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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
135.9
nTPM
FANTOM5:
147.5
Scaled Tags Per Million
Allen mouse:
0.6
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
135.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 113.4
1984
Male, age 76, both hemispheres
151.5
2090
Male, age 80, both hemispheres
110.5
2188
Female, age 91, both hemispheres
100.0
2301
Female, age 85, both hemispheres
91.5
Dorsal cochlear nucleus nTPM: 108.5
2802
Male, age 74, right hemisphere
126.3
2058
Male, age 76, both hemispheres
122.7
2187
Female, age 91, both hemispheres
113.7
2378
Male, age 80, both hemispheres
90.0
2370
Male, age 61, both hemispheres
89.9
Dorsal tegmental nucleus nTPM: 116.7
2083
Male, age 80, both hemispheres
126.3
2358
Male, age 61, both hemispheres
115.2
2326
Male, age 74, both hemispheres
113.7
1936
Male, age 76, left hemisphere
111.4
Dorsolateral tegmental area nTPM: 117.3
2337
Male, age 61, both hemispheres
134.4
2360
Male, age 74, both hemispheres
124.0
2141
Male, age 76, both hemispheres
121.5
2654
Male, age 80, both hemispheres
111.3
2751
Female, age 85, both hemispheres
95.4
Kolliker-Fuse nucleus nTPM: 108.2
2315
Male, age 76, right hemisphere
127.1
2163
Male, age 80, both hemispheres
104.1
2793
Female, age 91, left hemisphere
93.4
Lateral lemniscal nuclei nTPM: 83.7
2746
Female, age 85, left hemisphere
95.3
2169
Male, age 76, both hemispheres
90.0
2453
Male, age 74, right hemisphere
88.7
2320
Female, age 91, left hemisphere
82.9
2036
Male, age 80, both hemispheres
61.5
Lateral parabrachial nucleus nTPM: 120.1
2792
Male, age 76, both hemispheres
135.9
2139
Female, age 85, right hemisphere
127.7
2013
Male, age 80, both hemispheres
109.7
2790
Male, age 61, both hemispheres
107.0
Lateral vestibular nucleus nTPM: 105.4
2311
Male, age 80, both hemispheres
115.7
2184
Male, age 76, both hemispheres
95.0
Locus coeruleus nTPM: 104.5
2123
Female, age 91, both hemispheres
116.9
2162
Male, age 80, both hemispheres
116.3
2317
Female, age 72, unknown
103.2
2720
Male, age 74, both hemispheres
103.2
2788
Male, age 74, unknown
100.6
2014
Male, age 55, unknown
97.1
1980
Male, age 76, both hemispheres
93.9
Medial parabrachial nucleus nTPM: 111.0
2463
Female, age 85, right hemisphere
141.8
2156
Male, age 61, both hemispheres
109.8
2786
Male, age 76, both hemispheres
106.7
2854
Male, age 80, both hemispheres
102.6
2170
Female, age 91, both hemispheres
94.2
Medial periolivary nuclei nTPM: 94.9
2063
Male, age 76, both hemispheres
108.6
2791
Male, age 74, right hemisphere
96.4
2171
Female, age 85, both hemispheres
95.6
2081
Male, age 80, both hemispheres
87.8
2458
Female, age 91, both hemispheres
86.4
Motor facial nucleus nTPM: 99.8
2795
Female, age 91, both hemispheres
112.8
2062
Male, age 76, both hemispheres
108.2
2126
Male, age 61, both hemispheres
103.8
2365
Male, age 74, right hemisphere
95.0
2327
Male, age 80, both hemispheres
91.4
2697
Female, age 85, both hemispheres
87.3
Motor trigeminal nucleus nTPM: 97.8
2335
Male, age 61, both hemispheres
109.1
2309
Male, age 76, both hemispheres
104.4
2079
Male, age 80, both hemispheres
99.2
2321
Female, age 91, both hemispheres
97.7
2560
Male, age 74, both hemispheres
78.5
Nuclei of the trapezoid body nTPM: 97.2
1983
Male, age 76, both hemispheres
132.7
2735
Female, age 85, both hemispheres
97.6
2166
Male, age 80, both hemispheres
92.9
2368
Female, age 91, both hemispheres
84.6
2159
Male, age 61, both hemispheres
78.0
Nucleus raphe magnus nTPM: 97.8
2051
Male, age 76, both hemispheres
119.3
2455
Male, age 74, both hemispheres
103.2
2328
Male, age 80, both hemispheres
98.4
2172
Female, age 85, both hemispheres
96.5
2160
Male, age 61, both hemispheres
85.5
2459
Female, age 91, both hemispheres
84.1
Paramedian reticular nucleus nTPM: 95.9
2052
Male, age 76, both hemispheres
104.0
2050
Female, age 85, both hemispheres
100.7
2057
Male, age 80, both hemispheres
97.8
2313
Male, age 61, both hemispheres
81.0
Pedunculopontine tegmental nucleus nTPM: 135.9
2338
Male, age 61, both hemispheres
155.4
1921
Female, age 85, both hemispheres
139.4
2334
Male, age 80, both hemispheres
113.0
Pontine nuclei nTPM: 90.8
2787
Female, age 85, both hemispheres
107.3
1968
Male, age 76, left hemisphere
106.6
2115
Male, age 80, left hemisphere
100.2
1863
Male, age 55, unknown
87.9
2319
Female, age 91, both hemispheres
86.3
2454
Male, age 74, left hemisphere
84.6
2727
Male, age 61, right hemisphere
80.4
2109
Female, age 72, unknown
73.4
Pontine raphe nucleus nTPM: 103.6
2122
Female, age 85, midline
109.2
2853
Male, age 76, midline
98.0
Posteroventral cochlear nucleus nTPM: 100.1
2070
Male, age 76, both hemispheres
122.3
2752
Female, age 85, both hemispheres
113.5
2341
Male, age 80, both hemispheres
89.6
2135
Female, age 91, both hemispheres
88.6
2371
Male, age 61, both hemispheres
86.3
Principal sensory trigeminal nucleus nTPM: 92.4
2324
Male, age 76, both hemispheres
99.7
2008
Male, age 80, left hemisphere
97.0
2158
Male, age 61, both hemispheres
88.0
2367
Female, age 91, left hemisphere
84.9
Reticular pontine nucleus, caudal nTPM: 100.7
2092
Male, age 76, both hemispheres
118.1
2457
Female, age 91, both hemispheres
112.6
2332
Male, age 80, right hemisphere
96.9
2559
Male, age 74, both hemispheres
75.3
Reticular pontine nucleus, oral nTPM: 99.4
2167
Male, age 76, both hemispheres
117.8
1939
Male, age 80, both hemispheres
101.2
2366
Female, age 91, both hemispheres
93.9
2012
Female, age 85, both hemispheres
93.1
2361
Male, age 74, both hemispheres
91.0
Reticulotegmental nucleus nTPM: 107.9
2322
Female, age 91, both hemispheres
133.9
2333
Male, age 80, both hemispheres
113.1
2452
Male, age 74, both hemispheres
99.4
2325
Male, age 76, both hemispheres
85.3
Spinal trigeminal nucleus, oral nTPM: 106.3
2737
Female, age 85, both hemispheres
113.7
1978
Male, age 76, both hemispheres
109.6
2164
Male, age 80, both hemispheres
95.7
Subcoeruleus area nTPM: 102.1
2323
Female, age 91, left hemisphere
113.3
2451
Male, age 74, both hemispheres
105.8
1958
Male, age 80, both hemispheres
104.1
2369
Female, age 85, left hemisphere
94.0
2089
Male, age 76, left hemisphere
93.4
Superior olive nTPM: 93.0
2020
Male, age 76, both hemispheres
110.6
2364
Male, age 74, right hemisphere
96.6
1875
Female, age 85, both hemispheres
95.1
2561
Female, age 91, both hemispheres
84.9
2329
Male, age 80, right hemisphere
77.6
Ventral periolivary nuclei nTPM: 98.5
2130
Female, age 85, both hemispheres
105.6
2165
Male, age 80, both hemispheres
103.3
2794
Female, age 91, left hemisphere
93.5
2023
Male, age 76, both hemispheres
91.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 98.2
2359
Male, age 61, both hemispheres
112.9
1959
Male, age 76, both hemispheres
101.7
2161
Male, age 80, both hemispheres
100.2
2449
Male, age 74, both hemispheres
94.8
2840
Female, age 85, both hemispheres
92.1
2456
Female, age 91, both hemispheres
87.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
