PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:99.3 nTPM
FANTOM5:170.2 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:20.1 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 99.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 70.9
2188 Female, age 91, both hemispheres 77.7
2090 Male, age 80, both hemispheres 76.8
1984 Male, age 76, both hemispheres 67.7
2301 Female, age 85, both hemispheres 61.4
Area postrema
nTPM: 74.4
2054 Male, age 76, both hemispheres 78.0
2306 Male, age 80, both hemispheres 73.6
2799 Male, age 61, both hemispheres 71.6
Dorsal cochlear nucleus
nTPM: 72.2
2187 Female, age 91, both hemispheres 81.3
2802 Male, age 74, right hemisphere 73.9
2058 Male, age 76, both hemispheres 73.2
2378 Male, age 80, both hemispheres 66.5
2370 Male, age 61, both hemispheres 66.4
Dorsal medullary reticular nucleus
nTPM: 74.6
2040 Female, age 85, both hemispheres 96.1
2088 Male, age 76, both hemispheres 64.0
2373 Male, age 61, both hemispheres 63.7
Dorsal motor vagal complex
nTPM: 73.5
2133 Female, age 91, both hemispheres 93.3
2844 Male, age 55, unknown 90.0
2000 Male, age 74, unknown 85.7
2813 Female, age 72, unknown 80.2
2643 Male, age 74, both hemispheres 74.0
2185 Male, age 76, both hemispheres 62.2
2807 Female, age 85, both hemispheres 51.7
2797 Male, age 61, both hemispheres 50.4
Dorsal tegmental nucleus
nTPM: 80.3
2083 Male, age 80, both hemispheres 90.1
2358 Male, age 61, both hemispheres 86.2
2326 Male, age 74, both hemispheres 78.4
1936 Male, age 76, left hemisphere 66.7
Dorsolateral tegmental area
nTPM: 82.3
2654 Male, age 80, both hemispheres 89.2
2751 Female, age 85, both hemispheres 87.7
2360 Male, age 74, both hemispheres 84.3
2337 Male, age 61, both hemispheres 79.2
2141 Male, age 76, both hemispheres 70.8
Gigantocellular reticular nuclei, medullary
nTPM: 78.6
1876 Female, age 85, both hemispheres 88.4
2462 Male, age 74, both hemispheres 86.0
2387 Female, age 91, both hemispheres 79.4
2022 Male, age 76, right hemisphere 77.4
2314 Male, age 61, both hemispheres 72.3
2310 Male, age 80, both hemispheres 68.2
Gigantocellular reticular nuclei, pars
nTPM: 72.8
2168 Male, age 76, both hemispheres 87.6
2084 Female, age 85, both hemispheres 82.7
2336 Male, age 61, both hemispheres 69.2
2706 Male, age 80, both hemispheres 64.0
2330 Male, age 80, both hemispheres 60.5
Inferior olive
nTPM: 78.1
2563 Male, age 74, both hemispheres 95.9
2085 Female, age 85, both hemispheres 76.0
2178 Male, age 61, both hemispheres 75.9
2379 Male, age 80, both hemispheres 71.8
2628 Female, age 91, both hemispheres 71.1
Kolliker-Fuse nucleus
nTPM: 84.6
2315 Male, age 76, right hemisphere 95.0
2163 Male, age 80, both hemispheres 87.5
2793 Female, age 91, left hemisphere 71.3
Lateral lemniscal nuclei
nTPM: 78.8
2169 Male, age 76, both hemispheres 91.5
2746 Female, age 85, left hemisphere 89.8
2453 Male, age 74, right hemisphere 75.0
2036 Male, age 80, both hemispheres 74.3
2320 Female, age 91, left hemisphere 63.1
Lateral medullary reticular nucleus
nTPM: 82.4
2305 Male, age 74, both hemispheres 100.0
2044 Male, age 76, both hemispheres 86.4
2852 Male, age 80, both hemispheres 80.6
2804 Female, age 91, both hemispheres 78.7
2190 Female, age 85, both hemispheres 77.3
2374 Male, age 61, both hemispheres 71.6
Lateral parabrachial nucleus
nTPM: 80.8
2139 Female, age 85, right hemisphere 92.5
2013 Male, age 80, both hemispheres 84.3
2792 Male, age 76, both hemispheres 78.6
2790 Male, age 61, both hemispheres 67.9
Lateral vestibular nucleus
nTPM: 74.7
2184 Male, age 76, both hemispheres 75.4
2311 Male, age 80, both hemispheres 74.1
Locus coeruleus
nTPM: 99.3
2014 Male, age 55, unknown 122.1
2123 Female, age 91, both hemispheres 116.3
2788 Male, age 74, unknown 103.7
2317 Female, age 72, unknown 95.9
1980 Male, age 76, both hemispheres 93.1
2720 Male, age 74, both hemispheres 82.7
2162 Male, age 80, both hemispheres 81.0
Medial olivary nucleus
nTPM: 84.0
1943 Male, age 61, both hemispheres 90.4
2138 Female, age 91, both hemispheres 88.4
1962 Male, age 76, both hemispheres 82.5
2851 Male, age 80, both hemispheres 74.8
Medial parabrachial nucleus
nTPM: 79.8
2170 Female, age 91, both hemispheres 90.2
2854 Male, age 80, both hemispheres 82.9
2463 Female, age 85, right hemisphere 76.9
2786 Male, age 76, both hemispheres 74.8
2156 Male, age 61, both hemispheres 74.1
Medial periolivary nuclei
nTPM: 84.6
2063 Male, age 76, both hemispheres 102.1
2791 Male, age 74, right hemisphere 92.6
2171 Female, age 85, both hemispheres 91.9
2081 Male, age 80, both hemispheres 75.5
2458 Female, age 91, both hemispheres 60.8
Medial vestibular nucleus
nTPM: 81.8
2801 Male, age 74, both hemispheres 87.2
2134 Male, age 76, both hemispheres 84.8
2803 Female, age 91, both hemispheres 84.1
2743 Female, age 85, both hemispheres 82.2
2093 Male, age 80, both hemispheres 81.1
2624 Male, age 61, both hemispheres 71.2
Motor facial nucleus
nTPM: 78.9
2062 Male, age 76, both hemispheres 100.8
2365 Male, age 74, right hemisphere 94.2
2126 Male, age 61, both hemispheres 75.3
2697 Female, age 85, both hemispheres 72.7
2795 Female, age 91, both hemispheres 70.4
2327 Male, age 80, both hemispheres 60.3
Motor hypoglossal nucleus
nTPM: 80.7
2125 Female, age 91, both hemispheres 90.9
2132 Female, age 85, both hemispheres 85.9
2461 Male, age 61, both hemispheres 79.5
2277 Male, age 76, both hemispheres 74.5
2182 Male, age 80, both hemispheres 72.9
Motor trigeminal nucleus
nTPM: 71.9
2560 Male, age 74, both hemispheres 78.7
2079 Male, age 80, both hemispheres 76.9
2309 Male, age 76, both hemispheres 73.2
2335 Male, age 61, both hemispheres 69.9
2321 Female, age 91, both hemispheres 60.9
Nuclei of the trapezoid body
nTPM: 83.1
1983 Male, age 76, both hemispheres 98.5
2735 Female, age 85, both hemispheres 95.8
2159 Male, age 61, both hemispheres 92.9
2166 Male, age 80, both hemispheres 68.0
2368 Female, age 91, both hemispheres 60.3
Nucleus ambiguus
nTPM: 87.2
2071 Male, age 76, both hemispheres 89.7
2096 Female, age 85, both hemispheres 84.7
Nucleus cuneatus
nTPM: 65.6
2564 Male, age 74, both hemispheres 89.0
2380 Male, age 80, both hemispheres 70.7
2376 Male, age 61, both hemispheres 66.9
2381 Male, age 80, both hemispheres 65.8
2131 Male, age 76, both hemispheres 64.1
2808 Female, age 85, both hemispheres 61.3
2100 Male, age 76, both hemispheres 59.5
2562 Male, age 61, both hemispheres 59.3
2805 Female, age 91, both hemispheres 53.5
Nucleus gracilis
nTPM: 71.4
2627 Male, age 74, both hemispheres 88.3
2382 Male, age 80, both hemispheres 68.7
2299 Female, age 85, both hemispheres 57.3
Nucleus raphe magnus
nTPM: 84.7
2160 Male, age 61, both hemispheres 116.9
2172 Female, age 85, both hemispheres 91.1
2455 Male, age 74, both hemispheres 86.7
2051 Male, age 76, both hemispheres 79.6
2459 Female, age 91, both hemispheres 67.2
2328 Male, age 80, both hemispheres 66.9
Nucleus raphe obscurus
nTPM: 80.4
2845 Female, age 85, midline 83.2
2142 Male, age 76, midline 79.8
2800 Male, age 61, midline 78.4
Nucleus raphe pallidus
nTPM: 94.5
1924 Male, age 61, midline 110.4
2183 Male, age 80, midline 93.9
2145 Male, age 76, midline 79.3
Nucleus tractus solitarii
nTPM: 74.5
2144 Female, age 91, right hemisphere 95.6
2656 Male, age 76, both hemispheres 82.3
2191 Female, age 85, both hemispheres 64.0
2307 Male, age 80, both hemispheres 56.1
Paramedian reticular nucleus
nTPM: 89.3
2050 Female, age 85, both hemispheres 96.6
2057 Male, age 80, both hemispheres 91.7
2052 Male, age 76, both hemispheres 85.4
2313 Male, age 61, both hemispheres 83.5
Parvicellular reticular nuclei
nTPM: 78.0
2119 Male, age 80, both hemispheres 91.2
2095 Male, age 76, both hemispheres 78.5
2558 Male, age 74, both hemispheres 64.4
Parvicellular reticular nuclei, medullary
nTPM: 83.9
2189 Female, age 91, both hemispheres 91.0
2091 Female, age 85, both hemispheres 83.7
2181 Male, age 80, left hemisphere 76.9
Pedunculopontine tegmental nucleus
nTPM: 83.9
2334 Male, age 80, both hemispheres 86.5
2338 Male, age 61, both hemispheres 84.4
1921 Female, age 85, both hemispheres 81.0
Peritrigeminal nucleus
nTPM: 87.7
2067 Female, age 85, both hemispheres 94.0
2136 Male, age 76, both hemispheres 86.5
2179 Male, age 61, both hemispheres 82.6
Pontine nuclei
nTPM: 94.7
2727 Male, age 61, right hemisphere 114.9
1863 Male, age 55, unknown 114.0
2787 Female, age 85, both hemispheres 107.9
2109 Female, age 72, unknown 99.3
2454 Male, age 74, left hemisphere 92.5
1968 Male, age 76, left hemisphere 88.1
2115 Male, age 80, left hemisphere 71.3
2319 Female, age 91, both hemispheres 70.1
Pontine raphe nucleus
nTPM: 91.7
2122 Female, age 85, midline 97.4
2853 Male, age 76, midline 86.0
Posteroventral cochlear nucleus
nTPM: 78.1
2752 Female, age 85, both hemispheres 86.7
2070 Male, age 76, both hemispheres 83.7
2341 Male, age 80, both hemispheres 78.6
2135 Female, age 91, both hemispheres 77.1
2371 Male, age 61, both hemispheres 64.7
Prepositus hypoglossal nucleus
nTPM: 79.7
2855 Female, age 85, right hemisphere 81.6
2086 Male, age 80, both hemispheres 77.8
Principal sensory trigeminal nucleus
nTPM: 77.6
2158 Male, age 61, both hemispheres 93.0
2008 Male, age 80, left hemisphere 81.8
2367 Female, age 91, left hemisphere 68.2
2324 Male, age 76, both hemispheres 67.5
Reticular pontine nucleus, caudal
nTPM: 78.2
2092 Male, age 76, both hemispheres 94.1
2559 Male, age 74, both hemispheres 82.0
2457 Female, age 91, both hemispheres 69.4
2332 Male, age 80, right hemisphere 67.2
Reticular pontine nucleus, oral
nTPM: 88.5
2361 Male, age 74, both hemispheres 112.4
2012 Female, age 85, both hemispheres 93.9
1939 Male, age 80, both hemispheres 91.3
2167 Male, age 76, both hemispheres 78.9
2366 Female, age 91, both hemispheres 65.9
Reticulotegmental nucleus
nTPM: 73.6
2325 Male, age 76, both hemispheres 78.6
2452 Male, age 74, both hemispheres 77.3
2333 Male, age 80, both hemispheres 69.3
2322 Female, age 91, both hemispheres 69.2
Spinal trigeminal nucleus, caudal
nTPM: 76.3
2390 Female, age 91, both hemispheres 93.8
2642 Male, age 74, both hemispheres 77.2
2447 Male, age 76, both hemispheres 73.1
2312 Male, age 61, both hemispheres 70.5
2308 Male, age 80, both hemispheres 66.8
Spinal trigeminal nucleus, interpolar
nTPM: 88.7
2625 Male, age 61, both hemispheres 100.8
2066 Male, age 76, right hemisphere 98.6
2033 Male, age 80, both hemispheres 86.5
2386 Female, age 85, both hemispheres 83.0
2389 Female, age 91, both hemispheres 74.8
Spinal trigeminal nucleus, oral
nTPM: 75.7
2737 Female, age 85, both hemispheres 80.0
2164 Male, age 80, both hemispheres 76.8
1978 Male, age 76, both hemispheres 70.4
Spinal vestibular nucleus
nTPM: 78.8
2186 Female, age 91, both hemispheres 86.4
2780 Male, age 80, both hemispheres 85.7
2748 Male, age 76, both hemispheres 81.6
2806 Female, age 85, both hemispheres 78.2
2384 Male, age 74, both hemispheres 71.7
2796 Male, age 61, both hemispheres 69.2
Subcoeruleus area
nTPM: 80.7
1958 Male, age 80, both hemispheres 87.4
2323 Female, age 91, left hemisphere 85.5
2369 Female, age 85, left hemisphere 84.2
2089 Male, age 76, left hemisphere 73.2
2451 Male, age 74, both hemispheres 73.2
Superior olive
nTPM: 86.0
1875 Female, age 85, both hemispheres 108.6
2364 Male, age 74, right hemisphere 103.0
2020 Male, age 76, both hemispheres 92.0
2329 Male, age 80, right hemisphere 66.8
2561 Female, age 91, both hemispheres 59.4
Superior vestibular nucleus
nTPM: 88.6
2383 Male, age 74, both hemispheres 100.8
2015 Male, age 80, both hemispheres 86.2
2061 Male, age 76, both hemispheres 78.9
Ventral medullary reticular nucleus
nTPM: 76.2
2060 Male, age 76, both hemispheres 81.9
2372 Male, age 61, both hemispheres 70.5
Ventral periolivary nuclei
nTPM: 79.5
2023 Male, age 76, both hemispheres 92.7
2130 Female, age 85, both hemispheres 88.8
2165 Male, age 80, both hemispheres 78.6
2794 Female, age 91, left hemisphere 57.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 83.2
1986 Male, age 76, both hemispheres 90.4
2741 Female, age 85, both hemispheres 87.0
2180 Male, age 61, both hemispheres 85.5
2118 Male, age 80, both hemispheres 78.5
2302 Female, age 91, both hemispheres 74.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 77.4
2359 Male, age 61, both hemispheres 82.4
2840 Female, age 85, both hemispheres 82.0
1959 Male, age 76, both hemispheres 81.7
2449 Male, age 74, both hemispheres 81.0
2161 Male, age 80, both hemispheres 71.6
2456 Female, age 91, both hemispheres 65.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 170.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 170.2
FF:10182-103D2 60 years, female 203.9
FF:10165-103B3 76 years, female 136.6
Medulla oblongata
Scaled Tags Per Million: 167.8
FF:10174-103C3 60 years, female 256.4
FF:10038-101F2 18-64 years, mixed 131.6
FF:10155-103A2 76 years, female 115.5
Pons
Scaled Tags Per Million: 148.4
FF:10033-101E6 18-54 years, mixed 148.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 24.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 24.0
Samples: 4

Max nTPM: 25.1
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 23.7
Sample C Male 24.1
Sample D Male 25.1
Pons
nTPM: 21.2
Samples: 4

Max nTPM: 24.0
Min nTPM: 19.0
Sample A Female 20.1
Sample B Female 19.0
Sample C Male 21.8
Sample D Male 24.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 20.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 20.1
Samples: 4

Max nTPM: 21.3
Min nTPM: 18.0
Sample A Male 18.0
Sample B Male 21.2
Sample C Female 21.3
Sample D Female 19.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
68631893 Antisense, RP_050125_01_C09, Mouse strain C57BL/6J (56 days, male) 0.5
Pons
Expression energy: 0.5
68631893 Antisense, RP_050125_01_C09, Mouse strain C57BL/6J (56 days, male) 0.5

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