We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
XRCC6
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • XRCC6
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:99.4 nTPM
HPA Brain:89.5 nTPM
GTEx:99.4 nTPM
FANTOM5:188.6 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:17.9 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047549Antibody HPA062226Antibody CAB004254
Glial cells HighLowHigh
Neuronal cells HighMediumHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

89.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 80.3
2481 Female, age 94, left hemisphere 101.6
2846 Female, age 79, unknown 84.8
1854 Male, age 80, left hemisphere 81.1
1857 Female, age 85, left hemisphere 81.1
2288 Male, age 75, left hemisphere 80.8
2290 Female, age 72, unknown 77.7
1781 Male, age 74, unknown 76.8
2289 Male, age 61, right hemisphere 58.3
Globus pallidus, externus
nTPM: 75.5
2772 Female, age 79, unknown 96.3
2395 Male, age 75, both hemispheres 88.4
1996 Male, age 80, right hemisphere 87.9
2646 Male, age 61, right hemisphere 60.5
2567 Female, age 72, unknown 44.2
Globus pallidus, internus
nTPM: 76.8
2287 Male, age 75, right hemisphere 97.8
2483 Female, age 94, right hemisphere 91.0
2778 Female, age 91, both hemispheres 88.2
2037 Male, age 80, right hemisphere 72.6
1818 Male, age 74, unknown 71.5
2111 Female, age 85, right hemisphere 63.2
2566 Female, age 72, unknown 53.5
Nucleus accumbens
nTPM: 83.9
1856 Female, age 91, right hemisphere 95.2
2286 Male, age 75, left hemisphere 91.1
2391 Female, age 94, left hemisphere 89.8
2698 Female, age 72, unknown 85.2
1783 Male, age 74, unknown 83.3
1806 Female, age 85, left hemisphere 81.3
2824 Male, age 61, right hemisphere 80.9
2732 Male, age 80, right hemisphere 64.6
Nucleus basalis of Meynert
nTPM: 71.0
2821 Male, age 75, both hemispheres 78.9
2393 Male, age 80, right hemisphere 75.0
2484 Female, age 94, left hemisphere 69.1
2569 Male, age 61, both hemispheres 61.0
Nucleus of the diagonal band
nTPM: 89.5
1812 Female, age 91, both hemispheres 106.6
2775 Male, age 80, right hemisphere 99.1
2195 Female, age 85, both hemispheres 86.7
2029 Male, age 61, right hemisphere 80.3
1979 Male, age 74, unknown 75.0
Putamen
nTPM: 75.6
2482 Female, age 94, left hemisphere 97.3
2466 Female, age 79, unknown 87.0
1937 Female, age 91, right hemisphere 82.9
1838 Male, age 80, right hemisphere 79.4
1829 Male, age 74, unknown 73.7
2647 Male, age 75, left hemisphere 55.8
2489 Female, age 72, unknown 52.9
Septal nuclei
nTPM: 82.8
2031 Female, age 72, unknown 111.4
1960 Male, age 74, unknown 99.2
2009 Female, age 91, both hemispheres 89.1
2629 Female, age 94, right hemisphere 81.7
2059 Female, age 85, both hemispheres 70.0
2199 Male, age 80, right hemisphere 67.6
2394 Male, age 61, left hemisphere 60.8
Stria terminalis, bed nucleus
nTPM: 81.0
1974 Female, age 91, both hemispheres 97.2
2486 Female, age 94, both hemispheres 75.3
2201 Male, age 74, unknown 70.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 90.3
Samples: 246

Max nTPM: 141.1
Min nTPM: 65.9
Std nTPM: 13.8
Median nTPM: 87.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 141.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 137.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 135.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 125.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 124.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 123.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 122.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 122.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 121.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 120.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 117.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 116.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 115.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 115.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 115.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 114.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 113.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 113.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 112.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 111.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 111.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 110.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 110.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 109.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 109.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 109.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 109.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 109.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 108.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 108.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 108.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 108.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 108.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 107.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 107.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 106.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 105.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 105.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 104.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 104.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 104.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 103.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 103.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 101.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 101.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 100.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 100.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 100.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 100.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 100.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 100.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 99.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 99.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 99.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 98.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 98.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 97.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 97.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 97.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 97.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 96.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 96.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 96.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 96.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 96.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 96.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 96.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 96.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 95.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 94.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 94.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 94.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 94.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 94.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 94.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 94.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 94.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 93.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 93.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 93.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 92.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 92.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 92.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 92.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 92.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 92.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 92.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 92.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 92.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 92.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 92.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 91.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 91.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 91.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 91.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 91.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 91.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 90.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 90.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 90.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 90.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 90.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 90.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 89.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 89.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 89.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 89.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 89.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 89.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 89.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 88.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 88.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 87.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 87.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 87.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 87.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 87.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 87.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 86.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 86.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 86.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 86.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 86.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 86.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 86.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 86.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 86.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 85.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 85.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 85.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 85.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 85.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 85.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 84.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 84.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 84.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 84.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 84.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 84.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 83.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 83.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 83.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 83.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 83.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 83.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 82.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 82.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 82.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 82.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 82.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 82.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 82.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 81.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 81.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 81.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 81.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 81.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 81.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 81.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 81.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 80.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 80.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 80.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 80.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 80.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 80.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 80.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 80.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 79.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 79.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 79.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 78.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 78.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 78.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 78.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 78.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 78.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 78.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 77.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 77.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 77.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 77.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 77.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 77.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 77.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 77.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 77.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 76.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 76.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 76.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 76.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 75.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 75.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 75.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 74.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 74.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 74.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 74.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 74.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 73.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 73.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 73.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 73.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 73.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 72.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 72.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 71.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 71.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 70.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 70.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 70.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 69.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 69.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 68.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 68.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 66.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.9
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 99.4
Samples: 246

Max nTPM: 164.8
Min nTPM: 59.5
Std nTPM: 15.5
Median nTPM: 98.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 164.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 143.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 142.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 138.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 137.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 130.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 130.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 130.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 129.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 128.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 127.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 127.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 126.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 124.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 124.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 124.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 123.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 122.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 122.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 121.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 121.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 120.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 120.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 119.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 119.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 118.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 118.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 118.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 117.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 117.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 117.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 117.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 116.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 116.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 116.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 116.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 115.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 115.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 114.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 114.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 114.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 114.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 113.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 112.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 112.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 112.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 111.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 111.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 111.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 111.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 111.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 111.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 110.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 110.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 110.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 110.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 110.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 110.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 109.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 109.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 109.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 109.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 109.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 108.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 108.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 108.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 107.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 107.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 107.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 107.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 107.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 107.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 106.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 106.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 106.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 106.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 105.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 105.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 105.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 105.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 105.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 105.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 104.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 104.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 104.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 104.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 104.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 104.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 103.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 103.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 103.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 103.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 103.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 103.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 103.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 102.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 102.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 102.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 102.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 102.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 102.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 101.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 101.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 101.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 101.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 101.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 101.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 101.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 101.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 100.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 100.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 100.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 100.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 99.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 99.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 99.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 99.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 98.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 98.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 98.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 98.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 98.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 98.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 97.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 97.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 97.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 96.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 96.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 96.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 96.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 96.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 96.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 96.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 95.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 95.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 95.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 95.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 94.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 94.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 94.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 94.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 94.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 94.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 94.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 94.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 94.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 94.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 94.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 93.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 93.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 93.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 93.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 93.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 92.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 92.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 92.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 92.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 92.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 92.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 92.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 92.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 92.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 91.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 91.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 91.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 91.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 91.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 91.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 91.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 91.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 91.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 91.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 90.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 90.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 90.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 90.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 89.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 89.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 89.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 89.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 89.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 89.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 89.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 89.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 89.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 88.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 88.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 87.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 87.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 87.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 87.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 87.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 87.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 86.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 86.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 86.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 86.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 85.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 85.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 85.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 85.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 85.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 85.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 85.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 85.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 85.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 84.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 84.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 84.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 83.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 83.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 83.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 83.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 83.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 82.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 82.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 82.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 82.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 82.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 81.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 81.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 81.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 81.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 80.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 79.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 79.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 78.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 78.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 78.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 78.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 76.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 75.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 75.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 75.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 75.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 73.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 73.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 71.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 70.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 70.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 69.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 69.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 68.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 59.5
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 94.9
Samples: 205

Max nTPM: 140.1
Min nTPM: 68.1
Std nTPM: 14.8
Median nTPM: 92.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 140.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 139.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 138.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 133.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 130.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 128.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 127.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 127.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 127.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 123.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 123.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 121.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 120.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 120.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 120.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 118.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 116.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 116.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 116.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 116.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 116.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 115.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 114.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 112.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 112.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 112.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 111.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 111.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 111.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 111.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 110.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 110.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 110.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 109.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 109.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 109.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 109.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 108.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 107.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 107.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 107.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 107.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 105.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 105.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 105.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 104.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 104.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 104.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 104.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 104.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 104.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 103.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 103.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 103.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 103.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 103.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 102.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 102.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 102.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 101.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 101.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 101.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 100.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 100.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 99.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 99.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 99.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 99.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 99.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 98.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 98.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 98.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 97.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 97.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 97.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 97.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 97.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 97.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 97.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 97.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 96.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 96.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 96.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 96.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 96.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 96.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 95.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 95.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 95.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 95.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 95.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 94.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 94.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 94.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 94.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 94.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 94.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 93.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 93.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 93.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 93.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 93.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 92.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 92.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 92.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 92.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 92.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 92.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 92.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 92.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 91.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 91.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 91.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 90.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 90.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 90.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 90.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 89.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 89.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 89.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 89.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 89.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 88.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 88.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 88.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 88.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 88.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 88.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 87.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 87.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 87.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 87.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 87.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 87.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 87.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 87.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 86.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 86.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 86.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 86.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 85.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 85.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 85.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 85.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 85.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 85.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 85.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 85.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 84.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 84.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 84.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 84.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 84.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 84.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 84.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 84.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 84.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 83.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 82.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 82.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 82.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 82.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 81.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 81.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 81.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 81.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 81.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 80.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 80.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 80.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 80.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 80.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 79.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 79.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 79.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 79.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 79.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 79.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 78.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 78.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 78.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 77.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 77.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 76.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 76.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 76.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 75.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 75.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 75.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 75.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 75.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 74.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 73.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 72.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 72.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 71.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 71.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 71.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 69.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 69.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 68.1
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

188.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 141.4
FF:10164-103B2 76 years, female 141.4
Nucleus accumbens
Scaled Tags Per Million: 141.7
FF:10037-101F1 23-56 years, mixed 141.7
Putamen
Scaled Tags Per Million: 188.6
FF:10176-103C5 60 years, female 188.6
Globus pallidus
Scaled Tags Per Million: 172.1
FF:10175-103C4 60 years, female 216.5
FF:10161-103A8 76 years, female 127.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.7
Pig sample Sample description nTPM
Caudate
nTPM: 15.3
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.7
Sample A Female 15.9
Sample B Female 16.9
Sample C Male 15.8
Sample D Male 12.7
Putamen
nTPM: 17.7
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.0
Sample A Female 21.0
Sample B Female 14.0
Sample C Male 18.3
Sample D Male 17.4
Septum
nTPM: 17.8
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.4
Sample A Female 20.1
Sample B Female 17.0
Sample C Male 18.5
Sample D Male 15.4
Ventral pallidum
nTPM: 16.9
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.2
Sample A Female 15.2
Sample B Female 20.3
Sample C Male 16.6
Sample D Male 15.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

17.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 17.9
Samples: 4

Max nTPM: 20.5
Min nTPM: 15.7
Sample A Male 15.7
Sample B Male 17.1
Sample C Female 18.3
Sample D Female 20.5
Septum
nTPM: 14.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 14.3
Sample A Male 14.5
Sample B Male 15.5
Sample C Female 14.3
Sample D Female 14.7
Ventral forebrain
nTPM: 14.2
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.3
Sample A Male 13.9
Sample B Male 13.8
Sample C Female 12.3
Sample D Female 16.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
68631893 Antisense, RP_050125_01_C09, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.3
68631893 Antisense, RP_050125_01_C09, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org