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S100A16
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  • S100A16
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:94.4 nTPM
HPA Brain:49.0 nTPM
GTEx:94.4 nTPM
FANTOM5:29.4 Scaled Tags Per Million
Pig:272.4 nTPM
Mouse:159.3 nTPM
Allen mouse:2.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045841
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 36.3
1854 Male, age 80, left hemisphere 51.7
2290 Female, age 72, unknown 42.5
2481 Female, age 94, left hemisphere 40.2
1857 Female, age 85, left hemisphere 39.9
1781 Male, age 74, unknown 38.9
2846 Female, age 79, unknown 31.7
2289 Male, age 61, right hemisphere 23.0
2288 Male, age 75, left hemisphere 22.5
Globus pallidus, externus
nTPM: 49.0
2646 Male, age 61, right hemisphere 63.2
1996 Male, age 80, right hemisphere 61.0
2772 Female, age 79, unknown 44.1
2567 Female, age 72, unknown 42.6
2395 Male, age 75, both hemispheres 34.2
Globus pallidus, internus
nTPM: 44.8
2483 Female, age 94, right hemisphere 58.5
2037 Male, age 80, right hemisphere 49.5
1818 Male, age 74, unknown 48.4
2566 Female, age 72, unknown 41.6
2111 Female, age 85, right hemisphere 40.4
2287 Male, age 75, right hemisphere 38.5
2778 Female, age 91, both hemispheres 36.4
Nucleus accumbens
nTPM: 32.8
2732 Male, age 80, right hemisphere 42.6
1806 Female, age 85, left hemisphere 41.9
2698 Female, age 72, unknown 38.7
1783 Male, age 74, unknown 32.1
1856 Female, age 91, right hemisphere 31.8
2391 Female, age 94, left hemisphere 28.4
2286 Male, age 75, left hemisphere 25.0
2824 Male, age 61, right hemisphere 21.7
Nucleus basalis of Meynert
nTPM: 46.6
2569 Male, age 61, both hemispheres 73.5
2393 Male, age 80, right hemisphere 44.2
2484 Female, age 94, left hemisphere 39.9
2821 Male, age 75, both hemispheres 28.8
Nucleus of the diagonal band
nTPM: 30.3
1812 Female, age 91, both hemispheres 34.0
2775 Male, age 80, right hemisphere 32.4
1979 Male, age 74, unknown 30.9
2195 Female, age 85, both hemispheres 29.7
2029 Male, age 61, right hemisphere 24.4
Putamen
nTPM: 36.7
2489 Female, age 72, unknown 42.2
2647 Male, age 75, left hemisphere 40.7
1838 Male, age 80, right hemisphere 40.5
2482 Female, age 94, left hemisphere 39.1
1829 Male, age 74, unknown 33.0
2466 Female, age 79, unknown 33.0
1937 Female, age 91, right hemisphere 28.6
Septal nuclei
nTPM: 34.8
2059 Female, age 85, both hemispheres 47.2
2199 Male, age 80, right hemisphere 40.2
2394 Male, age 61, left hemisphere 39.8
2031 Female, age 72, unknown 31.6
1960 Male, age 74, unknown 29.9
2009 Female, age 91, both hemispheres 29.5
2629 Female, age 94, right hemisphere 25.6
Stria terminalis, bed nucleus
nTPM: 26.2
2201 Male, age 74, unknown 30.8
1974 Female, age 91, both hemispheres 27.2
2486 Female, age 94, both hemispheres 20.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 72.7
Samples: 246

Max nTPM: 227.9
Min nTPM: 21.3
Std nTPM: 36.1
Median nTPM: 65.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 227.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 209.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 207.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 206.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 197.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 178.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 175.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 163.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 151.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 150.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 145.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 137.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 135.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 134.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 132.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 129.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 129.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 128.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 125.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 124.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 121.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 119.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 116.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 114.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 114.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 111.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 108.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 108.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 107.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 106.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 106.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 105.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 104.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 104.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 102.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 102.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 101.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 100.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 100.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 99.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 99.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 98.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 98.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 97.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 97.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 97.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 94.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 94.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 93.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 93.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 92.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 91.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 90.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 89.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 88.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 88.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 88.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 88.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 87.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 85.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 85.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 84.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 82.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 81.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 79.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 79.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 78.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 78.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 77.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 77.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 76.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 73.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 72.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 72.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 72.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 71.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 70.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 69.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 69.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 68.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 66.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 66.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 66.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 65.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 65.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 63.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 63.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 63.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 62.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 62.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 62.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 62.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 61.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 60.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 60.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 60.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 59.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 58.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 58.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 56.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 55.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 53.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 52.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 52.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 51.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 47.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 47.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 46.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 45.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 45.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 45.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 45.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 44.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 44.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 44.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 44.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 43.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 43.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 43.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 42.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 42.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 42.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 41.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 40.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 40.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 40.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 40.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 39.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 39.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 39.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 39.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 39.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 38.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 36.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 36.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 36.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 35.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 35.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 34.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 34.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 33.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 32.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 32.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 32.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 30.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 29.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 27.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 24.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 22.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 79.1
Samples: 246

Max nTPM: 483.4
Min nTPM: 24.5
Std nTPM: 49.9
Median nTPM: 63.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 483.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 244.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 221.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 215.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 212.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 210.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 203.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 199.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 194.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 191.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 183.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 183.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 170.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 170.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 163.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 155.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 154.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 150.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 148.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 146.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 145.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 141.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 141.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 141.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 140.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 139.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 138.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 137.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 136.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 135.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 134.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 134.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 133.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 132.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 127.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 125.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 123.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 122.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 121.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 121.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 119.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 118.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 118.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 117.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 115.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 113.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 110.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 110.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 110.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 109.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 109.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 107.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 105.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 103.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 102.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 99.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 97.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 97.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 96.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 95.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 93.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 92.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 92.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 92.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 91.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 91.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 91.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 90.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 90.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 90.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 88.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 85.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 85.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 84.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 83.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 83.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 83.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 82.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 82.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 82.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 80.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 80.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 79.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 78.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 77.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 76.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 76.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 76.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 75.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 75.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 75.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 75.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 74.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 73.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 73.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 73.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 72.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 72.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 71.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 71.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 71.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 70.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 70.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 70.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 70.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 70.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 70.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 68.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 68.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 68.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 66.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 66.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 65.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 65.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 65.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 64.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 64.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 64.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 63.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 63.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 63.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 62.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 62.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 62.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 60.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 59.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 59.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 58.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 58.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 58.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 57.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 57.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 56.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 56.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 56.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 56.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 56.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 56.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 55.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 55.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 55.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 55.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 55.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 55.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 55.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 54.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 54.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 54.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 54.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 54.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 54.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 53.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 53.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 53.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 53.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 52.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 52.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 52.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 52.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 51.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 51.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 51.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 51.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 50.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 50.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 50.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 48.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 48.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 48.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 47.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 46.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 46.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 46.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 45.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 45.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 45.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 45.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 45.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 45.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 44.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 43.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 43.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 43.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 42.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 42.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 42.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 41.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 41.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 41.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 41.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 41.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 40.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 39.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 39.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 39.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 39.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 39.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 39.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 38.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 38.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 38.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 38.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 38.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 38.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 37.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 37.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 36.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 35.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 35.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 35.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 35.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 35.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 33.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 33.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 33.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 33.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 33.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 32.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 31.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 30.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 30.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 29.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 29.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 27.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 24.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 24.5
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Brain - Putamen (basal ganglia)
Average nTPM: 94.4
Samples: 205

Max nTPM: 230.8
Min nTPM: 29.4
Std nTPM: 44.9
Median nTPM: 87.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 230.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 222.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 219.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 219.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 218.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 203.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 199.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 195.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 191.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 182.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 182.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 182.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 178.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 178.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 178.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 172.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 171.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 171.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 169.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 168.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 166.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 162.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 158.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 156.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 155.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 154.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 152.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 150.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 149.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 148.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 146.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 144.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 142.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 142.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 141.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 139.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 139.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 134.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 133.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 131.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 130.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 129.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 127.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 125.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 125.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 122.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 122.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 121.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 120.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 120.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 120.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 119.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 115.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 115.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 113.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 111.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 110.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 110.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 109.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 108.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 106.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 105.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 104.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 104.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 103.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 103.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 102.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 102.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 101.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 99.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 99.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 98.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 98.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 96.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 96.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 96.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 95.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 95.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 95.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 95.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 95.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 94.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 94.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 93.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 93.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 91.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 91.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 91.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 91.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 91.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 91.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 90.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 90.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 89.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 89.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 89.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 89.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 89.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 87.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 87.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 87.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 87.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 86.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 86.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 85.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 85.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 83.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 83.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 82.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 80.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 80.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 79.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 78.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 77.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 77.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 76.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 74.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 74.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 73.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 72.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 71.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 71.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 70.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 70.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 70.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 70.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 69.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 69.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 68.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 68.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 67.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 67.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 67.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 66.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 65.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 65.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 65.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 65.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 65.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 64.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 61.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 60.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 60.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 60.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 59.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 59.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 58.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 58.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 58.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 57.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 56.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 54.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 54.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 54.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 54.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 53.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 52.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 52.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 51.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 51.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 50.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 50.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 50.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 50.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 50.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 49.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 49.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 49.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 47.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 47.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 47.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 47.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 46.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 45.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 44.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 44.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 44.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 42.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 42.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 41.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 35.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 33.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 32.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 32.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 31.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 30.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 29.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

29.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 26.9
FF:10164-103B2 76 years, female 26.9
Nucleus accumbens
Scaled Tags Per Million: 29.4
FF:10037-101F1 23-56 years, mixed 29.4
Putamen
Scaled Tags Per Million: 23.4
FF:10176-103C5 60 years, female 23.4
Globus pallidus
Scaled Tags Per Million: 21.3
FF:10161-103A8 76 years, female 23.8
FF:10175-103C4 60 years, female 18.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.4
Pig sample Sample description nTPM
Caudate
nTPM: 215.7
Samples: 4

Max nTPM: 264.6
Min nTPM: 174.5
Sample A Female 174.5
Sample B Female 240.7
Sample C Male 264.6
Sample D Male 182.8
Putamen
nTPM: 272.5
Samples: 4

Max nTPM: 311.8
Min nTPM: 196.1
Sample A Female 303.4
Sample B Female 196.1
Sample C Male 311.8
Sample D Male 278.6
Septum
nTPM: 198.0
Samples: 4

Max nTPM: 209.2
Min nTPM: 180.1
Sample A Female 209.2
Sample B Female 196.8
Sample C Male 180.1
Sample D Male 205.8
Ventral pallidum
nTPM: 210.3
Samples: 4

Max nTPM: 233.4
Min nTPM: 191.2
Sample A Female 191.2
Sample B Female 233.4
Sample C Male 220.0
Sample D Male 196.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 159.3
Samples: 4

Max nTPM: 171.5
Min nTPM: 142.0
Sample A Male 155.0
Sample B Male 171.5
Sample C Female 142.0
Sample D Female 168.7
Septum
nTPM: 150.1
Samples: 4

Max nTPM: 175.2
Min nTPM: 123.7
Sample A Male 123.7
Sample B Male 175.2
Sample C Female 159.3
Sample D Female 142.0
Ventral forebrain
nTPM: 127.5
Samples: 4

Max nTPM: 150.9
Min nTPM: 113.4
Sample A Male 125.5
Sample B Male 113.4
Sample C Female 150.9
Sample D Female 120.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.1
68341752 Antisense, RP_041207_02_B04, Mouse strain C57BL/6J (56 days, male) 2.8
77371787 Antisense, RP_070116_01_C03, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 2.3
68341752 Antisense, RP_041207_02_B04, Mouse strain C57BL/6J (56 days, male) 2.9
77371787 Antisense, RP_070116_01_C03, Mouse strain C57BL/6J (56 days, male) 1.7

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