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MATCAP1
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TISSUE PRIMARY DATA CEREBELLUM Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Cerebellum
Tissue proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cells in granular layer: Low
Cells in molecular layer: Not detected
Purkinje cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:82.9 nTPM
HPA Brain:36.6 nTPM
GTEx:82.9 nTPM
FANTOM5:108.4 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:7.2 nTPM
Allen mouse:0.2 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA065996
Purkinje cells Low
Cells in granular layer Low
Cells in molecular layer Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 32.0
1788 Male, age 55, unknown 44.0
1769 Male, age 76, right hemisphere 36.3
1768 Female, age 72, unknown 35.2
1774 Male, age 80, left hemisphere 32.8
2006 Male, age 61, right hemisphere 30.5
2055 Female, age 91, right hemisphere 29.5
2101 Male, age 74, right hemisphere 27.8
2003 Female, age 85, right hemisphere 19.7
Cerebellar nuclei
nTPM: 15.3
2318 Male, age 74, left hemisphere 22.7
2882 Male, age 76, left hemisphere 18.7
2005 Male, age 80, left hemisphere 15.8
1966 Female, age 91, left hemisphere 15.6
2177 Female, age 85, both hemispheres 14.4
1879 Male, age 55, unknown 13.5
1871 Male, age 74, unknown 12.9
2175 Male, age 61, right hemisphere 12.6
2783 Female, age 72, unknown 11.3
Flocculonodular lobe
nTPM: 36.2
1792 Male, age 74, unknown 45.8
2004 Male, age 61, right hemisphere 38.6
1767 Male, age 76, left hemisphere 35.6
1771 Male, age 80, left hemisphere 34.8
1765 Male, age 55, unknown 33.2
1835 Female, age 85, right hemisphere 33.0
2176 Female, age 91, right hemisphere 32.5
Vermis
nTPM: 36.6
1825 Male, age 74, unknown 45.4
2460 Male, age 61, both hemispheres 43.7
1770 Male, age 76, left hemisphere 37.7
1778 Female, age 91, left hemisphere 36.3
1988 Female, age 85, left hemisphere 36.1
1928 Female, age 72, unknown 36.0
1766 Male, age 55, unknown 32.4
2834 Male, age 80, left hemisphere 32.4
1751 Male, age 74, right hemisphere 29.4

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

82.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 73.4
Samples: 215

Max nTPM: 148.5
Min nTPM: 24.4
Std nTPM: 20.4
Median nTPM: 71.2
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 148.5
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 145.1
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 137.3
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 127.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 122.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 121.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 118.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 117.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 116.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 113.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 112.3
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 111.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 108.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 105.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 104.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 103.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 102.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 101.6
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 99.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 99.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 99.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 99.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 99.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 98.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 97.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 97.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 97.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 96.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 96.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 95.6
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 95.6
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 95.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 94.7
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 94.1
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 92.3
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 92.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 91.7
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 90.6
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 89.6
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 89.0
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 88.7
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 88.5
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 88.2
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 87.9
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 87.8
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 87.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 87.4
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 86.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 86.0
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 85.7
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 85.7
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 85.5
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 85.2
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 84.7
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 84.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 83.6
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 83.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 83.0
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 82.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 82.0
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 81.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 81.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 80.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 80.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 80.2
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 80.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 80.1
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 79.4
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 79.2
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 78.8
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 78.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 78.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 78.7
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 78.4
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 78.2
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 77.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 77.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 77.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 77.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 77.0
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 76.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 76.3
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 76.3
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 75.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 75.5
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 75.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 75.4
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 75.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 75.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 74.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 74.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 74.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 74.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 73.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 73.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 73.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 73.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 73.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 73.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 72.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 72.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 72.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 72.3
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 72.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 71.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 71.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 71.3
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 71.2
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 71.2
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 71.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 71.1
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 70.9
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 70.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 70.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 70.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 70.1
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 70.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 69.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 69.8
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 69.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 69.7
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 69.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 69.4
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 69.3
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 69.3
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 69.3
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 69.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 68.8
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 68.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 68.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 67.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 67.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 67.6
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 67.5
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 67.4
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 67.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 66.1
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 65.5
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 64.6
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 64.2
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 64.1
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 63.7
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 63.6
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 63.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 63.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 63.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 63.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 62.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 62.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 62.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 62.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 62.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 61.7
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 61.4
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 61.1
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 61.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 61.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 60.8
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 60.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 60.2
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 59.7
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 59.2
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 58.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 58.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 57.3
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 57.2
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 57.0
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 56.8
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 56.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 56.5
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 56.1
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 56.0
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 55.3
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 55.1
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 55.0
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 55.0
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 54.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 54.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 54.1
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 53.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 53.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 53.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 52.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 52.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 52.6
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 52.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 51.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 51.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 51.3
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 51.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 49.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 49.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 49.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 48.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 47.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 47.5
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 46.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 46.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 45.8
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 45.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 45.6
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 45.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 45.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 44.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 44.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 43.8
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 42.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 42.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 42.0
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 41.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 39.9
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 39.1
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 38.7
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 36.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 24.4
Show allShow less
Brain - Cerebellum
Average nTPM: 82.9
Samples: 241

Max nTPM: 163.0
Min nTPM: 27.0
Std nTPM: 21.7
Median nTPM: 83.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 163.0
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 156.3
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 136.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 134.9
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 131.8
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 130.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 128.4
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 128.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 127.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 123.0
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 122.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 121.8
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 120.3
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 120.0
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 119.7
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 116.7
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 116.2
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 112.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 111.9
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 111.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 110.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 109.2
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 108.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 107.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 107.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 105.3
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 104.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 104.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 104.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 103.8
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 103.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 103.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 103.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 102.9
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 102.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 101.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 101.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 101.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 101.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 101.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 101.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 101.1
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 100.9
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 100.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 100.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 100.4
GTEX-14E6D-2926-SM-664OP 50-59 years, male 100.2
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 100.1
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 99.4
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 99.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 99.1
GTEX-13112-2926-SM-5DUWT 50-59 years, male 98.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 98.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 98.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 97.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 97.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 97.6
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 97.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 96.9
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 96.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 95.5
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 95.0
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 94.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 94.5
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 94.5
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 94.4
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 94.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 94.0
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 94.0
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 94.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 93.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 93.5
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 93.3
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 92.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 92.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 92.8
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 92.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 92.2
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 92.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 91.9
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 91.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 91.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 90.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 90.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 90.6
GTEX-11NUK-3026-SM-5986K 50-59 years, male 90.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 90.4
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 90.3
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 89.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 89.1
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 89.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 88.8
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 88.4
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 88.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 88.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 88.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 88.0
GTEX-14ABY-3026-SM-664NE 50-59 years, male 87.8
GTEX-18465-2926-SM-7KFSE 50-59 years, male 87.8
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 87.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 87.7
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 87.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 87.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 87.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 87.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 86.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 86.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 86.5
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 86.3
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 85.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 85.3
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 85.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 85.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 85.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 84.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 84.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 84.1
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 84.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 83.7
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 83.5
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 83.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 83.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 83.4
GTEX-11ONC-3026-SM-5985W 60-69 years, male 83.4
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 83.4
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 83.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 83.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 82.6
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 82.4
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 81.9
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 81.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 81.0
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 81.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 80.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 80.4
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 80.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 79.5
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 79.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 79.2
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 79.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 78.9
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 78.7
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 78.7
GTEX-145LS-3026-SM-5O99S 60-69 years, female 78.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 78.2
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 78.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 77.7
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 77.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 76.8
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 76.8
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 76.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 76.0
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 75.7
GTEX-1192X-3226-SM-5987D 50-59 years, male 75.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 75.4
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 74.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 74.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 74.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 73.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 73.3
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 73.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 72.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 72.1
GTEX-144GL-2926-SM-5O99F 50-59 years, male 71.8
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 71.7
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 71.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 71.2
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 71.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 71.1
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 71.0
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 70.8
GTEX-X261-3126-SM-4PQZC 50-59 years, male 70.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 70.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 69.9
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 69.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 69.8
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 69.4
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 69.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 68.7
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 68.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 68.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 68.4
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 68.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 67.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 67.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 67.6
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 67.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 66.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 66.8
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 66.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 66.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 65.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 65.6
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 65.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 64.9
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 64.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 64.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 63.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 63.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 63.3
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 63.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 63.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 62.6
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 62.0
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 60.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 60.6
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 60.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 59.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 59.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 58.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 57.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 57.4
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 55.1
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 54.9
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 53.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 53.0
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 52.9
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 52.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 52.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 51.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 51.1
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 50.8
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 50.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 50.2
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 50.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 49.1
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 48.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 48.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 47.8
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 47.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 46.4
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 45.8
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 45.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 43.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 41.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 41.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 41.5
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 41.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 39.2
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 36.0
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 27.0
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

108.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 108.4
FF:10083-102B2 22-68 years, mixed 121.2
FF:10166-103B4 76 years, female 95.5

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.8
Pig sample Sample description nTPM
Cerebellum
nTPM: 13.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.4
Sample A Female 15.2
Sample B Female 12.4
Sample C Male 13.2
Sample D Male 14.3

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

7.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 7.2
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.7
Sample A Male 6.7
Sample B Male 6.9
Sample C Female 8.2
Sample D Female 6.9

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.2
68845251 Antisense, RP_050224_01_D08, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org