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TMEM120A
HPA
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  • TMEM120A
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TMEM120A
Synonyms NET29, TACAN, TMPIT
Gene descriptioni

Full gene name according to HGNC.

Transmembrane protein 120A
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q11.23
Chromosome location (bp) 75986831 - 75994656
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000189077 (version 109)
Entrez gene 83862
HGNC HGNC:21697
UniProt Q9BXJ8 (UniProt - Evidence at protein level)
neXtProt NX_Q9BXJ8
GeneCards TMEM120A
Antibodypedia TMEM120A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Ion channel involved in sensing mechanical pain. Contributes to mechanosensitive currents in nocireceptors and detecting mechanical pain stimuli (By similarity). May also be required for efficient adipogenesis 1.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable ion channel activity. Involved in fat cell differentiation; protein heterooligomerization; and protein homooligomerization. Predicted to be located in plasma membrane. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TMEM120A-201
ENSP00000480803
ENST00000417509
A0A024R4K9
[Direct mapping] Ion channel TACAN; Transmembrane protein induced by tumor necrosis factor alpha, isoform CRA_a
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0005637 [nuclear inner membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
322 aa
35.9 kDa
No 3
TMEM120A-203
ENSP00000484736
ENST00000439537
A0A087X266
[Direct mapping] Ion channel TACAN; Transmembrane protein induced by tumor necrosis factor alpha, isoform CRA_g
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0005637 [nuclear inner membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
369 aa
42.9 kDa
No 4
TMEM120A-209
ENSP00000479079
ENST00000480899
A0A087WV11
[Direct mapping] Ion channel TACAN
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0005637 [nuclear inner membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
229 aa
26.9 kDa
No 5
TMEM120A-211
ENSP00000482497
ENST00000485200
A0A087WZA9
[Direct mapping] Ion channel TACAN
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0005637 [nuclear inner membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
174 aa
20.5 kDa
No 2
TMEM120A-214
ENSP00000473983
ENST00000493111
Q9BXJ8
[Direct mapping] Ion channel TACAN
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003674 [molecular_function]
GO:0005216 [ion channel activity]
GO:0005515 [protein binding]
GO:0005575 [cellular_component]
GO:0005634 [nucleus]
GO:0005637 [nuclear inner membrane]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0034220 [ion transmembrane transport]
GO:0045444 [fat cell differentiation]
GO:0050966 [detection of mechanical stimulus involved in sensory perception of pain]
GO:0051260 [protein homooligomerization]
GO:0051291 [protein heterooligomerization]
Show all
343 aa
40.6 kDa
No 5
TMEM120A-215
ENSP00000480239
ENST00000493251
A0A087WWH9
[Direct mapping] Ion channel TACAN
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
99 aa
10.3 kDa
No 0

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