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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:111.3 nTPM
HPA Brain:127.9 nTPM
GTEx:111.3 nTPM
FANTOM5:296.8 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 105.7
1981 Female, age 72, midline 126.8
2816 Male, age 47, midline 109.5
2048 Male, age 55, midline 107.0
2194 Female, age 79, both hemispheres 105.0
2565 Male, age 75, midline 80.3
Cervical spinal cord, dorsal horn
nTPM: 114.0
2173 Female, age 72, unknown 162.7
2296 Male, age 66, both hemispheres 144.3
2069 Male, age 47, both hemispheres 108.6
1877 Male, age 55, unknown 103.6
2721 Male, age 90, both hemispheres 94.7
2297 Male, age 75, both hemispheres 70.3
Cervical spinal cord, ventral horn
nTPM: 127.9
2098 Female, age 72, unknown 168.4
2809 Male, age 90, both hemispheres 150.8
2068 Male, age 55, unknown 130.8
2820 Female, age 79, both hemispheres 114.0
2295 Male, age 66, both hemispheres 102.1
2480 Male, age 75, both hemispheres 101.3

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 111.3
Samples: 159

Max nTPM: 255.3
Min nTPM: 44.3
Std nTPM: 31.0
Median nTPM: 109.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 255.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 191.5
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 186.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 178.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 172.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 170.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 165.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 163.0
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 156.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 154.4
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 154.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 153.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 151.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 151.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 149.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 149.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 148.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 142.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 142.0
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 142.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 142.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 141.7
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 141.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 140.8
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 139.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 139.3
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 138.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 138.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 137.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 136.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 136.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 136.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 135.9
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 135.2
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 135.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 133.7
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 133.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 132.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 131.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 130.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 130.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 128.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 128.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 127.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 127.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 126.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 126.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 125.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 125.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 125.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 125.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 123.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 123.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 123.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 123.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 122.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 122.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 120.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 119.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 118.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 117.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 117.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 117.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 116.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 116.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 116.0
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 116.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 116.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 115.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 115.8
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 115.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 115.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 115.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 113.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 113.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 113.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 111.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 110.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 110.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 109.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 109.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 109.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 109.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 109.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 108.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 108.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 108.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 108.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 107.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 106.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 106.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 105.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 105.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 104.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 104.1
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 102.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 102.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 101.1
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 99.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 99.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 98.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 98.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 98.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 98.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 98.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 97.5
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 97.4
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 97.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 96.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 96.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 95.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 95.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 95.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 95.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 95.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 95.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 94.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 92.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 92.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 92.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 91.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 91.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 89.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 89.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 88.4
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 86.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 86.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 86.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 83.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 83.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 82.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 80.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 79.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 79.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 78.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 76.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 76.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 76.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 75.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 75.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 75.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 75.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 74.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 73.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 67.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 66.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 65.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 63.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 63.5
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 63.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 62.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 62.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 62.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 60.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 57.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 54.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 54.0
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 48.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 44.3
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

296.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 296.8
FF:10181-103D1 60 years, female 435.2
FF:10159-103A6 76 years, female 158.5

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