We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SPOCK3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SPOCK3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:74.0 nTPM
HPA Brain:148.3 nTPM
GTEx:74.0 nTPM
FANTOM5:361.4 Scaled Tags Per Million
Pig:106.5 nTPM
Mouse:395.3 nTPM
Allen mouse:16.5 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 89.5
2846 Female, age 79, unknown 116.2
2288 Male, age 75, left hemisphere 113.7
1854 Male, age 80, left hemisphere 102.0
1857 Female, age 85, left hemisphere 92.2
2290 Female, age 72, unknown 89.5
1781 Male, age 74, unknown 70.0
2481 Female, age 94, left hemisphere 68.0
2289 Male, age 61, right hemisphere 64.1
Globus pallidus, externus
nTPM: 123.5
1996 Male, age 80, right hemisphere 168.1
2772 Female, age 79, unknown 151.4
2395 Male, age 75, both hemispheres 124.5
2646 Male, age 61, right hemisphere 90.7
2567 Female, age 72, unknown 82.6
Globus pallidus, internus
nTPM: 148.3
2111 Female, age 85, right hemisphere 217.2
2287 Male, age 75, right hemisphere 191.0
2778 Female, age 91, both hemispheres 184.5
2037 Male, age 80, right hemisphere 130.2
1818 Male, age 74, unknown 128.4
2566 Female, age 72, unknown 105.7
2483 Female, age 94, right hemisphere 81.4
Nucleus accumbens
nTPM: 109.2
2391 Female, age 94, left hemisphere 157.6
2824 Male, age 61, right hemisphere 130.2
2698 Female, age 72, unknown 121.1
1806 Female, age 85, left hemisphere 102.7
2286 Male, age 75, left hemisphere 101.5
1856 Female, age 91, right hemisphere 93.3
1783 Male, age 74, unknown 91.3
2732 Male, age 80, right hemisphere 75.7
Nucleus basalis of Meynert
nTPM: 92.1
2393 Male, age 80, right hemisphere 107.9
2821 Male, age 75, both hemispheres 106.8
2484 Female, age 94, left hemisphere 81.8
2569 Male, age 61, both hemispheres 71.7
Nucleus of the diagonal band
nTPM: 37.8
1812 Female, age 91, both hemispheres 51.2
1979 Male, age 74, unknown 47.9
2029 Male, age 61, right hemisphere 35.1
2775 Male, age 80, right hemisphere 28.9
2195 Female, age 85, both hemispheres 26.0
Putamen
nTPM: 99.6
1829 Male, age 74, unknown 124.7
2466 Female, age 79, unknown 112.7
1937 Female, age 91, right hemisphere 111.1
1838 Male, age 80, right hemisphere 110.9
2482 Female, age 94, left hemisphere 95.9
2489 Female, age 72, unknown 75.0
2647 Male, age 75, left hemisphere 67.1
Septal nuclei
nTPM: 54.1
2394 Male, age 61, left hemisphere 107.8
2199 Male, age 80, right hemisphere 69.3
2629 Female, age 94, right hemisphere 53.3
2031 Female, age 72, unknown 43.2
2009 Female, age 91, both hemispheres 40.3
2059 Female, age 85, both hemispheres 36.0
1960 Male, age 74, unknown 29.0
Stria terminalis, bed nucleus
nTPM: 48.6
2201 Male, age 74, unknown 61.5
1974 Female, age 91, both hemispheres 45.4
2486 Female, age 94, both hemispheres 38.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.1
Samples: 246

Max nTPM: 211.6
Min nTPM: 13.3
Std nTPM: 28.8
Median nTPM: 57.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 211.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 167.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 161.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 158.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 156.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 145.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 139.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 136.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 128.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 111.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 111.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 110.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 109.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 108.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 108.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 108.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 106.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 105.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 104.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 104.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 103.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 101.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 97.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 97.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 96.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 95.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 94.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 94.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 93.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 93.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 93.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 93.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 90.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 90.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 89.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 89.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 89.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 88.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 87.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 87.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 86.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 85.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 85.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 84.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 83.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 83.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 82.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 81.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 80.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 80.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 80.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 79.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 79.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 78.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 78.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 77.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 77.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 76.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 76.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 76.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 76.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 76.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 74.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 74.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 73.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 73.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 72.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 72.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 71.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 71.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 70.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 70.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 70.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 68.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 68.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 68.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 68.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 68.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 67.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 67.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 66.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 65.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 65.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 65.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 64.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 63.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 62.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 62.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 62.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 62.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 62.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 60.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 60.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 59.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 59.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 59.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 58.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 58.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 57.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 57.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 57.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 57.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 56.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 56.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 56.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 55.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 55.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 55.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 55.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 55.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 54.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 54.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 54.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 54.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 53.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 53.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 53.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 53.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 51.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 51.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 50.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 50.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 50.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 50.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 50.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 50.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 50.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 49.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 49.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 48.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 48.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 47.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 47.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 46.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 45.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 44.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 44.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 44.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 43.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 43.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 42.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 42.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 42.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 42.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 42.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 42.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 42.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 41.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 41.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 41.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 41.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 40.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 39.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 39.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 39.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 38.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 38.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 37.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 36.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 36.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 35.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 34.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 34.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 33.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 33.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 33.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 32.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 32.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 32.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 32.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 31.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 30.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 30.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 30.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 29.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 29.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 29.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 28.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 28.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 28.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 27.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 26.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 25.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 25.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 25.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 23.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 22.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 52.3
Samples: 246

Max nTPM: 238.8
Min nTPM: 9.4
Std nTPM: 27.1
Median nTPM: 48.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 238.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 179.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 176.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 132.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 127.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 108.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 108.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 105.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 100.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 96.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 96.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 96.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 94.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 93.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 93.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 86.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 86.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 86.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 83.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 82.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 80.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 80.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 79.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 79.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 78.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 78.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 77.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 77.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 77.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 77.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 74.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 73.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 73.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 73.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 72.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 72.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 71.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 71.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 71.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 71.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 70.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 70.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 70.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 70.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 69.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 69.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 69.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 67.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 67.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 67.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 67.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 66.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 66.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 66.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 66.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 66.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 65.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 65.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 65.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 65.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 65.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 64.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 64.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 64.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 64.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 64.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 63.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 63.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 63.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 62.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 61.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 61.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 61.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 60.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 59.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 59.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 59.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 59.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 59.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 58.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 58.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 58.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 58.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 57.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 56.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 56.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 56.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 55.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 55.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 54.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 54.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 54.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 54.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 54.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 53.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 52.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 52.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 52.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 52.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 52.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 51.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 51.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 51.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 51.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 51.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 50.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 50.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 50.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 50.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 50.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 49.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 49.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 49.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 49.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 49.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 48.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 48.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 48.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 48.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 48.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 47.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 47.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 47.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 47.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 47.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 46.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 46.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 46.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 45.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 45.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 45.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 45.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 45.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 45.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 45.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 44.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 44.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 44.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 44.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 44.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 43.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 43.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 43.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 42.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 42.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 42.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 42.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 42.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 42.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 42.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 41.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 41.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 40.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 40.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 40.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 40.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 40.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 39.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 39.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 38.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 38.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 38.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 37.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 37.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 37.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 36.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 36.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 35.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 35.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 35.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 35.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 35.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 34.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 34.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 34.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 34.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 34.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 34.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 34.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 33.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 33.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 33.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 32.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 32.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 32.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 32.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 31.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 30.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 30.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 30.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 29.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 29.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 29.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 29.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 29.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 26.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 26.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 26.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 26.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 26.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 25.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 25.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 25.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 25.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 24.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 23.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 23.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 23.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 23.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 22.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 22.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 22.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 22.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 21.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 21.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 20.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 20.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 19.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 19.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 19.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 18.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 18.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 17.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 17.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 16.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 16.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 12.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 12.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 74.0
Samples: 205

Max nTPM: 223.0
Min nTPM: 17.3
Std nTPM: 31.6
Median nTPM: 68.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 223.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 186.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 166.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 164.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 158.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 150.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 147.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 146.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 136.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 135.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 135.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 134.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 125.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 124.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 123.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 117.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 113.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 113.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 111.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 111.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 111.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 109.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 107.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 107.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 107.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 105.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 102.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 102.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 101.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 101.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 101.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 100.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 100.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 100.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 100.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 100.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 99.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 97.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 97.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 97.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 97.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 95.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 95.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 94.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 93.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 93.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 92.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 92.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 92.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 92.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 92.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 91.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 90.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 89.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 89.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 89.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 88.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 88.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 87.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 87.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 86.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 86.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 86.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 86.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 85.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 85.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 83.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 83.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 82.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 82.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 81.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 80.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 80.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 79.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 79.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 78.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 77.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 77.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 77.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 75.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 74.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 73.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 73.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 73.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 73.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 72.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 72.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 71.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 71.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 71.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 70.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 70.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 70.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 70.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 69.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 69.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 69.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 69.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 67.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 67.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 66.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 65.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 65.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 64.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 64.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 64.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 64.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 64.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 64.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 63.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 63.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 63.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 63.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 63.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 63.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 62.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 62.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 61.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 61.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 61.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 60.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 60.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 59.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 59.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 58.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 58.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 58.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 57.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 56.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 55.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 55.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 55.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 54.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 54.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 53.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 52.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 52.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 52.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 51.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 50.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 50.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 48.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 48.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 48.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 48.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 46.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 46.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 46.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 44.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 44.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 43.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 42.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 42.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 42.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 42.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 42.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 41.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 41.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 41.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 41.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 40.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 40.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 40.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 40.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 38.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 38.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 38.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 37.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 36.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 36.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 35.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 34.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 34.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 34.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 32.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 28.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 27.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 26.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 24.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 21.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 21.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 17.3
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

361.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 134.5
FF:10164-103B2 76 years, female 134.5
Nucleus accumbens
Scaled Tags Per Million: 184.9
FF:10037-101F1 23-56 years, mixed 184.9
Putamen
Scaled Tags Per Million: 199.7
FF:10176-103C5 60 years, female 199.7
Globus pallidus
Scaled Tags Per Million: 361.4
FF:10175-103C4 60 years, female 436.3
FF:10161-103A8 76 years, female 286.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.5
Pig sample Sample description nTPM
Caudate
nTPM: 76.8
Samples: 4

Max nTPM: 98.0
Min nTPM: 56.5
Sample A Female 56.5
Sample B Female 66.7
Sample C Male 98.0
Sample D Male 86.0
Putamen
nTPM: 106.5
Samples: 4

Max nTPM: 192.2
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 99.2
Sample C Male 192.2
Sample D Male 101.8
Septum
nTPM: 46.8
Samples: 4

Max nTPM: 50.2
Min nTPM: 40.7
Sample A Female 50.2
Sample B Female 47.9
Sample C Male 48.3
Sample D Male 40.7
Ventral pallidum
nTPM: 51.3
Samples: 4

Max nTPM: 68.9
Min nTPM: 41.9
Sample A Female 68.9
Sample B Female 41.9
Sample C Male 44.2
Sample D Male 50.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

395.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 395.3
Samples: 4

Max nTPM: 449.5
Min nTPM: 333.3
Sample A Male 449.5
Sample B Male 433.1
Sample C Female 333.3
Sample D Female 365.2
Septum
nTPM: 136.0
Samples: 4

Max nTPM: 155.8
Min nTPM: 113.3
Sample A Male 113.3
Sample B Male 145.8
Sample C Female 128.9
Sample D Female 155.8
Ventral forebrain
nTPM: 151.4
Samples: 4

Max nTPM: 155.1
Min nTPM: 146.3
Sample A Male 153.1
Sample B Male 155.1
Sample C Female 151.1
Sample D Female 146.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.5
583547 Antisense, RP_040831_02_G04, Mouse strain C57BL/6J (56 days, male) 19.2
70634298 Antisense, RP_050725_01_F03, Mouse strain C57BL/6J (56 days, male) 13.9
Pallidum
Expression energy: 7.3
583547 Antisense, RP_040831_02_G04, Mouse strain C57BL/6J (56 days, male) 10.0
70634298 Antisense, RP_050725_01_F03, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org