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KIR2DL4
HPA
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  • KIR2DL4
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

KIR2DL4
Synonyms 103AS, 15.212, CD158D
Gene descriptioni

Full gene name according to HGNC.

Killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 4
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

CD markers
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband q13.42
Chromosome location (bp) 54803610 - 54814517
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000189013 (version 109)
Entrez gene 3805
HGNC HGNC:6332
UniProt Q99706 (UniProt - Evidence at protein level)
neXtProt NX_Q99706
GeneCards KIR2DL4
Antibodypedia KIR2DL4 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor for non-classical major histocompatibility class Ib HLA-G molecules. Recognizes HLA-G in complex with B2M/beta-2 microglobulin and a nonamer self-peptide (peptide-bound HLA-G-B2M). In decidual NK cells, binds peptide-bound HLA-G-B2M complex and triggers NK cell senescence-associated secretory phenotype as a molecular switch to promote vascular remodeling and fetal growth in early pregnancy 1, 2, 3. May play a role in balancing tolerance and antiviral-immunity at maternal-fetal interface by keeping in check the effector functions of NK, CD8+ T cells and B cells 4, 5. Upon interaction with peptide-bound HLA-G-B2M, initiates signaling from the endosomal compartment leading to downstream activation of PRKDC-XRCC5 and AKT1, and ultimately triggering NF-kappa-B-dependent pro-inflammatory response 6.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Receptor
Gene summary (Entrez)i

Useful information about the gene from Entrez

Killer cell immunoglobulin-like receptors (KIRs) are transmembrane glycoproteins expressed by natural killer cells and subsets of T cells. The KIR genes are polymorphic and highly homologous and they are found in a cluster on chromosome 19q13.4 within the 1 Mb leukocyte receptor complex (LRC). The gene content of the KIR gene cluster varies among haplotypes, although several ""framework"" genes are found in all haplotypes (KIR3DL3, KIR3DP1, KIR3DL4, KIR3DL2). The KIR proteins are classified by the number of extracellular immunoglobulin domains (2D or 3D) and by whether they have a long (L) or short (S) cytoplasmic domain. KIR proteins with the long cytoplasmic domain transduce inhibitory signals upon ligand binding via an immune tyrosine-based inhibitory motif (ITIM), while KIR proteins with the short cytoplasmic domain lack the ITIM motif and instead associate with the TYRO protein tyrosine kinase binding protein to transduce activating signals. The ligands for several KIR proteins are subsets of HLA class I molecules; thus, KIR proteins are thought to play an important role in regulation of the immune response. This gene is one of the ""framework"" loci that is present on all haplotypes. Alternate alleles of this gene are represented on multiple alternate reference loci (ALT_REF_LOCs). Alternative splicing results in multiple transcript variants, some of which may not be annotated on the primary reference assembly. [provided by RefSeq, Jul 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
KIR2DL4-201
ENSP00000339634
ENST00000345540
Q99706
[Direct mapping] Killer cell immunoglobulin-like receptor 2DL4
Show all
A0A376A929
[Target identity:100%; Query identity:100%] KIR2DL4 protein
Show all
CD markers
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002729 [positive regulation of natural killer cell cytokine production]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0006968 [cellular defense response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0031901 [early endosome membrane]
GO:0032394 [MHC class Ib receptor activity]
GO:0045953 [negative regulation of natural killer cell mediated cytotoxicity]
GO:2000774 [positive regulation of cellular senescence]
Show all
342 aa
37.4 kDa
Yes 0
KIR2DL4-202
ENSP00000345331
ENST00000346587
Q8N736
[Direct mapping] Killer cell immunoglobulin-like receptor 2DL4
Show all
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Show all
247 aa
26.7 kDa
Yes 0
KIR2DL4-203
ENSP00000350088
ENST00000357494
Q99706
[Direct mapping] Killer cell immunoglobulin-like receptor 2DL4
Show all
A0A376A8K3
[Target identity:100%; Query identity:100%] KIR2DL4 protein
Show all
CD markers
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0002729 [positive regulation of natural killer cell cytokine production]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0006968 [cellular defense response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0031901 [early endosome membrane]
GO:0032394 [MHC class Ib receptor activity]
GO:0045953 [negative regulation of natural killer cell mediated cytotoxicity]
GO:2000774 [positive regulation of cellular senescence]
Show all
325 aa
35.6 kDa
Yes 0
KIR2DL4-204
ENSP00000351988
ENST00000359085
A0A0B4J1S6
[Direct mapping] Killer cell immunoglobulin-like receptor; Killer cell immunoglobulin-like receptor 2DL4
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
273 aa
30.3 kDa
Yes 1
KIR2DL4-205
ENSP00000379584
ENST00000396289
A8MT18
[Direct mapping] Killer cell immunoglobulin-like receptor 2DL4
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
398 aa
43.6 kDa
Yes 1
KIR2DL4-206
ENSP00000379588
ENST00000396293
Q99706
[Direct mapping] Killer cell immunoglobulin-like receptor 2DL4
Show all
CD markers
   MEMSAT3 predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002729 [positive regulation of natural killer cell cytokine production]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005886 [plasma membrane]
GO:0006968 [cellular defense response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0031901 [early endosome membrane]
GO:0032394 [MHC class Ib receptor activity]
GO:0045953 [negative regulation of natural killer cell mediated cytotoxicity]
GO:2000774 [positive regulation of cellular senescence]
Show all
230 aa
24.9 kDa
Yes 0

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