Expression of NACA in testis cancer - The Human Protein Atlas

TESTICULAR GERM CELL TUMOR (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

NACA is not prognostic in Testicular Germ Cell Tumor (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1411.3

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

1620.2

Number of samples

133

Samples

Sample	Description	pTPM
TCGA-2G-AAGW-01A	38 years, male, white, stage:Stage IS, alive, 4899 days	3532.9
TCGA-VF-A8A8-01A	18 years, male, white, stage:Stage IA, alive, 1131 days	2897.5
TCGA-2G-AAHP-01A	31 years, male, white, stage:Stage IS, alive, 5667 days	2713.8
TCGA-4K-AAAL-01A	31 years, male, white, stage:Stage IS, alive, 483 days	2667.7
TCGA-2G-AAGJ-01A	28 years, male, black or african american, stage:Stage IA, alive, 2938 days	2456.5
TCGA-W4-A7U2-01A	26 years, male, white, stage:'--, alive, 1263 days	2456.1
TCGA-VF-A8AD-01A	36 years, male, white, stage:Stage IB, alive, 1006 days	2354.6
TCGA-ZM-AA06-01A	45 years, male, white, stage:Stage IB, alive, 1498 days	2292.1
TCGA-2G-AAG0-01A	23 years, male, white, stage:Stage IS, alive, 1529 days	2277.8
TCGA-XE-AAOL-01A	38 years, male, black or african american, stage:Stage I, alive, 13 days	2262.3
TCGA-XE-AAOJ-01A	24 years, male, white, stage:Stage IS, alive, 1550 days	2243.4
TCGA-2G-AAF4-01A	30 years, male, white, stage:Stage I, alive, 2315 days	2169.9
TCGA-ZM-AA0B-01A	32 years, male, white, stage:Stage IA, alive, 838 days	2142.2
TCGA-2G-AALP-01A	43 years, male, white, stage:Stage IIIB, alive, 2645 days	2139.7
TCGA-2G-AAFZ-01A	32 years, male, white, stage:Stage III, alive, 1353 days	2135.1
TCGA-2G-AAFO-01A	33 years, male, white, stage:Stage IIA, alive, 685 days	2126.8
TCGA-XE-A8H5-01A	29 years, male, stage:Stage IS, alive, 1217 days	2125.0
TCGA-SN-A84X-01A	21 years, male, white, stage:Stage IS, alive, 312 days	2103.0
TCGA-YU-A90Y-01A	23 years, male, black or african american, stage:Stage IIIC, dead, 17 days	2088.7
TCGA-XE-A9SE-01A	35 years, male, white, stage:Stage IA, alive, 708 days	2079.9
TCGA-S6-A8JX-01A	27 years, male, white, stage:Stage IB, alive, 552 days	2074.9
TCGA-YU-A94D-01A	28 years, male, stage:Stage IIIB, alive, 2167 days	2065.1
TCGA-XE-AAO3-01A	33 years, male, asian, stage:Stage I, alive, 2857 days	2004.1
TCGA-2G-AAG9-01A	25 years, male, white, stage:Stage IIIB, alive, 2234 days	1992.4
TCGA-XE-A8H1-01A	24 years, male, white, stage:Stage IS, alive, 209 days	1982.0
TCGA-XE-AANJ-01A	39 years, male, white, stage:Stage IS, alive, 2007 days	1942.8
TCGA-YU-A90W-01A	45 years, male, white, stage:Stage IA, alive, 1113 days	1918.6
TCGA-2G-AAKG-01A	22 years, male, white, stage:Stage I, alive, 6598 days	1908.3
TCGA-2G-AAFI-01A	41 years, male, white, stage:Stage IB, alive, 675 days	1902.7
TCGA-XE-AAO6-01A	47 years, male, white, stage:Stage IA, alive, 240 days	1894.8
TCGA-2G-AAFN-01A	26 years, male, white, stage:Stage IIIB, alive, 773 days	1894.6
TCGA-XE-AAO4-01A	40 years, male, white, stage:Stage IA, alive, 367 days	1886.5
TCGA-2G-AAKD-01A	18 years, male, white, stage:Stage III, alive, 6340 days	1852.5
TCGA-2G-AAH0-01A	30 years, male, white, stage:Stage IS, alive, 5477 days	1841.2
TCGA-VF-A8A9-01A	31 years, male, white, stage:Stage IA, alive, 1119 days	1836.6
TCGA-2G-AAGA-01A	38 years, male, white, stage:Stage IIA, alive, 2439 days	1823.3
TCGA-YU-A90P-01A	25 years, male, white, stage:Stage IA, alive, 2069 days	1804.9
TCGA-2G-AAH3-01A	20 years, male, white, stage:Stage I, alive, 1822 days	1796.1
TCGA-VF-A8AE-01A	39 years, male, white, stage:Stage IA, alive, 727 days	1778.9
TCGA-XE-AANR-01A	23 years, male, white, stage:Stage I, alive, 14 days	1773.2
TCGA-2G-AAFY-01A	24 years, male, white, stage:Stage IIA, alive, 1099 days	1768.5
TCGA-YU-A912-01A	34 years, male, black or african american, stage:Stage IIIC, alive, 866 days	1763.1
TCGA-2G-AAL7-01A	32 years, male, white, stage:Stage IS, alive, 3991 days	1759.3
TCGA-ZM-AA0D-01A	34 years, male, white, stage:Stage IA, alive, 848 days	1758.7
TCGA-2G-AAL5-01A	31 years, male, white, stage:Stage I, alive, 7437 days	1741.7
TCGA-2G-AAGE-01A	21 years, male, white, stage:Stage IS, alive, 2478 days	1729.8
TCGA-SB-A6J6-01A	22 years, male, white, stage:Stage IA, alive, 413 days	1703.4
TCGA-2G-AAKH-01A	19 years, male, white, stage:Stage II, alive, 6862 days	1679.7
TCGA-2G-AAFH-01A	38 years, male, white, stage:Stage IIB, alive, 1375 days	1668.1
TCGA-2G-AAGK-01A	20 years, male, white, stage:Stage IS, alive, 3621 days	1657.3
TCGA-SN-A84Y-01A	18 years, male, white, stage:Stage IS, alive, 524 days	1654.8
TCGA-2G-AAH8-01A	45 years, male, white, stage:Stage IIIC, alive, 2248 days	1650.7
TCGA-XE-A8H4-01A	23 years, male, white, stage:Stage IA, alive, 559 days	1649.6
TCGA-2G-AAGN-01A	41 years, male, white, stage:Stage IIIB, alive, 3656 days	1648.9
TCGA-2G-AAF8-01A	33 years, male, white, stage:Stage IA, alive, 3911 days	1633.8
TCGA-2G-AAKM-01A	14 years, male, white, stage:Stage II, dead, 6972 days	1629.6
TCGA-YU-A90Q-01A	21 years, male, stage:Stage IB, alive, 1964 days	1629.6
TCGA-WZ-A8D5-01A	38 years, male, white, stage:'--, alive, 774 days	1624.5
TCGA-2G-AAKL-01A	26 years, male, white, stage:Stage II, alive, 7023 days	1615.4
TCGA-2G-AAGO-01A	41 years, male, white, stage:Stage IS, alive, 4026 days	1614.7
TCGA-2G-AAGS-01A	39 years, male, white, stage:Stage IIIB, alive, 4816 days	1609.7
TCGA-2G-AAG7-01A	33 years, male, white, stage:Stage IS, alive, 2475 days	1608.3
TCGA-2G-AAFL-01A	35 years, male, white, stage:Stage IB, alive, 750 days	1602.9
TCGA-2G-AAHC-01A	33 years, male, white, stage:Stage IS, alive, 5539 days	1599.3
TCGA-2G-AAF6-01A	28 years, male, white, stage:Stage IS, alive, 3491 days	1595.2
TCGA-S6-A8JW-01A	37 years, male, white, stage:Stage IS, alive, 698 days	1592.8
TCGA-2G-AAHT-01A	32 years, male, white, stage:Stage IS, alive, 542 days	1589.2
TCGA-ZM-AA0N-01A	44 years, male, white, stage:Stage IB, alive, 634 days	1584.9
TCGA-2G-AAHL-01A	26 years, male, white, stage:Stage I, alive, 7081 days	1583.4
TCGA-2G-AAGM-01A	51 years, male, white, stage:Stage IS, alive, 3891 days	1579.2
TCGA-XE-AAOC-01A	31 years, male, white, stage:Stage IA, alive, 270 days	1557.1
TCGA-ZM-AA0E-01A	39 years, male, white, stage:Stage IA, alive, 811 days	1552.1
TCGA-2G-AAGC-01A	28 years, male, white, stage:Stage IS, alive, 2585 days	1541.6
TCGA-XE-AAOD-01A	39 years, male, white, stage:Stage IB, alive, 2058 days	1536.9
TCGA-VF-A8AC-01A	29 years, male, white, stage:Stage IA, alive, 1083 days	1531.5
TCGA-YU-AA4L-01A	27 years, male, black or african american, stage:Stage IIIC, alive, 1573 days	1529.5
TCGA-2G-AAHN-01A	32 years, male, white, stage:Stage I, alive, 6445 days	1526.4
TCGA-2G-AAH4-01A	34 years, male, white, stage:Stage II, alive, 6210 days	1522.5
TCGA-SN-A84W-01A	30 years, male, white, stage:Stage IS, alive, 293 days	1519.2
TCGA-VF-A8AB-01A	31 years, male, black or african american, stage:Stage IA, alive, 760 days	1496.0
TCGA-2G-AAGF-01A	28 years, male, white, stage:Stage IS, alive, 2734 days	1495.6
TCGA-SO-A8JP-01A	29 years, male, white, stage:Stage I, alive, 540 days	1492.7
TCGA-X3-A8G4-01A	33 years, male, white, stage:Stage IS, alive, 856 days	1468.9
TCGA-WZ-A7V5-01A	27 years, male, white, stage:Stage I, alive, 1061 days	1452.8
TCGA-4K-AA1I-01A	26 years, male, white, stage:Stage IA, alive, 3 days	1438.8
TCGA-4K-AA1H-01A	26 years, male, white, stage:Stage IA, alive, 518 days	1428.4
TCGA-SB-A76C-01A	38 years, male, white, stage:'--, alive, 42 days	1426.9
TCGA-2G-AAFM-01A	31 years, male, white, stage:Stage IIA, alive, 503 days	1420.9
TCGA-VF-A8AA-01A	51 years, male, white, stage:Stage I, alive, 1146 days	1419.1
TCGA-2G-AAFJ-01A	23 years, male, asian, stage:'--, alive, 792 days	1411.3
TCGA-2G-AAEW-01A	31 years, male, white, stage:Stage IS, dead, 618 days	1404.9
TCGA-2X-A9D6-01A	42 years, male, white, stage:Stage I, alive, 607 days	1392.6
TCGA-2G-AAGX-01A	22 years, male, white, stage:Stage IA, alive, 5514 days	1373.1
TCGA-2G-AAGY-01A	28 years, male, white, stage:Stage IS, alive, 5329 days	1372.4
TCGA-2G-AAFG-01A	30 years, male, white, stage:Stage IS, alive, 6183 days	1371.8
TCGA-2G-AAEX-01A	38 years, male, white, stage:Stage IS, alive, 1259 days	1356.2
TCGA-2G-AAG5-01A	36 years, male, white, stage:Stage IS, alive, 2299 days	1356.0
TCGA-2G-AAGI-01A	33 years, male, white, stage:Stage IS, alive, 3137 days	1333.3
TCGA-2G-AAGV-01A	23 years, male, white, stage:'--, alive, 4527 days	1332.1
TCGA-ZM-AA0F-01A	35 years, male, white, stage:Stage IA, alive, 681 days	1331.0
TCGA-W4-A7U4-01A	23 years, male, white, stage:'--, alive, 738 days	1329.5
TCGA-2G-AAHA-01A	48 years, male, white, stage:Stage IB, alive, 3349 days	1319.2
TCGA-4K-AA1G-01A	34 years, male, white, stage:Stage IS, alive, 436 days	1313.1
TCGA-S6-A8JY-01A	27 years, male, white, stage:Stage IS, alive, 278 days	1304.1
TCGA-XE-AAOF-01A	50 years, male, asian, stage:Stage IA, alive, 1268 days	1294.2
TCGA-2G-AAG6-01A	24 years, male, white, stage:Stage IS, alive, 2231 days	1292.6
TCGA-2G-AAF1-01A	28 years, male, asian, stage:Stage IS, alive, 1403 days	1273.2
TCGA-2G-AAFE-01A	37 years, male, white, stage:Stage IIA, alive, 4702 days	1261.0
TCGA-2G-AAH2-01A	20 years, male, white, stage:Stage IS, alive, 6060 days	1229.8
TCGA-W4-A7U3-01A	26 years, male, white, stage:'--, alive, 149 days	1227.4
TCGA-WZ-A7V3-01A	20 years, male, white, stage:Stage I, alive, 753 days	1221.5
TCGA-XY-A8S2-01A	67 years, male, white, stage:Stage I, alive, 672 days	1188.8
TCGA-2X-A9D5-01A	49 years, male, white, stage:Stage I, alive, 435 days	1182.8
TCGA-2G-AAGG-01A	20 years, male, white, stage:Stage IIIC, alive, 2611 days	1174.8
TCGA-2G-AAHG-01A	25 years, male, white, stage:Stage I, alive, 1819 days	1168.6
TCGA-XE-AANV-01A	52 years, male, stage:Stage IB, alive, 1701 days	1162.6
TCGA-2G-AAG3-01A	53 years, male, white, stage:Stage IS, alive, 1593 days	1133.8
TCGA-2G-AAGT-01A	30 years, male, white, stage:Stage IS, alive, 4406 days	1121.2
TCGA-ZM-AA0H-01A	50 years, male, white, stage:Stage IS, alive, 1736 days	1120.1
TCGA-YU-A90S-01A	26 years, male, white, stage:Stage IA, alive, 971 days	1115.1
TCGA-2G-AAFV-01A	31 years, male, white, stage:Stage IS, alive, 1389 days	1095.5
TCGA-2G-AAGZ-01A	27 years, male, white, stage:Stage IIIA, alive, 5233 days	1092.2
TCGA-2G-AAG8-01A	21 years, male, white, stage:Stage IB, alive, 2289 days	1067.7
TCGA-XY-A9T9-01A	37 years, male, white, stage:Stage IS, alive, 281 days	1063.5
TCGA-XE-AANI-01A	37 years, male, white, stage:Stage IS, alive, 1041 days	1062.8
TCGA-2G-AAGP-01A	33 years, male, white, stage:Stage IIA, alive, 4018 days	1021.5
TCGA-YU-A94I-01A	66 years, male, stage:Stage IA, alive, 536 days	1017.6
TCGA-YU-AA61-01A	29 years, male, white, stage:Stage IS, alive, 864 days	1001.3
TCGA-WZ-A7V4-01A	28 years, male, white, stage:Stage I, alive, 894 days	979.6
TCGA-SN-A6IS-01A	26 years, male, white, stage:Stage IS, alive, 496 days	938.8
TCGA-XY-A89B-01A	35 years, male, white, stage:Stage IA, alive, 471 days	881.1
TCGA-ZM-AA05-01A	36 years, male, white, stage:Stage IIC, alive, 1126 days	876.8
TCGA-XE-AAOB-01A	27 years, male, white, stage:Stage IS, dead, 513 days	806.5
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TESTIS CANCER - Protein expressionⁱ

Pending cancer tissue analysis