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CIBAR1
HPA
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  • CIBAR1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CIBAR1
Synonyms BARMR1, FAM92A, FAM92A1, FLJ38979
Gene descriptioni

Full gene name according to HGNC.

CBY1 interacting BAR domain containing 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband q22.1
Chromosome location (bp) 93698561 - 93731527
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000188343 (version 109)
Entrez gene 137392
HGNC HGNC:30452
UniProt A1XBS5 (UniProt - Evidence at protein level)
neXtProt NX_A1XBS5
GeneCards CIBAR1
Antibodypedia CIBAR1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Acts as a positive regulator of ciliary hedgehog signaling (By similarity). Probable regulator of ciliogenesis involved in limb morphogenesis 1, 2. In cooperation with CBY1 it is involved in the recruitment and fusion of endosomal vesicles at distal appendages during early stages of ciliogenesis 3, 4. Plays an important role in the mitochondrial function and is essential for maintaining mitochondrial morphology and inner membrane ultrastructure 5. In vitro, can generate membrane curvature through preferential interaction with negatively charged phospholipids such as phosphatidylinositol 4,5-bisphosphate and cardiolipin and hence orchestrate cristae shape 6.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cilium biogenesis/degradation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables phospholipid binding activity. Involved in several processes, including inner mitochondrial membrane organization; limb morphogenesis; and membrane tubulation. Located in several cellular components, including centriole; ciliary base; and mitochondrial crista. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CIBAR1-202
ENSP00000401774
ENST00000423990
A1XBS5
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0007007 [inner mitochondrial membrane organization]
GO:0016020 [membrane]
GO:0019898 [extrinsic component of membrane]
GO:0030030 [cell projection organization]
GO:0030061 [mitochondrial crista]
GO:0035108 [limb morphogenesis]
GO:0035869 [ciliary transition zone]
GO:0036064 [ciliary basal body]
GO:0042995 [cell projection]
GO:0045880 [positive regulation of smoothened signaling pathway]
GO:0060271 [cilium assembly]
GO:0061024 [membrane organization]
GO:0097546 [ciliary base]
GO:0097749 [membrane tubulation]
Show all
251 aa
29 kDa
No 0
CIBAR1-204
ENSP00000428874
ENST00000517718
E5RFH7
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
134 aa
15.5 kDa
No 0
CIBAR1-206
ENSP00000429367
ENST00000518322
A1XBS5
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005543 [phospholipid binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0005929 [cilium]
GO:0007007 [inner mitochondrial membrane organization]
GO:0016020 [membrane]
GO:0019898 [extrinsic component of membrane]
GO:0030030 [cell projection organization]
GO:0030061 [mitochondrial crista]
GO:0035108 [limb morphogenesis]
GO:0035869 [ciliary transition zone]
GO:0036064 [ciliary basal body]
GO:0042995 [cell projection]
GO:0045880 [positive regulation of smoothened signaling pathway]
GO:0060271 [cilium assembly]
GO:0061024 [membrane organization]
GO:0097546 [ciliary base]
GO:0097749 [membrane tubulation]
Show all
289 aa
33.4 kDa
No 0
CIBAR1-207
ENSP00000428446
ENST00000518829
E5RID3
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
110 aa
13 kDa
No 0
CIBAR1-208
ENSP00000428633
ENST00000519135
E5RHA4
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
37 aa
4.4 kDa
No 0
CIBAR1-209
ENSP00000429955
ENST00000519679
E5RGP4
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
114 aa
13.1 kDa
No 0
CIBAR1-212
ENSP00000427991
ENST00000520955
E5RFS7
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
65 aa
7.7 kDa
No 0
CIBAR1-213
ENSP00000428751
ENST00000521641
E5RFH7
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
134 aa
15.5 kDa
No 0
CIBAR1-214
ENSP00000430069
ENST00000522324
A0A0B4J212
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005814 [centriole]
Show all
162 aa
18.8 kDa
No 0
CIBAR1-215
ENSP00000428739
ENST00000522803
E5RGD0
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
168 aa
19.4 kDa
No 0
CIBAR1-216
ENSP00000430812
ENST00000523453
H0YC32
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0030030 [cell projection organization]
GO:0060271 [cilium assembly]
Show all
188 aa
21.3 kDa
No 0
CIBAR1-217
ENSP00000430217
ENST00000523475
E5RGE3
[Direct mapping] CBY1-interacting BAR domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
Protein evidence (Ezkurdia et al 2014)
Show all
79 aa
9.3 kDa
No 0

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