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ELAVL3
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  • ELAVL3
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.1 nTPM
HPA Brain:151.1 nTPM
GTEx:44.1 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Pig:90.2 nTPM
Mouse:67.4 nTPM
Allen mouse:3.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB013066
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 114.6
2288 Male, age 75, left hemisphere 147.1
1781 Male, age 74, unknown 125.7
2846 Female, age 79, unknown 121.6
2289 Male, age 61, right hemisphere 119.8
2290 Female, age 72, unknown 114.3
1857 Female, age 85, left hemisphere 110.6
1854 Male, age 80, left hemisphere 93.6
2481 Female, age 94, left hemisphere 83.9
Globus pallidus, externus
nTPM: 143.4
2646 Male, age 61, right hemisphere 168.8
2772 Female, age 79, unknown 153.2
1996 Male, age 80, right hemisphere 141.0
2567 Female, age 72, unknown 133.4
2395 Male, age 75, both hemispheres 120.7
Globus pallidus, internus
nTPM: 151.1
2287 Male, age 75, right hemisphere 199.0
2111 Female, age 85, right hemisphere 182.5
2778 Female, age 91, both hemispheres 181.0
2566 Female, age 72, unknown 144.5
1818 Male, age 74, unknown 140.5
2037 Male, age 80, right hemisphere 118.9
2483 Female, age 94, right hemisphere 91.5
Nucleus accumbens
nTPM: 118.5
2698 Female, age 72, unknown 130.7
2286 Male, age 75, left hemisphere 129.5
2391 Female, age 94, left hemisphere 126.5
1806 Female, age 85, left hemisphere 119.5
2824 Male, age 61, right hemisphere 118.2
1783 Male, age 74, unknown 115.0
1856 Female, age 91, right hemisphere 105.6
2732 Male, age 80, right hemisphere 103.3
Nucleus basalis of Meynert
nTPM: 115.5
2569 Male, age 61, both hemispheres 140.9
2821 Male, age 75, both hemispheres 126.5
2484 Female, age 94, left hemisphere 107.1
2393 Male, age 80, right hemisphere 87.3
Nucleus of the diagonal band
nTPM: 123.6
2029 Male, age 61, right hemisphere 139.5
2195 Female, age 85, both hemispheres 131.5
2775 Male, age 80, right hemisphere 120.1
1812 Female, age 91, both hemispheres 116.3
1979 Male, age 74, unknown 110.6
Putamen
nTPM: 112.7
2647 Male, age 75, left hemisphere 132.8
1829 Male, age 74, unknown 126.6
2489 Female, age 72, unknown 115.8
2466 Female, age 79, unknown 112.4
1937 Female, age 91, right hemisphere 112.0
2482 Female, age 94, left hemisphere 102.7
1838 Male, age 80, right hemisphere 86.7
Septal nuclei
nTPM: 119.1
2629 Female, age 94, right hemisphere 137.7
1960 Male, age 74, unknown 136.9
2394 Male, age 61, left hemisphere 127.0
2059 Female, age 85, both hemispheres 118.9
2031 Female, age 72, unknown 114.6
2009 Female, age 91, both hemispheres 99.8
2199 Male, age 80, right hemisphere 98.8
Stria terminalis, bed nucleus
nTPM: 123.1
2486 Female, age 94, both hemispheres 129.7
1974 Female, age 91, both hemispheres 125.7
2201 Male, age 74, unknown 113.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.6
Samples: 246

Max nTPM: 73.1
Min nTPM: 17.7
Std nTPM: 9.8
Median nTPM: 41.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 73.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 65.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 63.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 62.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 62.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 61.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 61.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 59.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 59.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 59.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 57.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 56.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 56.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 56.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 55.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 55.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 55.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 54.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 54.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 54.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 54.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 53.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 53.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 53.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 53.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 52.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 52.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 52.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 51.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 51.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 51.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 51.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 50.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 50.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 50.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 50.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 49.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 49.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 49.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 49.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 48.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 48.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 48.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 48.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 48.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 48.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 48.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 48.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 48.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 48.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 48.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 47.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 47.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 47.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 47.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 47.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 46.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 46.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 46.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 46.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 46.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 46.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 46.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 45.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 45.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 45.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 45.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 45.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 45.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 45.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 45.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 45.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 45.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 44.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 44.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 44.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 44.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 44.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 44.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 44.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 44.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 43.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 43.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 43.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 43.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 43.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 42.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 42.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 42.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 42.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 42.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 42.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 42.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 42.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 41.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 41.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 41.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 41.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 41.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 41.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 41.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 40.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 40.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 40.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 40.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 40.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 40.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 40.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 40.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 40.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 39.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 39.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 39.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 39.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 39.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 39.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 39.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 39.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 38.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 38.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 38.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 38.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 38.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 38.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 38.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 38.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 38.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 38.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 38.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 37.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 37.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 37.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 37.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 37.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 37.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 37.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 37.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 37.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 37.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 37.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 36.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 36.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 36.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 36.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 36.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 35.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 35.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 35.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 35.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 35.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 34.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 34.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 34.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 34.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 33.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 33.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 33.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 33.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 33.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 32.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 32.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 32.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 32.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 32.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 32.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 31.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 31.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 30.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 30.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 30.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 30.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 30.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 30.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 29.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 28.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 28.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 28.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 28.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 28.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 28.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 27.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 27.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 27.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 27.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 27.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 27.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 26.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 26.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 26.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 26.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 24.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 23.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 22.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 22.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 22.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 22.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 21.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 19.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 17.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 17.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 42.5
Samples: 246

Max nTPM: 70.2
Min nTPM: 14.1
Std nTPM: 9.7
Median nTPM: 43.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 70.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 68.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 62.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 61.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 60.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 60.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 59.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 59.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 58.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 57.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 57.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 57.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 56.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 56.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 55.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 55.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 55.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 54.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 54.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 53.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 53.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 53.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 53.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 53.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 53.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 53.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 53.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 52.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 52.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 52.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 52.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 52.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 51.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 51.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 51.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 51.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 51.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 51.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 50.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 50.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 50.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 50.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 50.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 50.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 50.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 50.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 49.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 49.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 49.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 49.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 49.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 49.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 49.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 49.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 48.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 48.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 48.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 48.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 48.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 48.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 48.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 48.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 48.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 48.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 47.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 47.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 47.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 47.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 47.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 47.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 47.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 46.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 46.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 46.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 46.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 46.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 46.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 46.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 46.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 46.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 46.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 46.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 46.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 46.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 46.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 45.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 45.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 45.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 45.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 45.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 45.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 44.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 44.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 44.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 44.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 44.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 44.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 44.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 44.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 44.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 44.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 43.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 43.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 43.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 43.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 43.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 43.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 43.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 43.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 43.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 43.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 43.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 43.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 43.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 42.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 42.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 42.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 42.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 42.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 42.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 42.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 42.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 41.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 41.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 41.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 41.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 41.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 41.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 41.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 40.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 40.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 40.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 40.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 40.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 40.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 40.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 40.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 39.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 39.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 39.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 39.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 39.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 39.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 39.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 39.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 39.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 39.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 39.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 38.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 38.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 38.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 38.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 38.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 38.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 38.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 38.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 37.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 37.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 37.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 37.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 37.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 37.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 37.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 36.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 36.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 36.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 35.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 35.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 35.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 35.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 35.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 35.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 35.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 35.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 34.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 33.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 33.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 33.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 32.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 32.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 32.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 32.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 32.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 32.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 32.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 32.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 31.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 31.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 30.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 30.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 30.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 29.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 29.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 29.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 29.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 28.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 28.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 27.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 27.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 27.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 26.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 26.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 25.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 25.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 25.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 25.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 24.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 24.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 24.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 23.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 21.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 20.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 20.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 19.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 19.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 18.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 17.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 14.1
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Brain - Putamen (basal ganglia)
Average nTPM: 44.1
Samples: 205

Max nTPM: 86.0
Min nTPM: 19.4
Std nTPM: 9.3
Median nTPM: 44.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 86.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 67.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 67.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 63.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 62.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 61.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 61.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 60.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 58.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 58.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 57.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 57.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 57.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 56.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 56.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 56.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 56.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 55.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 55.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 54.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 53.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 53.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 52.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 52.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 51.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 51.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 51.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 51.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 50.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 50.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 50.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 50.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 50.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 50.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 50.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 50.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 49.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 49.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 49.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 49.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 49.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 49.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 49.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 49.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 49.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 48.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 48.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 48.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 48.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 47.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 47.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 47.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 47.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 47.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 47.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 47.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 46.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 46.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 46.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 46.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 46.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 46.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 46.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 46.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 46.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 46.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 46.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 46.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 46.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 46.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 45.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 45.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 45.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 45.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 44.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 44.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 44.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 44.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 44.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 44.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 44.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 44.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 44.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 44.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 43.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 43.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 43.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 43.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 42.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 42.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 42.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 42.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 42.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 42.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 42.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 42.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 41.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 41.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 41.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 41.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 41.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 41.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 41.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 41.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 41.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 41.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 41.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 40.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 40.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 40.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 40.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 40.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 40.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 40.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 40.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 40.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 39.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 39.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 39.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 39.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 39.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 39.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 39.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 39.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 39.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 38.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 38.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 38.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 38.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 38.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 37.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 37.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 37.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 36.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 36.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 36.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 35.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 35.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 35.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 35.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 35.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 34.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 34.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 34.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 34.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 34.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 33.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 33.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 33.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 33.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 32.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 32.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 31.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 31.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 31.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 31.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 30.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 30.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 30.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 29.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 29.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 28.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 28.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 28.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 27.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 26.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 25.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 25.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 23.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 23.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 22.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 15.1
FF:10164-103B2 76 years, female 15.1
Nucleus accumbens
Scaled Tags Per Million: 23.6
FF:10037-101F1 23-56 years, mixed 23.6
Putamen
Scaled Tags Per Million: 19.2
FF:10176-103C5 60 years, female 19.2
Globus pallidus
Scaled Tags Per Million: 20.8
FF:10175-103C4 60 years, female 21.9
FF:10161-103A8 76 years, female 19.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.2
Pig sample Sample description nTPM
Caudate
nTPM: 73.3
Samples: 4

Max nTPM: 80.7
Min nTPM: 64.3
Sample A Female 64.3
Sample B Female 77.0
Sample C Male 80.7
Sample D Male 71.3
Putamen
nTPM: 88.2
Samples: 4

Max nTPM: 102.9
Min nTPM: 66.0
Sample A Female 98.3
Sample B Female 66.0
Sample C Male 85.7
Sample D Male 102.9
Septum
nTPM: 78.4
Samples: 4

Max nTPM: 86.2
Min nTPM: 70.3
Sample A Female 81.5
Sample B Female 70.3
Sample C Male 86.2
Sample D Male 75.5
Ventral pallidum
nTPM: 90.2
Samples: 4

Max nTPM: 119.9
Min nTPM: 65.1
Sample A Female 65.1
Sample B Female 78.5
Sample C Male 119.9
Sample D Male 97.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 67.4
Samples: 4

Max nTPM: 75.5
Min nTPM: 64.3
Sample A Male 65.1
Sample B Male 64.5
Sample C Female 75.5
Sample D Female 64.3
Septum
nTPM: 48.3
Samples: 4

Max nTPM: 60.4
Min nTPM: 38.8
Sample A Male 52.7
Sample B Male 38.8
Sample C Female 41.3
Sample D Female 60.4
Ventral forebrain
nTPM: 61.1
Samples: 4

Max nTPM: 69.1
Min nTPM: 51.5
Sample A Male 69.1
Sample B Male 57.3
Sample C Female 51.5
Sample D Female 66.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.2
74359628 Antisense, RP_060207_01_B08, Mouse strain C57BL/6J (56 days, male) 6.3
74635590 Antisense, RP_060215_04_A09, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 3.7
74359628 Antisense, RP_060207_01_B08, Mouse strain C57BL/6J (56 days, male) 7.4
74635590 Antisense, RP_060215_04_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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