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SLC38A3
HPA
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  • SLC38A3
TISSUE LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:321.4 nTPM
HPA:321.4 nTPM
GTEx:272.6 nTPM
FANTOM5:451.2 Scaled Tags Per Million

LIVER - Annotated protein expression
Pending normal tissue analysis

LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

321.4
N/A
Female, age 60
Liver sample 21
nTPM: 221.5
overview
Male, age 54
Liver sample 23
nTPM: 398.5
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 376.3
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 200.8
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 186.2
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 337.5
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 291.4
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 429
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 301.7
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 470.9
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.6
GTEx sample id Sample description nTPM
Liver
Average nTPM: 272.6
Samples: 226

Max nTPM: 760.7
Min nTPM: 6.1
Std nTPM: 173.7
Median nTPM: 243.0
GTEX-14JG1-1626-SM-664NH 40-49 years, male 760.7
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 746.0
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 716.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 703.2
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 664.5
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 646.7
GTEX-18A7A-1526-SM-72D69 50-59 years, female 646.1
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 615.7
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 615.2
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 611.0
GTEX-11ZUS-2526-SM-59872 30-39 years, male 606.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 599.7
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 588.6
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 580.2
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 578.9
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 568.8
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 565.8
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 556.7
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 552.1
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 544.6
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 530.1
GTEX-YECK-1926-SM-4W21H 60-69 years, male 518.1
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 509.9
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 509.8
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 499.4
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 473.7
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 473.3
GTEX-RN64-1826-SM-48FDV 50-59 years, male 472.7
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 471.6
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 468.2
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 464.2
GTEX-11GSP-0626-SM-5986T 60-69 years, female 460.0
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 460.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 459.6
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 458.4
GTEX-14E7W-1526-SM-6871X 70-79 years, male 457.0
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 454.8
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 450.6
GTEX-144GL-1426-SM-79OMA 50-59 years, male 447.1
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 445.9
GTEX-18465-1626-SM-7LG6N 50-59 years, male 437.0
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 437.0
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 434.3
GTEX-14PHX-0526-SM-664NW 50-59 years, male 429.1
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 428.3
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 427.9
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 427.4
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 420.4
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 417.9
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 413.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 410.5
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 403.8
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 401.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 397.0
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 396.8
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 396.8
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 396.6
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 396.4
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 395.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 394.5
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 392.6
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 391.5
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 390.5
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 384.5
GTEX-13112-1426-SM-5EGH8 50-59 years, male 384.2
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 382.5
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 373.6
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 371.5
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 366.8
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 362.3
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 359.2
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 355.6
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 354.3
GTEX-1399T-0826-SM-5IFES 60-69 years, male 354.2
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 351.2
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 348.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 346.7
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 346.4
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 343.0
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 340.4
GTEX-17F96-1226-SM-79OK2 70-79 years, male 336.6
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 333.6
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 329.4
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 328.1
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 327.8
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 327.1
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 325.9
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 325.4
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 325.3
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 325.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 312.5
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 306.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 303.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 287.0
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 284.2
GTEX-17HHE-0126-SM-79398 50-59 years, male 281.5
GTEX-1B933-1226-SM-731DW 50-59 years, female 278.3
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 269.4
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 269.4
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 267.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 266.9
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 266.2
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 262.9
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 261.5
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 260.6
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 258.9
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 258.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 255.4
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 253.7
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 250.6
GTEX-REY6-1226-SM-48FDR 60-69 years, male 249.0
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 246.5
GTEX-R53T-0326-SM-48FEC 50-59 years, female 243.1
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 243.0
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 242.9
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 242.9
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 241.6
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 237.6
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 236.6
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 234.9
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 233.8
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 228.0
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 225.3
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 224.1
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 222.9
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 220.7
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 219.1
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 209.7
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 208.6
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 208.0
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 206.8
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 206.4
GTEX-P78B-1326-SM-3P611 40-49 years, female 201.8
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 198.1
GTEX-Q734-0326-SM-48U15 40-49 years, female 195.9
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 194.3
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 193.1
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 189.8
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 189.3
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 188.2
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 187.1
GTEX-13113-1326-SM-5GCOI 60-69 years, female 186.1
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 185.7
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 184.4
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 182.3
GTEX-18A66-2026-SM-7189C 60-69 years, male 181.9
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 178.1
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 176.8
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 172.9
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 171.9
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 171.8
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 167.6
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 164.8
GTEX-RU72-1426-SM-46MUF 50-59 years, female 162.3
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 161.8
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 161.5
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 161.4
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 157.7
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 155.8
GTEX-X261-1726-SM-4PQYT 50-59 years, male 149.8
GTEX-12696-0826-SM-5EGGE 60-69 years, male 145.7
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 145.3
GTEX-S33H-1626-SM-4AD68 30-39 years, male 140.7
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 137.8
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 137.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 136.4
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 134.6
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 132.6
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 130.9
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 121.9
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 121.0
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 120.6
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 119.7
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 119.2
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 118.4
GTEX-1B932-1426-SM-793AN 40-49 years, female 118.3
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 115.7
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 115.2
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 115.0
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 111.1
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 110.9
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 110.8
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 110.8
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 107.3
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 101.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 100.5
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 98.7
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 98.6
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 97.6
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 97.1
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 96.0
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 95.3
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 94.5
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 93.5
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 93.0
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 91.9
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 90.9
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 74.8
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 74.5
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 73.8
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 72.3
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 67.4
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 60.6
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 58.9
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 53.0
GTEX-O5YV-0726-SM-EV798 60-69 years, female 51.3
GTEX-QEL4-1226-SM-447A4 50-59 years, male 50.3
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 49.9
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 45.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 41.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 39.7
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 38.1
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 33.3
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 32.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 31.6
GTEX-14PJO-1726-SM-68719 60-69 years, male 25.7
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 25.2
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 24.3
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 22.9
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 18.3
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 16.5
GTEX-S32W-1926-SM-4AD63 50-59 years, female 15.8
GTEX-14XAO-0226-SM-68728 60-69 years, female 13.3
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 6.6
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 6.4
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 6.1
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

451.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 451.2
FF:10018-101C9 64,69,70 years, mixed 451.2

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