0326-SM-7EPH5 40-49 years, male 297.4
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 295.9
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 295.4
GTEX-1HCU8-0126-SM-ADEHH 60-69 years, female 294.8
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 292.3
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 290.7
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 289.8
GTEX-18A7B-2626-SM-7LG55 70-79 years, male 289.0
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 288.6
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 287.5
GTEX-1MJK3-1126-SM-E9J3F 20-29 years, male 287.3
GTEX-V955-2026-SM-3GAFA 60-69 years, male 284.0
GTEX-1JN1M-3026-SM-CMKGK 60-69 years, female 283.5
GTEX-14PJ4-2126-SM-6ETZJ 60-69 years, male 282.6
GTEX-1GPI7-0926-SM-7PC3J 20-29 years, male 282.1
GTEX-ZLWG-1926-SM-DO92J 50-59 years, female 277.9
GTEX-1HCU7-1026-SM-ADEIP 50-59 years, male 277.4
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 276.7
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 276.5
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 275.9
GTEX-1CAMR-1426-SM-793BO 20-29 years, male 273.0
GTEX-R55D-0826-SM-48FEA 50-59 years, male 272.5
GTEX-ZLFU-2126-SM-DO931 40-49 years, male 271.5
GTEX-1NHNU-0926-SM-E9J2T 50-59 years, male 270.6
GTEX-1S82Z-0726-SM-E6CHX 30-39 years, female 268.7
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 268.3
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 264.5
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 259.1
GTEX-1OKEX-0826-SM-E9J2B 60-69 years, male 257.8
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 251.8
GTEX-Z9EW-1526-SM-EZ6LU 40-49 years, male 251.7
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 249.1
GTEX-1RLM8-2226-SM-EVYD1 50-59 years, male 247.3
GTEX-1I1GP-0426-SM-COH3N 50-59 years, male 245.5
GTEX-1LC47-1226-SM-D4P44 60-69 years, male 242.0
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 241.5
GTEX-14DAR-1326-SM-7DUEG 50-59 years, male 240.2
GTEX-1C475-1226-SM-7SB72 40-49 years, female 238.4
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 237.4
GTEX-WHSB-1926-SM-EXOHH 50-59 years, male 236.3
GTEX-1KANC-1426-SM-CYPT9 50-59 years, female 236.0
GTEX-X62O-0526-SM-EWRMA 50-59 years, male 233.4
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 232.9
GTEX-15EOM-5019-SM-793DK 20-29 years, female 231.5
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 229.9
GTEX-1H23P-0726-SM-9WG7K 60-69 years, male 226.7
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 226.2
GTEX-1J8Q3-1326-SM-CMKI1 60-69 years, male 225.2
GTEX-1HFI7-0126-SM-CGQFQ 50-59 years, female 224.8
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 222.7
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 221.9
GTEX-16YQH-2826-SM-6PAMY 30-39 years, male 221.5
GTEX-ZDTT-2126-SM-DKPOM 60-69 years, male 221.3
GTEX-1QP28-1226-SM-E9J2M 50-59 years, female 219.6
GTEX-1HSEH-2026-SM-ADEHN 60-69 years, male 219.2
GTEX-1AMEY-1026-SM-718AA 30-39 years, female 217.7
GTEX-14E6C-1326-SM-62LEQ 40-49 years, male 214.1
GTEX-1ICLY-1726-SM-B2LVT 50-59 years, male 213.0
GTEX-1IDFM-0426-SM-B2LVV 60-69 years, male 211.4
GTEX-X261-0626-SM-3NMD9 50-59 years, male 207.9
GTEX-17HGU-1326-SM-79OKB 50-59 years, male 207.5
GTEX-15UF7-0726-SM-6M46D 40-49 years, male 206.2
GTEX-1IDJF-2326-SM-ARL86 20-29 years, male 205.0
GTEX-1AX9J-1126-SM-731B7 60-69 years, male 201.8
GTEX-13113-5013-SM-7SB7G 60-69 years, female 201.1
GTEX-1PDJ9-1126-SM-EXUSW 20-29 years, male 200.5
GTEX-1QCLZ-2326-SM-DTXDO 60-69 years, female 200.4
GTEX-1N2EF-2226-SM-E9J33 60-69 years, male 199.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 196.3
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 195.5
GTEX-QMRM-1626-SM-D4P1U 50-59 years, male 194.1
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 193.5
GTEX-1ICG6-1326-SM-ACKWR 70-79 years, female 192.5
GTEX-1JKYR-0926-SM-CMKGJ 20-29 years, male 191.8
GTEX-1QW4Y-1026-SM-DTXE2 30-39 years, male 191.8
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 189.7
GTEX-18465-2026-SM-718AP 50-59 years, male 186.7
GTEX-1IDJU-1826-SM-CMKHV 60-69 years, female 185.4
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 184.5
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 184.1
GTEX-1A3MX-2726-SM-718B6 60-69 years, male 183.4
GTEX-1LG7Z-0726-SM-CXKYD 30-39 years, male 183.4
GTEX-1H11D-1526-SM-9MQJY 40-49 years, male 183.0
GTEX-1GF9V-2526-SM-7SB8K 60-69 years, male 182.3
GTEX-1IGQW-0926-SM-ADEH6 60-69 years, male 182.2
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 181.6
GTEX-1JMOU-2026-SM-CMKGU 60-69 years, female 180.7
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 179.0
GTEX-18A66-1726-SM-7LG5N 60-69 years, male 178.6
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 177.3
GTEX-1LSVX-2426-SM-E6CJX 60-69 years, male 176.6
GTEX-1GF9U-1726-SM-7MGY5 40-49 years, female 176.0
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 175.5
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 175.1
GTEX-YECK-0726-SM-EZ6LV 60-69 years, male 175.1
GTEX-14753-2426-SM-5LU8U 60-69 years, male 173.2
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 171.6
GTEX-1KD5A-1926-SM-DKPQA 50-59 years, male 171.2
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 169.6
GTEX-1I1GV-2426-SM-CGQFM 60-69 years, male 169.2
GTEX-15RJE-2626-SM-7KFT1 40-49 years, male 167.3
GTEX-1HBPM-0126-SM-ARL9E 60-69 years, female 166.7
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 165.1
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 163.7
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 163.6
GTEX-1A3MV-1626-SM-731C1 30-39 years, male 162.2
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 161.4
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 160.9
GTEX-17F9E-2526-SM-7MGW2 50-59 years, male 160.3
GTEX-1S82U-1126-SM-E9U6I 30-39 years, female 160.2
GTEX-1QPFJ-2026-SM-EVYBE 30-39 years, female 159.7
GTEX-1GZ2Q-2626-SM-7MXV9 40-49 years, male 158.1
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 155.9
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 155.7
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 155.6
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 155.4
GTEX-17F98-0526-SM-79OK5 40-49 years, female 153.8
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 153.7
GTEX-17MFQ-0926-SM-7LG4S 20-29 years, male 153.3
GTEX-1E2YA-2726-SM-7IGPW 50-59 years, male 152.3
GTEX-R53T-1526-SM-48FEK 50-59 years, female 151.9
GTEX-1HCU9-0326-SM-9WYSC 20-29 years, male 150.0
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 146.9
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 146.0
GTEX-1M4P7-2626-SM-E9U5F 60-69 years, male 144.7
GTEX-13VXU-2826-SM-664MA 50-59 years, male 144.4
GTEX-1C6WA-2426-SM-7SB86 60-69 years, male 143.1
GTEX-17F97-2526-SM-7EWDV 50-59 years, male 142.9
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 142.1
GTEX-1PPGY-1526-SM-EVYBK 60-69 years, male 139.0
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 138.9
GTEX-17EVQ-0426-SM-7LG57 70-79 years, male 138.6
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 138.5
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 138.3
GTEX-17F96-2426-SM-7IGLN 70-79 years, male 138.1
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 135.6
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 135.0
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 135.0
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 131.8
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 131.2
GTEX-1F75B-0626-SM-7SB8A 50-59 years, male 131.2
GTEX-1ICLZ-0426-SM-B2LW2 60-69 years, male 128.5
GTEX-1AX9I-0726-SM-73KWV 60-69 years, male 126.6
GTEX-1IOXB-1926-SM-ARL8E 50-59 years, male 125.7
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 125.2
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 124.4
GTEX-1LSNL-2826-SM-E9U5L 50-59 years, male 122.9
GTEX-1GMR2-1926-SM-9MQLZ 50-59 years, male 122.3
GTEX-1JMLX-2026-SM-CMKGN 50-59 years, male 122.0
GTEX-16BQI-1026-SM-7KUEA 30-39 years, female 120.8
GTEX-1R46S-2526-SM-E8VN2 60-69 years, female 120.2
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 119.6
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 118.9
GTEX-1KXAM-1026-SM-CY8IA 60-69 years, male 118.7
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 118.5
GTEX-1R9PM-1826-SM-EVYBH 20-29 years, male 115.0
GTEX-1LBAC-0926-SM-CXKY9 20-29 years, male 114.7
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 114.0
GTEX-1MA7X-1626-SM-E9U5B 60-69 years, male 113.5
GTEX-14PKU-0426-SM-6EU1P 40-49 years, female 112.2
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 111.5
GTEX-18A6Q-0926-SM-7LG4N 60-69 years, male 111.4
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 111.1
GTEX-1H3VY-0926-SM-ACKXE 50-59 years, male 110.8
GTEX-13QJ3-0826-SM-7DHKK 50-59 years, male 110.5
GTEX-1I6K6-0826-SM-ARL7Z 30-39 years, male 110.0
GTEX-1NV8Z-2826-SM-E8VME 60-69 years, male 110.0
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 109.7
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 107.9
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 107.7
GTEX-169BO-1126-SM-7MGWN 50-59 years, male 107.4
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 106.7
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 106.4
GTEX-183WM-0726-SM-7LTAA 70-79 years, female 105.8
GTEX-1H4P4-2226-SM-9MQKQ 50-59 years, male 105.4
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 104.6
GTEX-14PJO-0726-SM-69LO8 60-69 years, male 104.6
GTEX-1H1ZS-0126-SM-9YFKQ 70-79 years, male 103.8
GTEX-1LGRB-1826-SM-CNPQL 50-59 years, female 103.6
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 103.3
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 101.8
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 101.5
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 100.8
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 99.6
GTEX-11P81-1926-SM-5BC53 30-39 years, female 98.5
GTEX-14E7W-0826-SM-62LEJ 70-79 years, male 97.7
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 97.7
GTEX-QVJO-1826-SM-447C9 60-69 years, female 97.0
GTEX-11OF3-1926-SM-59889 60-69 years, male 96.2
GTEX-1B8KE-1226-SM-73KWK 50-59 years, male 94.1
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 94.0
GTEX-1I4MK-1626-SM-CM2TJ 50-59 years, female 93.6
GTEX-ZLV1-1426-SM-DO92Z 60-69 years, female 93.1
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 92.6
GTEX-1EWIQ-1726-SM-7SB7T 70-79 years, female 92.6
GTEX-1JN6P-2426-SM-ARL99 60-69 years, male 91.5
GTEX-1QMI2-0726-SM-E9J4F 60-69 years, male 90.2
GTEX-14ICK-2426-SM-6EU27 40-49 years, male 89.9
GTEX-1C6VS-0726-SM-7EPHF 60-69 years, male 89.7
GTEX-1IKOE-1326-SM-CE6T6 30-39 years, female 89.6
GTEX-1HC8U-0826-SM-ADEIL 40-49 years, female 89.4
GTEX-1EKGG-2626-SM-7IGPY 60-69 years, male 88.3
GTEX-1QEPI-0926-SM-DTXF3 60-69 years, female 88.3
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 88.2
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 86.0
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 85.7
GTEX-1H1DG-0526-SM-9YFLN 70-79 years, male 85.6
GTEX-14BMV-0626-SM-793AU 50-59 years, male 85.4
GTEX-1R9JW-0326-SM-EAZ45 30-39 years, female 82.6
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 82.4
GTEX-14BMU-1626-SM-5TDE7 20-29 years, female 82.2
GTEX-15SHW-1326-SM-6PAL8 60-69 years, male 82.1
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 81.4
GTEX-1IDJH-2226-SM-E6CJV 70-79 years, male 81.3
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 81.0
GTEX-17JCI-0726-SM-7EPH1 60-69 years, female 80.3
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 80.2
GTEX-13PVR-2226-SM-7DHKP 60-69 years, female 79.8
GTEX-1J8Q2-2726-SM-A9G2X 60-69 years, male 78.9
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 78.3
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 76.3
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 76.0
GTEX-1LSNM-1326-SM-E9TJ1 50-59 years, male 75.9
GTEX-1B8L1-2426-SM-9WYTE 60-69 years, male 75.5
GTEX-1AX8Z-0926-SM-731AW 60-69 years, male 75.1
GTEX-TML8-1226-SM-32QON 40-49 years, female 73.5
GTEX-117XS-1926-SM-5GICO 60-69 years, male 73.2
GTEX-1F5PL-1026-SM-7RHI1 40-49 years, female 73.2
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 72.1
GTEX-1192X-2326-SM-5987X 50-59 years, male 71.8
GTEX-1HR98-0426-SM-COH36 60-69 years, male 70.4
GTEX-1HT8W-2226-SM-CGQEC 30-39 years, male 70.3
GTEX-1I19N-2826-SM-CL55D 70-79 years, male 70.2
GTEX-1K9T9-1426-SM-DIPFQ 50-59 years, female 68.9
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 68.7
GTEX-1GZHY-0726-SM-9WG6B 50-59 years, female 67.6
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 67.4
GTEX-1B97J-0426-SM-79OLQ 50-59 years, female 67.4
GTEX-1B933-2526-SM-7IGO5 50-59 years, female 67.2
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 66.8
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 66.1
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 66.1
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 65.6
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 65.3
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 65.0
GTEX-QEG5-0726-SM-D4P1T 20-29 years, male 64.7
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 64.6
GTEX-WFG8-2026-SM-EXOHO 20-29 years, male 64.6
GTEX-1J8EW-2626-SM-CL53E 60-69 years, female 64.4
GTEX-1R9PN-0326-SM-DTX85 40-49 years, female 64.2
GTEX-17EVP-0226-SM-79OND 40-49 years, male 63.8
GTEX-1GZ4I-2826-SM-9MQK5 50-59 years, male 63.0
GTEX-1KD4Q-2326-SM-D4P3M 40-49 years, male 62.8
GTEX-1F75A-1826-SM-7SB8G 50-59 years, male 62.6
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 62.5
GTEX-145MF-2226-SM-7EPIR 50-59 years, male 62.1
GTEX-1M5QR-2526-SM-E9U5P 40-49 years, male 62.1
GTEX-111YS-1926-SM-5GICC 60-69 years, male 61.4
GTEX-1122O-1226-SM-5H113 60-69 years, female 61.3
GTEX-11GSP-0926-SM-9WYSG 60-69 years, female 61.3
GTEX-1NUQO-2226-SM-E9U68 20-29 years, female 60.5
GTEX-14A5I-0726-SM-5TDEB 50-59 years, female 60.4
GTEX-18QFQ-0826-SM-718AX 30-39 years, male 60.3
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 60.3
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 60.1
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 59.1
GTEX-1EU9M-2826-SM-7EWFH 60-69 years, male 58.6
GTEX-ZF3C-2326-SM-5S2NC 50-59 years, female 56.3
GTEX-15G19-2126-SM-6M48J 60-69 years, male 56.2
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 55.9
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 54.2
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 53.9
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 53.2
GTEX-1JJE9-2326-SM-ARL8Q 70-79 years, male 51.8
GTEX-1C64O-0726-SM-7DUFU 60-69 years, male 51.6
GTEX-RU1J-0626-SM-4WAWY 20-29 years, female 51.5
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 51.4
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 51.1
GTEX-1J8QM-2026-SM-ARZMW 60-69 years, female 50.9
GTEX-1LNCM-0226-SM-DIPF4 50-59 years, female 50.2
GTEX-1I6K7-1026-SM-A9SLK 40-49 years, male 49.5
GTEX-ZTPG-2826-SM-57WGA 20-29 years, female 48.8
GTEX-15ETS-0626-SM-7KUMX 40-49 years, female 48.3
GTEX-QEL4-2126-SM-447AE 50-59 years, male 46.6
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 46.2
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 46.1
GTEX-1GZ4H-0326-SM-7P8QX 50-59 years, female 46.1
GTEX-1EN7A-1426-SM-7PBY4 40-49 years, male 46.0
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 45.9
GTEX-17EUY-1926-SM-7DUF6 20-29 years, male 45.7
GTEX-17HG3-0126-SM-7IGNH 30-39 years, female 45.5
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 45.0
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 44.7
GTEX-14PN4-0626-SM-62LFP 50-59 years, male 44.4
GTEX-17KNJ-2026-SM-7LG53 50-59 years, male 43.8
GTEX-17HHY-0926-SM-793C1 50-59 years, male 43.7
GTEX-1MA7W-1026-SM-DKPQK 20-29 years, female 43.7
GTEX-1KANA-2026-SM-DIPFB 20-29 years, male 42.8
GTEX-11EI6-0626-SM-5985T 60-69 years, male 42.5
GTEX-XBED-1626-SM-47JYN 60-69 years, male 41.4
GTEX-1A8G7-2426-SM-731AK 60-69 years, male 41.3
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 40.8
GTEX-1KAFJ-0226-SM-DIPEL 50-59 years, male 40.5
GTEX-1I1GT-1126-SM-ARL7J 60-69 years, female 40.3
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 39.9
GTEX-1B97I-0426-SM-79OL7 40-49 years, male 39.1
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 38.9
GTEX-1HCVE-2626-SM-ADEJ8 50-59 years, male 38.5
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 38.1
GTEX-1JK1U-1826-SM-ARL8W 60-69 years, male 37.4
GTEX-1LVAM-0926-SM-E9TJ2 50-59 years, female 37.2
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 36.9
GTEX-1GMRU-0826-SM-9WYT7 50-59 years, male 36.8
GTEX-1MCC2-2126-SM-EWRON 30-39 years, female 36.7
GTEX-16NGA-0826-SM-718AF 40-49 years, female 36.6
GTEX-17HHE-1426-SM-7EPH4 50-59 years, male 36.6
GTEX-RU72-0626-SM-46MUI 50-59 years, female 36.6
GTEX-15UF6-0126-SM-6PAMB 70-79 years, female 36.3
GTEX-1GF9X-1026-SM-ACKX2 40-49 years, female 36.0
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 35.7
GTEX-1JMPY-0526-SM-CL54O 30-39 years, male 35.6
GTEX-1H1CY-2226-SM-9WG7E 60-69 years, female 35.2
GTEX-18A7A-0726-SM-7LTAI 50-59 years, female 34.1
GTEX-1B8KZ-1526-SM-7DUG7 50-59 years, male 34.1
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 34.0
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 33.7
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 32.3
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 31.9
GTEX-1GMR3-2626-SM-7RHHG 40-49 years, male 31.4
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 31.3
GTEX-1HCUA-0726-SM-ACKVU 50-59 years, female 31.3
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 30.9
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 30.8
GTEX-1K2DA-1726-SM-CGQGS 50-59 years, male 30.8
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 30.6
GTEX-14H4A-2526-SM-5YYAY 40-49 years, female 30.5
GTEX-1GMR8-0726-SM-9KNVI 50-59 years, female 30.1
GTEX-1R7EU-1226-SM-E8VMR 60-69 years, male 29.7
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 29.5
GTEX-15ER7-1626-SM-6PAMZ 20-29 years, female 29.5
GTEX-1GN1W-1926-SM-7P8TH 50-59 years, female 29.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 29.3
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 29.0
GTEX-1MCYP-0126-SM-E6CIS 20-29 years, female 29.0
GTEX-1P4AB-1826-SM-E76PU 50-59 years, male 28.9
GTEX-1JMQK-2626-SM-COH2W 60-69 years, male 28.7
GTEX-1IKOH-2326-SM-CM2TW 60-69 years, female 28.5
GTEX-1HKZK-1826-SM-ADEJ2 40-49 years, male 28.4
GTEX-1F6I4-2526-SM-7SB8F 60-69 years, male 28.3
GTEX-1QP29-1726-SM-E8VMQ 50-59 years, male 28.3
GTEX-1IKJJ-2326-SM-COH3U 60-69 years, male 28.2
GTEX-ZGAY-1726-SM-DO91P 40-49 years, female 28.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 27.4
GTEX-1HBPN-2326-SM-9WPPU 50-59 years, male 27.3
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 27.0
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 26.6
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 26.6
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 26.4
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 26.3
GTEX-1H1E6-0926-SM-9YFLT 30-39 years, male 26.0
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 25.8
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 25.5
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 25.5
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 25.4
GTEX-1IE54-0626-SM-ARL8D 40-49 years, female 25.4
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 25.0
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 24.3
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 23.8
GTEX-1POEN-0926-SM-DTX88 30-39 years, female 23.4
GTEX-ZAK1-1326-SM-EVYAS 50-59 years, female 23.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 22.9
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 22.9
GTEX-1RAZQ-1226-SM-EWRNL 30-39 years, male 22.9
GTEX-14LLW-0626-SM-62LFC 70-79 years, female 22.8
GTEX-1CB4J-1826-SM-7EWF9 60-69 years, male 22.0
GTEX-1MJK2-2226-SM-EVYCR 50-59 years, male 21.9
GTEX-1QCLY-1626-SM-DTXDW 30-39 years, male 21.9
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 21.7
GTEX-1I1HK-2426-SM-ADEHX 60-69 years, male 21.6
GTEX-15FZZ-0726-SM-7KUFZ 30-39 years, female 21.5
GTEX-S341-1526-SM-4AD6K 40-49 years, female 21.5
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 21.2
GTEX-1RAZS-1226-SM-E8VMT 50-59 years, male 20.9
GTEX-1CB4E-0226-SM-79OLW 60-69 years, male 20.8
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 20.6
GTEX-1HUB1-1626-SM-CM2SL 60-69 years, male 20.5
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 20.0
GTEX-1B932-0826-SM-73KXG 40-49 years, female 19.8
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 19.7
GTEX-1JMPZ-1626-SM-COH31 30-39 years, male 19.7
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 19.5
GTEX-13SLX-2326-SM-5ZZWE 50-59 years, female 19.1
GTEX-1N2EE-2126-SM-E8VNN 60-69 years, male 19.1
GTEX-14PHY-1926-SM-5YY95 60-69 years, female 19.0
GTEX-1CB4G-2326-SM-79OOI 60-69 years, male 18.9
GTEX-1GN1U-0526-SM-9KNTT 50-59 years, female 18.9
GTEX-1IDJE-0826-SM-CKZNZ 50-59 years, female 18.9
GTEX-1HSKV-2026-SM-CMKGX 60-69 years, male 18.4
GTEX-1BAJH-0826-SM-7EWEF 70-79 years, male 18.3
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 18.3
GTEX-1HSGN-1526-SM-A9SMO 40-49 years, female 18.2
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 18.1
GTEX-1CAMS-1426-SM-7IGPM 40-49 years, female 17.5
GTEX-1IY9M-2726-SM-CMKG5 60-69 years, male 17.1
GTEX-13SLW-2526-SM-62LDQ 70-79 years, male 17.0
GTEX-1GN2E-2226-SM-9WG6J 60-69 years, male 16.9
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 16.7
GTEX-T6MN-0726-SM-32PML 50-59 years, male 16.7
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 16.3
GTEX-1LVAN-1326-SM-CNPQE 50-59 years, female 15.9
GTEX-1N5O9-1126-SM-DTXEQ 60-69 years, male 15.3
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 15.0
GTEX-1B8SG-1226-SM-7IGPF 50-59 years, male 14.5
GTEX-1GPI6-0626-SM-7RHHJ 60-69 years, male 14.5
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 13.2
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 13.1
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 12.9
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 12.7
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 11.7
GTEX-1F75I-2026-SM-7SB7N 40-49 years, male 11.6
GTEX-1RQEC-2026-SM-DTXDM 60-69 years, male 9.5
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 9.4
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 8.0
GTEX-1JJEA-2726-SM-ARL8V 60-69 years, male 6.8
Show allShow less

BREAST - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

540.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Breast
Scaled Tags Per Million: 540.5
FF:10080-102A8 77 years, female 540.5

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org