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AKR1C3
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:263.4 nTPM
HPA:263.4 nTPM
GTEx:219.3 nTPM
FANTOM5:346.0 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068265Antibody CAB010874
Glandular cells HighHigh





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

263.4
overview
Male, age 65
Small intestine sample 232
nTPM: 285.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 352.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 202.7
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 212.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

219.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 219.3
Samples: 187

Max nTPM: 1051.5
Min nTPM: 4.7
Std nTPM: 222.4
Median nTPM: 140.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1051.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 888.5
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 831.2
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 769.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 743.6
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 724.5
GTEX-111YS-1426-SM-5GID8 60-69 years, male 713.4
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 674.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 654.1
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 639.8
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 637.6
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 632.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 616.7
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 606.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 600.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 597.4
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 583.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 575.3
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 570.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 568.9
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 523.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 520.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 516.1
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 512.0
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 511.0
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 508.7
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 507.0
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 494.5
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 489.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 469.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 466.7
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 451.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 444.6
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 443.3
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 441.7
GTEX-14PN3-2026-SM-68729 60-69 years, female 436.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 429.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 427.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 416.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 410.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 402.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 400.1
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 362.7
GTEX-ZTSS-0926-SM-59865 40-49 years, male 355.2
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 351.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 351.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 347.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 340.8
GTEX-14PKU-1626-SM-6871C 40-49 years, female 338.0
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 335.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 335.6
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 332.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 330.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 330.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 327.1
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 301.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 299.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 295.1
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 294.2
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 290.5
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 289.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 288.6
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 280.9
GTEX-13O61-1326-SM-5KM31 60-69 years, male 280.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 268.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 263.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 262.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 256.9
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 250.0
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 245.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 240.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 235.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 234.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 232.6
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 229.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 211.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 210.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 208.2
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 179.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 177.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 171.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 164.7
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 161.8
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 160.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 157.1
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 156.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 155.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 155.9
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 152.9
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 152.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 147.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 145.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 144.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 140.3
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 138.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 138.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 134.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 131.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 130.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 126.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 116.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 115.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 112.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 110.6
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 106.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 106.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 97.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 96.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 90.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 87.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 87.4
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 86.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 82.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 81.1
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 72.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 67.9
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 64.5
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 60.5
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 58.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 56.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 56.3
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 53.8
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 52.0
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 51.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 46.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 45.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 44.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 43.5
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 40.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 39.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 35.8
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 35.7
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 35.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 35.5
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 35.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 34.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 34.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 32.3
GTEX-1192X-2526-SM-59868 50-59 years, male 32.0
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 30.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 30.2
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 29.8
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 29.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 26.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 26.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 25.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 25.4
GTEX-13111-1426-SM-5DUW3 50-59 years, male 23.8
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 21.9
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 21.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 21.6
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 21.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 20.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 20.7
GTEX-117YX-0326-SM-5GICL 50-59 years, male 19.9
GTEX-183FY-1626-SM-793D8 20-29 years, male 19.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 19.5
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 18.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 18.5
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 17.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 17.8
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 17.8
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 16.3
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 16.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 15.9
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 15.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 14.9
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 14.7
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 14.7
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 14.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 14.3
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 14.0
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 13.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 13.6
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 13.0
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 12.5
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 12.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 11.2
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 10.9
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 10.6
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 8.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 8.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 8.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 8.0
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 6.6
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 5.9
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 4.7
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

346.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 346.0
FF:10024-101D6 15,40,85 years, mixed 346.0

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