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ANXA4
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:225.9 nTPM
HPA:225.9 nTPM
GTEx:76.2 nTPM
FANTOM5:513.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007393Antibody CAB005076Antibody CAB017560
Glandular cells HighLowHigh




SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

225.9
overview
Male, age 65
Small intestine sample 232
nTPM: 202.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 278.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 175.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 247.1

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.2
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 76.2
Samples: 187

Max nTPM: 227.3
Min nTPM: 9.1
Std nTPM: 50.4
Median nTPM: 56.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 227.3
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 226.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 223.4
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 201.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 198.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 190.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 181.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 175.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 170.3
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 167.2
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 162.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 160.5
GTEX-1122O-1326-SM-5H11F 60-69 years, female 159.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 158.9
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 157.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 156.5
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 156.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 155.0
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 153.9
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 153.7
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 151.0
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 150.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 148.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 146.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 145.6
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 143.5
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 137.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 137.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 136.4
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 135.2
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 134.5
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 129.1
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 129.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 125.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 125.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 122.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 122.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 121.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 121.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 120.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 120.5
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 120.1
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 118.7
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 115.4
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 114.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 111.0
GTEX-14PN3-2026-SM-68729 60-69 years, female 110.9
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 110.4
GTEX-13113-1226-SM-5EGHT 60-69 years, female 110.3
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 108.4
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 107.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 107.0
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 105.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 105.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 105.1
GTEX-ZTSS-0926-SM-59865 40-49 years, male 104.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 104.7
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 101.7
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 100.3
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 98.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 97.0
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 96.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 93.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 90.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 89.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 86.2
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 85.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 85.7
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 83.0
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 83.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 81.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 80.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 78.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 78.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 76.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 76.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 76.3
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 75.6
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 75.6
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 74.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 73.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 73.1
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 70.8
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 70.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 69.1
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 66.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 65.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 65.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 61.5
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 60.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 59.7
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 59.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 57.2
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 56.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 52.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 52.6
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 52.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 52.5
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 51.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 51.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 51.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 50.5
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 49.4
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 48.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 48.2
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 47.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 46.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 46.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 46.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 46.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 46.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 45.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 45.4
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 45.3
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 45.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 44.4
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 44.1
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 43.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 42.4
GTEX-1C475-1426-SM-793CH 40-49 years, female 41.8
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 41.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 40.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 40.8
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 40.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 40.5
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 40.4
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 40.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 39.5
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 39.4
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 39.3
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 39.2
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 38.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 37.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 37.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 37.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 37.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 36.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 36.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 36.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 35.8
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 35.5
GTEX-117YX-0326-SM-5GICL 50-59 years, male 34.4
GTEX-1192X-2526-SM-59868 50-59 years, male 34.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 34.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 33.2
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 33.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 32.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 32.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 32.3
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 32.1
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 31.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 31.5
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 31.4
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 31.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 31.2
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 31.1
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 31.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 31.0
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 30.9
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 30.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 30.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 29.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 29.1
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 29.0
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 28.2
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 27.8
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 27.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 26.7
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 26.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 25.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 25.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 24.2
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 24.0
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 23.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 22.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 22.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 21.1
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 21.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 20.4
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 19.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 19.6
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 19.3
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 19.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 18.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 18.3
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 15.8
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 9.1
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

513.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 513.7
FF:10024-101D6 15,40,85 years, mixed 513.7

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