HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:30.3 nTPM
HPA Brain:85.9 nTPM
GTEx:30.3 nTPM
FANTOM5:0.6 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:11.5 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045641Antibody HPA062711
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 85.9
Sample id Sample description nTPM
Hippocampus
nTPM: 85.8
1855 Male, age 76, left hemisphere 96.7
2148 Female, age 91, left hemisphere 91.1
2621 Female, age 67, right hemisphere 87.1
1898 Male, age 80, left hemisphere 84.5
1911 Female, age 85, right hemisphere 82.5
2529 Female, age 94, left hemisphere 72.8
Dentate gyrus
nTPM: 84.0
1927 Female, age 91, both hemispheres 90.2
2531 Female, age 67, both hemispheres 86.8
2246 Female, age 85, both hemispheres 84.1
2010 Male, age 76, both hemispheres 83.8
2530 Female, age 94, left hemisphere 80.4
2528 Male, age 74, both hemispheres 78.8
Entorhinal gyrus
nTPM: 76.5
2613 Female, age 94, left hemisphere 88.6
2764 Male, age 80, right hemisphere 79.5
1938 Female, age 85, left hemisphere 75.7
2686 Male, age 75, right hemisphere 75.3
1787 Male, age 76, left hemisphere 74.8
2117 Female, age 91, right hemisphere 64.9
Hippocampus, CA1
nTPM: 85.9
2749 Male, age 80, left hemisphere 94.5
1873 Female, age 85, both hemispheres 94.3
2082 Female, age 91, right hemisphere 85.7
2045 Male, age 76, both hemispheres 81.2
2527 Male, age 74, both hemispheres 73.7
Hippocampus, CA2
nTPM: 85.9
1963 Male, age 80, left hemisphere 108.5
1892 Male, age 76, both hemispheres 100.1
1940 Female, age 85, left hemisphere 83.8
2113 Female, age 91, right hemisphere 80.5
2437 Female, age 94, left hemisphere 76.2
2249 Male, age 74, both hemispheres 66.1
Hippocampus, CA3
nTPM: 84.6
2861 Female, age 67, both hemispheres 109.7
2137 Male, age 80, left hemisphere 89.1
2620 Female, age 94, left hemisphere 86.8
1867 Male, age 76, both hemispheres 80.0
1891 Female, age 85, both hemispheres 73.8
2436 Male, age 74, both hemispheres 68.5
Parahippocampal cortex
nTPM: 74.2
2622 Female, age 67, right hemisphere 81.2
1933 Female, age 85, both hemispheres 80.8
2693 Female, age 94, both hemispheres 76.0
2245 Female, age 91, both hemispheres 75.5
2532 Female, age 72, left hemisphere 75.1
1850 Male, age 80, both hemispheres 73.4
2250 Female, age 67, right hemisphere 72.8
2018 Male, age 76, both hemispheres 71.0
1990 Female, age 91, right hemisphere 69.2
2692 Male, age 74, both hemispheres 67.5
Perirhinal gyrus
nTPM: 77.1
2521 Female, age 94, right hemisphere 81.0
1841 Female, age 85, right hemisphere 78.3
1794 Male, age 80, right hemisphere 77.2
1847 Female, age 91, left hemisphere 76.3
2848 Male, age 76, right hemisphere 72.8
Subiculum
nTPM: 68.3
2729 Female, age 91, right hemisphere 79.7
1977 Female, age 85, both hemispheres 76.5
1901 Male, age 80, both hemispheres 66.4
2042 Male, age 76, both hemispheres 66.3
2619 Male, age 74, both hemispheres 65.6
2438 Female, age 94, left hemisphere 55.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 30.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.3
Samples: 197

Max nTPM: 50.8
Min nTPM: 6.7
Std nTPM: 8.3
Median nTPM: 29.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 50.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 50.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 50.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 49.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 49.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 49.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 45.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 44.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 0.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.6
FF:10169-103B7 60 years, female 1.0
FF:10153-102I9 76 years, female 0.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.2
Pig sample Sample description nTPM
Subiculum
nTPM: 21.7
Samples: 4

Max nTPM: 26.0
Min nTPM: 18.5
Sample A Female 26.0
Sample B Female 19.9
Sample C Male 22.4
Sample D Male 18.5
Dorsal hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 21.3
Min nTPM: 14.7
Sample A Female 21.3
Sample B Female 19.9
Sample C Male 17.8
Sample D Male 14.7
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 26.0
Min nTPM: 20.5
Sample A Female 23.8
Sample B Female 20.5
Sample C Male 26.0
Sample D Male 22.3
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 26.1
Min nTPM: 16.4
Sample A Female 18.2
Sample B Female 16.4
Sample C Male 26.1
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 11.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.1
Sample A Male 10.3
Sample B Male 11.1
Sample C Female 10.1
Sample D Female 14.4
Hippocampal formation
nTPM: 9.7
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.4
Sample A Male 8.4
Sample B Male 11.1
Sample C Female 10.5
Sample D Female 8.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69448722 Antisense, RP_050419_02_G10, Mouse strain C57BL/6J (56 days, male) 0.8
74881514 Antisense, RP_060315_04_C02, Mouse strain C57BL/6J (56 days, male) 0.7

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