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S100A13
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  • S100A13
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:317.8 nTPM
FANTOM5:38.4 Scaled Tags Per Million
Pig:21.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019592Antibody CAB025494
Glial cells MediumMedium
Neuronal cells HighMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

317.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 317.8
Samples: 246

Max nTPM: 1164.3
Min nTPM: 36.2
Std nTPM: 165.6
Median nTPM: 278.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1164.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 966.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 862.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 835.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 739.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 704.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 702.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 686.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 684.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 683.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 673.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 649.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 648.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 622.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 604.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 603.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 590.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 587.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 583.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 582.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 573.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 571.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 560.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 556.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 544.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 538.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 534.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 534.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 530.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 529.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 529.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 518.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 516.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 515.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 500.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 496.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 493.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 488.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 486.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 481.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 476.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 468.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 465.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 463.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 458.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 454.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 452.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 438.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 434.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 428.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 425.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 425.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 421.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 418.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 416.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 408.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 407.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 405.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 404.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 390.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 386.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 382.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 379.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 377.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 376.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 374.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 371.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 369.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 369.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 368.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 367.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 356.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 352.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 351.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 351.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 350.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 350.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 348.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 343.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 341.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 338.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 338.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 332.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 331.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 328.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 327.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 327.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 326.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 322.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 321.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 320.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 319.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 317.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 312.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 311.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 309.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 309.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 309.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 309.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 309.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 308.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 304.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 303.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 302.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 300.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 299.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 299.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 298.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 298.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 296.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 295.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 295.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 295.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 295.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 293.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 293.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 292.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 290.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 289.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 287.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 280.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 279.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 279.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 277.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 276.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 275.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 275.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 275.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 275.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 274.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 269.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 268.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 265.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 264.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 264.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 264.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 260.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 258.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 255.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 255.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 255.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 255.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 255.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 255.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 252.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 252.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 252.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 248.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 247.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 246.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 243.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 241.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 241.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 239.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 237.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 237.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 236.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 235.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 235.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 234.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 232.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 230.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 230.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 228.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 227.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 227.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 223.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 221.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 221.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 218.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 218.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 218.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 213.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 211.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 211.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 210.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 209.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 209.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 205.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 204.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 203.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 202.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 201.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 199.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 198.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 197.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 196.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 194.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 192.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 191.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 191.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 190.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 190.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 190.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 188.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 187.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 184.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 183.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 180.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 180.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 178.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 177.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 176.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 174.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 173.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 173.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 173.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 171.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 169.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 168.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 164.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 164.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 163.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 163.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 159.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 159.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 158.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 156.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 154.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 150.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 149.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 148.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 148.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 147.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 146.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 145.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 143.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 143.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 141.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 137.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 137.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 133.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 131.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 128.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 128.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 127.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 125.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 124.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 124.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 123.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 119.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 119.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 112.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 106.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 36.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

38.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.4
FF:10164-103B2 76 years, female 38.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.2
Pig sample Sample description nTPM
Caudate
nTPM: 21.2
Samples: 4

Max nTPM: 24.5
Min nTPM: 16.2
Sample A Female 20.4
Sample B Female 24.5
Sample C Male 23.8
Sample D Male 16.2

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