We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MORN2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • MORN2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:60.5 nTPM
HPA Brain:21.6 nTPM
GTEx:60.5 nTPM
FANTOM5:83.6 Scaled Tags Per Million
Pig:41.0 nTPM
Mouse:45.3 nTPM
Allen mouse:0.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 21.6
2481 Female, age 94, left hemisphere 28.2
1854 Male, age 80, left hemisphere 24.1
2846 Female, age 79, unknown 23.1
1857 Female, age 85, left hemisphere 22.8
2290 Female, age 72, unknown 20.9
2289 Male, age 61, right hemisphere 20.6
2288 Male, age 75, left hemisphere 18.1
1781 Male, age 74, unknown 14.9
Globus pallidus, externus
nTPM: 14.8
1996 Male, age 80, right hemisphere 20.2
2772 Female, age 79, unknown 20.1
2395 Male, age 75, both hemispheres 15.1
2646 Male, age 61, right hemisphere 9.8
2567 Female, age 72, unknown 8.6
Globus pallidus, internus
nTPM: 14.9
2483 Female, age 94, right hemisphere 22.2
2037 Male, age 80, right hemisphere 18.7
1818 Male, age 74, unknown 16.8
2778 Female, age 91, both hemispheres 14.2
2287 Male, age 75, right hemisphere 13.3
2111 Female, age 85, right hemisphere 10.2
2566 Female, age 72, unknown 8.9
Nucleus accumbens
nTPM: 21.4
1856 Female, age 91, right hemisphere 30.0
2286 Male, age 75, left hemisphere 22.4
2732 Male, age 80, right hemisphere 22.2
2824 Male, age 61, right hemisphere 22.1
2698 Female, age 72, unknown 19.8
1806 Female, age 85, left hemisphere 19.7
1783 Male, age 74, unknown 18.3
2391 Female, age 94, left hemisphere 16.7
Nucleus basalis of Meynert
nTPM: 13.9
2393 Male, age 80, right hemisphere 18.9
2484 Female, age 94, left hemisphere 13.2
2821 Male, age 75, both hemispheres 11.8
2569 Male, age 61, both hemispheres 11.5
Nucleus of the diagonal band
nTPM: 15.6
1812 Female, age 91, both hemispheres 21.1
2775 Male, age 80, right hemisphere 15.6
2029 Male, age 61, right hemisphere 14.8
1979 Male, age 74, unknown 14.4
2195 Female, age 85, both hemispheres 12.3
Putamen
nTPM: 18.7
2482 Female, age 94, left hemisphere 23.0
1838 Male, age 80, right hemisphere 22.5
1937 Female, age 91, right hemisphere 21.0
2466 Female, age 79, unknown 20.6
1829 Male, age 74, unknown 17.4
2489 Female, age 72, unknown 13.5
2647 Male, age 75, left hemisphere 12.9
Septal nuclei
nTPM: 16.8
2009 Female, age 91, both hemispheres 23.0
2629 Female, age 94, right hemisphere 21.2
2199 Male, age 80, right hemisphere 17.5
2031 Female, age 72, unknown 17.0
1960 Male, age 74, unknown 14.4
2059 Female, age 85, both hemispheres 12.4
2394 Male, age 61, left hemisphere 12.0
Stria terminalis, bed nucleus
nTPM: 14.2
2486 Female, age 94, both hemispheres 16.0
1974 Female, age 91, both hemispheres 15.3
2201 Male, age 74, unknown 11.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 56.9
Samples: 246

Max nTPM: 140.2
Min nTPM: 24.4
Std nTPM: 18.6
Median nTPM: 53.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 140.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 129.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 123.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 114.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 104.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 104.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 102.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 101.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 101.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 96.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 96.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 96.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 93.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 90.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 89.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 86.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 85.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 85.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 85.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 84.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 84.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 83.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 81.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 80.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 79.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 78.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 78.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 78.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 78.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 78.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 77.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 77.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 77.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 75.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 75.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 73.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 73.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 72.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 72.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 72.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 71.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 71.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 69.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 67.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 67.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 67.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 67.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 66.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 66.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 66.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 66.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 66.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 65.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 65.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 65.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 64.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 64.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 63.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 63.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 63.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 63.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 62.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 62.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 62.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 62.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 61.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 61.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 61.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 61.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 61.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 61.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 60.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 60.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 59.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 59.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 59.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 59.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 59.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 58.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 58.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 58.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 58.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 57.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 57.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 57.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 56.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 56.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 56.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 56.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 56.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 55.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 55.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 55.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 55.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 55.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 55.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 54.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 54.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 53.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 53.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 52.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 52.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 52.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 52.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 52.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 52.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 51.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 50.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 50.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 50.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 50.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 50.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 50.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 50.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 49.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 49.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 49.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 49.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 49.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 49.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 49.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 48.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 48.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 48.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 48.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 48.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 47.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 47.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 47.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 46.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 46.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 46.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 46.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 46.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 46.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 45.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 45.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 45.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 45.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 45.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 44.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 44.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 44.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 44.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 44.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 42.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 42.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 42.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 42.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 42.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 42.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 42.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 41.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 41.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 41.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 41.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 41.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 41.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 40.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 40.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 40.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 40.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 40.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 40.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 40.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 40.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 39.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 37.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 36.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 35.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 35.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 35.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 34.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 34.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 33.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 33.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 31.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 31.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 31.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 30.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 30.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 30.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 30.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 30.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 29.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 29.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 24.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 60.5
Samples: 246

Max nTPM: 164.6
Min nTPM: 28.1
Std nTPM: 18.1
Median nTPM: 57.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 164.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 127.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 126.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 125.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 118.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 116.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 102.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 100.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 99.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 95.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 93.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 88.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 87.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 87.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 87.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 86.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 84.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 84.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 82.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 81.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 80.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 80.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 79.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 79.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 78.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 77.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 77.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 77.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 76.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 76.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 76.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 76.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 76.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 76.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 75.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 75.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 75.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 75.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 75.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 75.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 74.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 73.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 72.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 72.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 72.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 72.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 72.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 71.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 71.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 71.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 70.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 70.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 70.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 69.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 69.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 69.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 69.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 68.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 67.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 67.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 67.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 67.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 66.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 66.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 66.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 65.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 65.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 65.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 65.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 65.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 65.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 64.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 64.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 63.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 62.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 62.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 61.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 61.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 61.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 61.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 61.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 61.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 61.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 61.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 61.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 61.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 61.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 61.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 61.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 60.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 60.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 60.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 60.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 60.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 60.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 59.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 59.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 59.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 59.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 59.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 58.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 58.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 58.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 58.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 58.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 58.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 58.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 58.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 58.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 58.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 58.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 57.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 57.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 57.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 57.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 57.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 56.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 56.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 56.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 56.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 56.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 55.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 55.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 55.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 55.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 54.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 54.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 54.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 54.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 54.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 54.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 54.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 54.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 54.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 54.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 54.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 53.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 53.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 53.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 53.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 53.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 52.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 52.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 52.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 52.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 51.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 51.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 51.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 51.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 51.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 51.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 50.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 50.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 50.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 50.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 50.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 49.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 49.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 49.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 49.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 49.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 49.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 48.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 48.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 48.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 48.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 48.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 48.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 48.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 47.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 47.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 46.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 46.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 46.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 46.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 46.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 46.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 45.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 45.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 45.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 45.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 45.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 45.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 44.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 44.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 44.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 44.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 43.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 43.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 42.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 42.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 42.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 42.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 41.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 41.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 40.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 39.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 39.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 38.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 38.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 38.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 38.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 37.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 36.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 36.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 35.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 35.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 35.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 33.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 33.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 33.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 33.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 31.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 30.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 28.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 52.1
Samples: 205

Max nTPM: 103.6
Min nTPM: 25.9
Std nTPM: 15.3
Median nTPM: 49.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 103.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 99.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 91.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 86.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 86.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 84.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 84.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 84.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 82.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 82.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 82.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 81.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 80.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 79.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 78.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 77.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 77.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 76.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 75.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 74.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 72.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 72.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 71.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 71.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 71.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 71.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 70.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 69.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 68.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 68.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 67.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 67.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 67.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 66.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 66.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 65.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 65.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 64.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 64.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 63.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 63.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 63.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 62.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 62.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 61.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 61.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 61.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 61.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 60.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 60.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 60.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 60.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 60.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 60.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 59.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 59.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 59.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 59.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 58.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 58.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 58.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 58.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 58.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 56.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 56.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 55.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 55.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 55.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 55.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 54.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 54.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 54.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 54.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 54.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 53.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 53.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 53.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 53.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 52.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 52.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 52.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 51.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 50.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 50.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 50.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 50.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 50.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 49.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 49.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 49.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 49.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 49.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 48.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 48.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 48.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 48.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 47.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 47.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 47.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 47.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 47.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 46.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 46.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 45.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 45.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 45.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 45.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 44.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 44.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 44.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 44.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 44.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 43.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 42.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 42.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 42.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 42.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 42.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 42.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 41.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 41.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 41.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 41.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 40.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 40.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 40.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 40.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 39.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 39.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 39.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 39.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 38.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 38.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 38.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 38.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 38.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 38.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 38.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 37.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 37.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 37.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 37.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 36.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 36.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 36.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 36.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 36.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 36.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 35.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 35.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 35.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 34.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 34.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 34.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 34.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 34.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 34.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 33.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 33.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 33.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 33.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 32.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 32.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 31.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 31.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 31.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 30.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 30.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 29.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 28.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 28.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 27.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.0
FF:10164-103B2 76 years, female 74.0
Nucleus accumbens
Scaled Tags Per Million: 64.6
FF:10037-101F1 23-56 years, mixed 64.6
Putamen
Scaled Tags Per Million: 83.6
FF:10176-103C5 60 years, female 83.6
Globus pallidus
Scaled Tags Per Million: 57.0
FF:10175-103C4 60 years, female 84.7
FF:10161-103A8 76 years, female 29.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.0
Pig sample Sample description nTPM
Caudate
nTPM: 38.3
Samples: 4

Max nTPM: 42.6
Min nTPM: 34.0
Sample A Female 42.6
Sample B Female 38.3
Sample C Male 38.4
Sample D Male 34.0
Putamen
nTPM: 41.0
Samples: 4

Max nTPM: 57.7
Min nTPM: 32.5
Sample A Female 35.8
Sample B Female 32.5
Sample C Male 57.7
Sample D Male 38.0
Septum
nTPM: 40.7
Samples: 4

Max nTPM: 46.1
Min nTPM: 33.7
Sample A Female 43.9
Sample B Female 33.7
Sample C Male 39.0
Sample D Male 46.1
Ventral pallidum
nTPM: 31.9
Samples: 4

Max nTPM: 36.8
Min nTPM: 25.4
Sample A Female 36.8
Sample B Female 34.1
Sample C Male 25.4
Sample D Male 31.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 37.5
Samples: 4

Max nTPM: 39.2
Min nTPM: 36.1
Sample A Male 39.2
Sample B Male 37.2
Sample C Female 37.3
Sample D Female 36.1
Septum
nTPM: 45.3
Samples: 4

Max nTPM: 49.1
Min nTPM: 41.5
Sample A Male 41.5
Sample B Male 44.9
Sample C Female 49.1
Sample D Female 45.8
Ventral forebrain
nTPM: 31.3
Samples: 4

Max nTPM: 33.4
Min nTPM: 29.2
Sample A Male 30.6
Sample B Male 29.2
Sample C Female 32.1
Sample D Female 33.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71210514 Antisense, RP_050810_04_C12, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71210514 Antisense, RP_050810_04_C12, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org