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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:22.3 nTPM
HPA Brain:41.6 nTPM
GTEx:22.3 nTPM
FANTOM5:131.2 Scaled Tags Per Million
Pig:45.9 nTPM
Mouse:46.3 nTPM
Allen mouse:3.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040472Antibody HPA048436Antibody CAB037302
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 38.8
1854 Male, age 80, left hemisphere 51.6
1857 Female, age 85, left hemisphere 51.6
2290 Female, age 72, unknown 40.7
2289 Male, age 61, right hemisphere 40.4
1781 Male, age 74, unknown 33.9
2846 Female, age 79, unknown 33.3
2288 Male, age 75, left hemisphere 29.8
2481 Female, age 94, left hemisphere 29.3
Globus pallidus, externus
nTPM: 13.2
2395 Male, age 75, both hemispheres 19.0
2646 Male, age 61, right hemisphere 17.4
2567 Female, age 72, unknown 10.1
1996 Male, age 80, right hemisphere 9.7
2772 Female, age 79, unknown 9.7
Globus pallidus, internus
nTPM: 11.7
2483 Female, age 94, right hemisphere 19.4
2287 Male, age 75, right hemisphere 15.1
1818 Male, age 74, unknown 11.2
2566 Female, age 72, unknown 11.2
2111 Female, age 85, right hemisphere 9.8
2778 Female, age 91, both hemispheres 8.0
2037 Male, age 80, right hemisphere 7.5
Nucleus accumbens
nTPM: 41.6
1856 Female, age 91, right hemisphere 62.4
2824 Male, age 61, right hemisphere 58.7
1783 Male, age 74, unknown 48.3
1806 Female, age 85, left hemisphere 46.8
2286 Male, age 75, left hemisphere 35.9
2698 Female, age 72, unknown 32.0
2732 Male, age 80, right hemisphere 24.8
2391 Female, age 94, left hemisphere 23.8
Nucleus basalis of Meynert
nTPM: 31.5
2393 Male, age 80, right hemisphere 47.9
2484 Female, age 94, left hemisphere 33.0
2821 Male, age 75, both hemispheres 24.4
2569 Male, age 61, both hemispheres 20.6
Nucleus of the diagonal band
nTPM: 34.8
1812 Female, age 91, both hemispheres 38.8
2029 Male, age 61, right hemisphere 36.8
2775 Male, age 80, right hemisphere 34.5
1979 Male, age 74, unknown 34.4
2195 Female, age 85, both hemispheres 29.8
Putamen
nTPM: 40.7
1838 Male, age 80, right hemisphere 63.1
1937 Female, age 91, right hemisphere 52.9
1829 Male, age 74, unknown 39.3
2647 Male, age 75, left hemisphere 39.3
2466 Female, age 79, unknown 35.2
2489 Female, age 72, unknown 29.6
2482 Female, age 94, left hemisphere 25.3
Septal nuclei
nTPM: 31.6
2199 Male, age 80, right hemisphere 38.2
2009 Female, age 91, both hemispheres 36.8
2031 Female, age 72, unknown 34.5
2629 Female, age 94, right hemisphere 34.3
2059 Female, age 85, both hemispheres 29.3
1960 Male, age 74, unknown 26.3
2394 Male, age 61, left hemisphere 21.9
Stria terminalis, bed nucleus
nTPM: 31.4
2486 Female, age 94, both hemispheres 38.4
1974 Female, age 91, both hemispheres 32.5
2201 Male, age 74, unknown 23.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 17.6
Samples: 246

Max nTPM: 40.2
Min nTPM: 4.1
Std nTPM: 7.1
Median nTPM: 17.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 34.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 31.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 31.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 31.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 31.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 30.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 30.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 30.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 30.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 30.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 30.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 30.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 30.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 29.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 29.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 28.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 28.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 27.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 27.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 27.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 27.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 27.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 27.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 26.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 26.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 26.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 26.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 26.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 26.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 26.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 26.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 25.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 25.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 25.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 25.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 25.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 25.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 25.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 25.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 25.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 25.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 25.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 25.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 24.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 24.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 24.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 24.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 23.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 23.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 23.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 23.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 23.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 23.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 23.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 22.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 22.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 22.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 22.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 22.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 22.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 22.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 22.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 22.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 22.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 22.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 22.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 22.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 22.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 21.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 21.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 21.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 21.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 21.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 21.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 21.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 21.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 21.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 21.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 21.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 20.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 20.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 20.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 20.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 20.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 20.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 20.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 20.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 20.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 20.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 19.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 19.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 19.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 19.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 19.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 18.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 18.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 18.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 18.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 18.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 18.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 18.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 18.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 18.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 18.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 18.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 18.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 18.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 18.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 18.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 18.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 18.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 17.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 17.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 17.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 17.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 17.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 17.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 17.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 17.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 17.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 17.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 17.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 17.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 17.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 17.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 16.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 16.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 16.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 16.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 16.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 16.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 16.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 16.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 15.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 15.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 15.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 15.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 15.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 15.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 15.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 15.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 15.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 15.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 14.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 14.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 14.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 14.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 14.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 13.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 13.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 13.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 13.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 13.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 13.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 13.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 13.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 12.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 12.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 12.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 12.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 12.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 12.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 12.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 12.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 12.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 12.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 11.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 11.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 11.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 11.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 11.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 11.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 11.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 10.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 10.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 10.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 10.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 10.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 10.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 10.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 10.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 10.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 9.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 9.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 9.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 9.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 9.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 9.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 9.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 8.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 8.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 8.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 8.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 8.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 8.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 8.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 7.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 7.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 7.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 7.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 7.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 6.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 6.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 6.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 6.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 5.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 5.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 5.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 4.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 22.3
Samples: 246

Max nTPM: 50.4
Min nTPM: 2.7
Std nTPM: 10.0
Median nTPM: 23.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 50.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 40.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 39.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 39.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 39.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 39.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 38.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 38.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 37.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 37.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 37.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 37.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 36.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 35.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 35.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 35.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 35.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 34.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 34.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 34.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 34.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 34.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 34.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 34.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 33.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 33.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 33.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 33.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 33.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 33.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 33.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 33.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 33.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 33.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 32.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 32.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 32.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 32.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 32.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 32.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 32.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 31.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 31.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 31.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 31.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 31.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 30.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 30.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 30.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 30.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 30.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 30.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 30.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 30.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 30.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 30.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 30.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 30.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 29.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 29.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 29.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 29.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 29.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 29.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 29.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 29.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 29.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 29.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 28.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 28.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 28.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 28.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 28.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 28.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 28.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 28.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 28.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 28.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 27.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 27.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 27.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 27.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 27.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 27.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 27.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 27.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 27.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 26.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 26.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 26.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 26.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 26.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 26.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 26.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 26.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 26.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 26.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 25.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 25.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 25.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 25.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 25.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 25.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 25.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 25.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 24.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 24.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 24.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 24.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 23.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 23.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 23.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 23.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 23.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 23.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 23.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 23.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 23.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 22.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 22.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 22.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 22.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 22.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 22.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 21.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 21.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 21.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 21.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 21.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 21.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 21.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 21.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 21.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 20.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 20.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 20.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 20.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 20.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 20.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 20.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 20.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 20.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 19.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 19.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 19.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 19.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 19.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 18.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 18.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 18.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 18.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 18.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 17.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 17.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 17.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 17.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 17.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 16.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 16.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 16.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 16.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 16.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 15.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 15.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 15.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 15.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 15.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 15.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 15.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 15.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 14.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 14.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 14.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 14.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 13.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 13.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 13.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 13.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 12.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 12.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 12.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 11.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 11.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 10.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 10.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 10.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 10.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 10.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 10.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 10.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 10.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 9.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 9.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 9.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 9.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 8.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 8.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 8.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 8.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 8.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 8.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 8.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 7.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 7.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 7.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 7.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 6.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 6.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 6.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 6.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 5.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 5.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 5.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 5.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 4.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.7
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Brain - Putamen (basal ganglia)
Average nTPM: 14.0
Samples: 205

Max nTPM: 39.3
Min nTPM: 2.4
Std nTPM: 7.2
Median nTPM: 12.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 39.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 30.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 30.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 29.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 29.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 29.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 28.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 28.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 28.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 27.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 27.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 27.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 25.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 25.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 25.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 25.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 24.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 24.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 24.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 24.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 23.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 23.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 23.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 23.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 23.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 23.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 22.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 22.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 22.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 22.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 22.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 22.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 21.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 21.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 20.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 20.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 20.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 20.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 20.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 20.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 20.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 20.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 20.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 19.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 19.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 19.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 19.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 19.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 19.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 19.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 18.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 18.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 18.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 18.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 17.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 17.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 17.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 17.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 17.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 17.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 17.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 17.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 16.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 16.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 16.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 16.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 16.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 16.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 16.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 16.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 15.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 15.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 15.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 15.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 15.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 14.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 14.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 14.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 14.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 14.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 14.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 14.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 14.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 14.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 14.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 14.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 13.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 13.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 13.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 13.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 13.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 13.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 13.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 13.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 13.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 12.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 12.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 12.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 12.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 12.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 11.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 11.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 11.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 11.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 11.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 11.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 11.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 11.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 11.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 10.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 10.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 10.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 10.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 10.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 10.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 10.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 10.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 10.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 9.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 9.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 9.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 9.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 9.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 9.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 8.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 8.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 8.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 8.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 8.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 8.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 7.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 7.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 7.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 7.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 7.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 7.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 7.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 7.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 7.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 6.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 6.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 6.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 6.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 6.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 6.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 5.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 5.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 5.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 5.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 5.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 5.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 5.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 5.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 5.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 5.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 5.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 4.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 4.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 4.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 4.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 3.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 3.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 3.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

131.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 131.2
FF:10164-103B2 76 years, female 131.2
Nucleus accumbens
Scaled Tags Per Million: 96.0
FF:10037-101F1 23-56 years, mixed 96.0
Putamen
Scaled Tags Per Million: 109.4
FF:10176-103C5 60 years, female 109.4
Globus pallidus
Scaled Tags Per Million: 29.6
FF:10175-103C4 60 years, female 37.6
FF:10161-103A8 76 years, female 21.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.9
Pig sample Sample description nTPM
Caudate
nTPM: 45.9
Samples: 4

Max nTPM: 51.5
Min nTPM: 39.7
Sample A Female 39.7
Sample B Female 48.1
Sample C Male 51.5
Sample D Male 44.2
Putamen
nTPM: 38.0
Samples: 4

Max nTPM: 45.2
Min nTPM: 20.5
Sample A Female 20.5
Sample B Female 43.6
Sample C Male 45.2
Sample D Male 42.7
Septum
nTPM: 36.7
Samples: 4

Max nTPM: 40.5
Min nTPM: 28.4
Sample A Female 40.5
Sample B Female 39.3
Sample C Male 38.6
Sample D Male 28.4
Ventral pallidum
nTPM: 36.6
Samples: 4

Max nTPM: 43.5
Min nTPM: 30.7
Sample A Female 43.5
Sample B Female 34.7
Sample C Male 30.7
Sample D Male 37.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 41.0
Samples: 4

Max nTPM: 43.2
Min nTPM: 40.0
Sample A Male 40.8
Sample B Male 40.0
Sample C Female 43.2
Sample D Female 40.1
Septum
nTPM: 46.3
Samples: 4

Max nTPM: 51.0
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 50.4
Sample C Female 46.6
Sample D Female 51.0
Ventral forebrain
nTPM: 41.8
Samples: 4

Max nTPM: 45.7
Min nTPM: 40.3
Sample A Male 40.8
Sample B Male 40.3
Sample C Female 40.3
Sample D Female 45.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.0
72472784 Antisense, RP_051101_02_E02, Mouse strain C57BL/6J (56 days, male) 3.3
69626624 Antisense, RP_050428_01_A06, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 1.6
69626624 Antisense, RP_050428_01_A06, Mouse strain C57BL/6J (56 days, male) 1.7
72472784 Antisense, RP_051101_02_E02, Mouse strain C57BL/6J (56 days, male) 1.6

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