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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
59.1
nTPM
HPA:
8.3
nTPM
GTEx:
59.1
nTPM
FANTOM5:
181.9
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
8.3
Male, age 65
Small intestine sample 232 nTPM: 5
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 7.7
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 10.1
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 10.5
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
59.1
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 59.1
Samples: 187
Max nTPM: 262.2
Min nTPM: 1.0
Std nTPM: 51.8
Median nTPM: 39.5
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
262.2
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
257.9
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
256.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
250.1
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
226.8
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
206.9
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
184.6
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
182.8
GTEX-117YX-0326-SM-5GICL
50-59 years, male
179.0
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
166.8
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
166.5
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
165.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
160.6
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
159.9
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
156.7
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
148.4
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
137.2
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
133.3
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
131.7
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
129.6
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
125.5
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
118.6
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
115.2
GTEX-13111-1426-SM-5DUW3
50-59 years, male
113.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
110.2
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
104.0
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
100.5
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
98.8
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
98.3
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
96.5
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
96.2
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
94.0
GTEX-1192X-2526-SM-59868
50-59 years, male
93.9
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
89.8
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
88.7
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
88.6
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
87.9
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
85.8
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
82.4
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
81.9
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
80.8
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
80.5
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
79.1
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
79.0
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
78.6
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
76.6
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
74.5
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
73.3
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
73.1
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
72.3
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
72.3
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
71.3
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
69.6
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
68.1
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
65.8
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
65.7
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
63.8
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
63.4
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
63.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
60.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
60.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
59.3
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
57.6
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
57.6
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
56.3
GTEX-13O61-1326-SM-5KM31
60-69 years, male
55.2
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
54.7
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
54.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
54.2
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
54.2
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
53.9
GTEX-14PKU-1626-SM-6871C
40-49 years, female
53.6
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
50.7
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
50.6
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
50.0
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
47.9
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
47.5
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
46.6
GTEX-13113-1226-SM-5EGHT
60-69 years, female
46.6
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
45.6
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
45.6
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
45.2
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
44.9
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
44.6
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
44.5
GTEX-1C475-1426-SM-793CH
40-49 years, female
44.2
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
43.4
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
43.2
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
41.9
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
41.5
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
41.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
41.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
40.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
39.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
39.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
38.9
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
38.4
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
38.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
38.0
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
37.7
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
37.7
GTEX-ZTSS-0926-SM-59865
40-49 years, male
37.5
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
37.3
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
37.2
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
36.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
35.6
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
35.5
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
34.9
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
34.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
34.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
34.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
33.7
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
33.5
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
33.5
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
33.4
GTEX-14PK6-1626-SM-6871I
70-79 years, female
33.1
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
33.0
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
32.7
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
32.7
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
32.5
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
32.4
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
32.4
GTEX-183FY-1626-SM-793D8
20-29 years, male
31.9
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
30.7
GTEX-1122O-1326-SM-5H11F
60-69 years, female
30.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
30.5
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
30.3
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
30.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
29.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
28.1
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
28.0
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
28.0
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
27.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
27.3
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
26.3
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
25.6
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
25.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
25.1
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
24.7
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
24.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
24.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
24.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
24.2
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
24.1
GTEX-14PN3-2026-SM-68729
60-69 years, female
24.0
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
23.9
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
23.5
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
23.5
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
22.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
22.7
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
22.6
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
22.5
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
22.5
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
22.3
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
22.1
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
21.9
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
21.8
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
21.2
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
20.6
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
20.4
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
20.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
20.3
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
20.2
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
20.1
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
19.8
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
19.4
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
19.2
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
18.5
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
18.1
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
17.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
17.3
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
16.8
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
14.6
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
14.3
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
14.1
GTEX-YFCO-1326-SM-664NV
40-49 years, male
13.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
13.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
12.4
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
11.7
GTEX-111YS-1426-SM-5GID8
60-69 years, male
11.5
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
10.2
GTEX-144GM-1026-SM-79OKU
20-29 years, male
9.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
9.3
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
9.0
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
7.3
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
6.5
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
1.0
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
