HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:38.3 nTPM
GTEx:10.1 nTPM
FANTOM5:60.3 Scaled Tags Per Million
Pig:6.4 nTPM
Mouse:32.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041021
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.5
2529 Female, age 94, left hemisphere 33.2
2621 Female, age 67, right hemisphere 28.8
1898 Male, age 80, left hemisphere 27.6
1855 Male, age 76, left hemisphere 25.9
1911 Female, age 85, right hemisphere 25.3
2148 Female, age 91, left hemisphere 23.9
Dentate gyrus
nTPM: 26.2
1927 Female, age 91, both hemispheres 31.9
2246 Female, age 85, both hemispheres 28.3
2528 Male, age 74, both hemispheres 26.1
2530 Female, age 94, left hemisphere 24.7
2010 Male, age 76, both hemispheres 23.6
2531 Female, age 67, both hemispheres 22.8
Entorhinal gyrus
nTPM: 30.5
1938 Female, age 85, left hemisphere 34.9
1787 Male, age 76, left hemisphere 34.8
2686 Male, age 75, right hemisphere 30.7
2613 Female, age 94, left hemisphere 29.4
2764 Male, age 80, right hemisphere 28.8
2117 Female, age 91, right hemisphere 24.5
Hippocampus, CA1
nTPM: 24.7
2527 Male, age 74, both hemispheres 30.3
1873 Female, age 85, both hemispheres 26.9
2749 Male, age 80, left hemisphere 25.1
2082 Female, age 91, right hemisphere 22.1
2045 Male, age 76, both hemispheres 19.1
Hippocampus, CA2
nTPM: 28.9
1892 Male, age 76, both hemispheres 35.8
1940 Female, age 85, left hemisphere 33.7
1963 Male, age 80, left hemisphere 27.9
2437 Female, age 94, left hemisphere 27.5
2113 Female, age 91, right hemisphere 24.6
2249 Male, age 74, both hemispheres 24.1
Hippocampus, CA3
nTPM: 25.9
1891 Female, age 85, both hemispheres 28.5
2620 Female, age 94, left hemisphere 27.9
2436 Male, age 74, both hemispheres 26.0
2137 Male, age 80, left hemisphere 25.3
1867 Male, age 76, both hemispheres 25.0
2861 Female, age 67, both hemispheres 22.9
Parahippocampal cortex
nTPM: 33.2
1850 Male, age 80, both hemispheres 41.6
2532 Female, age 72, left hemisphere 36.8
1990 Female, age 91, right hemisphere 36.1
2693 Female, age 94, both hemispheres 35.3
1933 Female, age 85, both hemispheres 33.3
2692 Male, age 74, both hemispheres 32.2
2250 Female, age 67, right hemisphere 31.4
2622 Female, age 67, right hemisphere 30.9
2245 Female, age 91, both hemispheres 29.9
2018 Male, age 76, both hemispheres 24.5
Perirhinal gyrus
nTPM: 38.3
1841 Female, age 85, right hemisphere 43.0
1794 Male, age 80, right hemisphere 39.7
1847 Female, age 91, left hemisphere 37.9
2521 Female, age 94, right hemisphere 37.5
2848 Male, age 76, right hemisphere 33.6
Subiculum
nTPM: 28.2
2438 Female, age 94, left hemisphere 33.4
1901 Male, age 80, both hemispheres 30.9
1977 Female, age 85, both hemispheres 29.7
2619 Male, age 74, both hemispheres 28.8
2729 Female, age 91, right hemisphere 23.8
2042 Male, age 76, both hemispheres 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 24.4
Min nTPM: 4.1
Std nTPM: 3.0
Median nTPM: 9.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 21.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 21.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 21.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 19.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 17.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 17.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 16.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 15.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 15.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 15.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.3
FF:10153-102I9 76 years, female 63.6
FF:10169-103B7 60 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.4
Pig sample Sample description nTPM
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 7.5
Min nTPM: 5.1
Sample A Female 7.5
Sample B Female 6.0
Sample C Male 7.0
Sample D Male 5.1
Dorsal hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.7
Sample A Female 5.1
Sample B Female 6.8
Sample C Male 4.7
Sample D Male 4.8
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 5.7
Sample C Male 6.6
Sample D Male 5.5
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 5.8
Sample C Male 7.6
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.1
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.4
Sample A Male 30.8
Sample B Male 32.6
Sample C Female 28.4
Sample D Female 36.4
Hippocampal formation
nTPM: 25.6
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.5
Sample A Male 27.2
Sample B Male 27.5
Sample C Female 24.3
Sample D Female 23.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73767139 Antisense, RP_051212_02_A06, Mouse strain C57BL/6J (56 days, male) 0.0

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