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IL1RAP
HPA
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  • IL1RAP
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

IL1RAP
Synonyms C3orf13, IL-1RAcP, IL1R3
Gene descriptioni

Full gene name according to HGNC.

Interleukin 1 receptor accessory protein
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q28
Chromosome location (bp) 190514051 - 190659750
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000196083 (version 109)
Entrez gene 3556
HGNC HGNC:5995
UniProt Q9NPH3 (UniProt - Evidence at protein level)
neXtProt NX_Q9NPH3
GeneCards IL1RAP
Antibodypedia IL1RAP antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Coreceptor for IL1RL2 in the IL-36 signaling system (By similarity). Coreceptor with IL1R1 in the IL-1 signaling system. Associates with IL1R1 bound to IL1B to form the high affinity interleukin-1 receptor complex which mediates interleukin-1-dependent activation of NF-kappa-B and other pathways. Signaling involves the recruitment of adapter molecules such as TOLLIP, MYD88, and IRAK1 or IRAK2 via the respective TIR domains of the receptor/coreceptor subunits. Recruits TOLLIP to the signaling complex. Does not bind to interleukin-1 alone; binding of IL1RN to IL1R1, prevents its association with IL1R1 to form a signaling complex. The cellular response is modulated through a non-signaling association with the membrane IL1R2 decoy receptor. Coreceptor for IL1RL1 in the IL-33 signaling system. Can bidirectionally induce pre- and postsynaptic differentiation of neurons by trans-synaptically binding to PTPRD (By similarity). May play a role in IL1B-mediated costimulation of IFNG production from T-helper 1 (Th1) cells (Probable).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Immunity, Inflammatory response, Innate immunity
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

NAD
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a component of the interleukin 1 receptor complex, which initiates signalling events that result in the activation of interleukin 1-responsive genes. Alternative splicing of this gene results in membrane-bound and soluble isoforms differing in their C-terminus. The ratio of soluble to membrane-bound forms increases during acute-phase induction or stress. [provided by RefSeq, Jul 2018]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
IL1RAP-201
ENSP00000072516
ENST00000072516
Q9NPH3
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0004908 [interleukin-1 receptor activity]
GO:0005149 [interleukin-1 receptor binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0045087 [innate immune response]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
GO:0051965 [positive regulation of synapse assembly]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:0065003 [protein-containing complex assembly]
Show all
570 aa
65.4 kDa
Yes 1
IL1RAP-202
ENSP00000314807
ENST00000317757
Q9NPH3
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0004908 [interleukin-1 receptor activity]
GO:0005149 [interleukin-1 receptor binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0045087 [innate immune response]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
GO:0051965 [positive regulation of synapse assembly]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:0065003 [protein-containing complex assembly]
Show all
687 aa
78.6 kDa
Yes 1
IL1RAP-204
ENSP00000414102
ENST00000412080
H7C3W4
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004908 [interleukin-1 receptor activity]
GO:0019221 [cytokine-mediated signaling pathway]
Show all
193 aa
21.6 kDa
No 0
IL1RAP-206
ENSP00000409352
ENST00000422485
Q9NPH3
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0004908 [interleukin-1 receptor activity]
GO:0005149 [interleukin-1 receptor binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0045087 [innate immune response]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
GO:0051965 [positive regulation of synapse assembly]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:0065003 [protein-containing complex assembly]
Show all
356 aa
41 kDa
Yes 0
IL1RAP-207
ENSP00000389149
ENST00000422625
C9JT28
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
113 aa
13.5 kDa
Yes 0
IL1RAP-208
ENSP00000387371
ENST00000422940
Q9NPH3
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0004908 [interleukin-1 receptor activity]
GO:0005149 [interleukin-1 receptor binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0045087 [innate immune response]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
GO:0051965 [positive regulation of synapse assembly]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:0065003 [protein-containing complex assembly]
Show all
356 aa
41 kDa
Yes 0
IL1RAP-209
ENSP00000391899
ENST00000434491
C9J9W1
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004908 [interleukin-1 receptor activity]
GO:0019221 [cytokine-mediated signaling pathway]
Show all
215 aa
24.3 kDa
No 0
IL1RAP-210
ENSP00000401132
ENST00000439062
Q9NPH3
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0004908 [interleukin-1 receptor activity]
GO:0005149 [interleukin-1 receptor binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0045087 [innate immune response]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
GO:0051965 [positive regulation of synapse assembly]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:0065003 [protein-containing complex assembly]
Show all
570 aa
65.4 kDa
Yes 1
IL1RAP-211
ENSP00000390541
ENST00000447382
Q9NPH3
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002114 [interleukin-33 receptor activity]
GO:0002376 [immune system process]
GO:0003953 [NAD+ nucleosidase activity]
GO:0004908 [interleukin-1 receptor activity]
GO:0005149 [interleukin-1 receptor binding]
GO:0005576 [extracellular region]
GO:0005886 [plasma membrane]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016787 [hydrolase activity]
GO:0019221 [cytokine-mediated signaling pathway]
GO:0032736 [positive regulation of interleukin-13 production]
GO:0032753 [positive regulation of interleukin-4 production]
GO:0032754 [positive regulation of interleukin-5 production]
GO:0032755 [positive regulation of interleukin-6 production]
GO:0038172 [interleukin-33-mediated signaling pathway]
GO:0045087 [innate immune response]
GO:0045202 [synapse]
GO:0050135 [NAD(P)+ nucleosidase activity]
GO:0051092 [positive regulation of NF-kappaB transcription factor activity]
GO:0051965 [positive regulation of synapse assembly]
GO:0061809 [NAD+ nucleotidase, cyclic ADP-ribose generating]
GO:0065003 [protein-containing complex assembly]
GO:0098978 [glutamatergic synapse]
GO:0099151 [regulation of postsynaptic density assembly]
GO:0099545 [trans-synaptic signaling by trans-synaptic complex]
GO:0099560 [synaptic membrane adhesion]
GO:1905606 [regulation of presynapse assembly]
Show all
570 aa
65.4 kDa
Yes 1
IL1RAP-212
ENSP00000412008
ENST00000453359
C9J1D9
[Direct mapping] Interleukin-1 receptor accessory protein
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
145 aa
17.2 kDa
Yes 0

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