We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
GUCA2A
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • GUCA2A
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: Not detected
Enterocytes: Not detected
Enterocytes - Microvilli: Not detected
Goblet cells: Not detected
Paneth cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:901.4 nTPM
HPA:901.3 nTPM
GTEx:901.4 nTPM
FANTOM5:1915.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018215
Endocrine cells Not detected
Enterocytes Not detected
Enterocytes - Microvilli Not detected
Goblet cells Not detected
Paneth cells High


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

901.3
overview
Male, age 65
Small intestine sample 232
nTPM: 124
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 2061.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 795
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 624.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

901.4
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 901.4
Samples: 187

Max nTPM: 6178.7
Min nTPM: 0.0
Std nTPM: 1189.8
Median nTPM: 313.6
GTEX-111YS-1426-SM-5GID8 60-69 years, male 6178.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 5184.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 4470.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 4230.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 4158.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 3708.2
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 3690.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 3650.0
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 3381.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 3372.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 3177.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 3167.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 3138.2
GTEX-1122O-1326-SM-5H11F 60-69 years, female 3105.4
GTEX-14PN3-2026-SM-68729 60-69 years, female 2946.8
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 2934.2
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 2888.6
GTEX-ZTSS-0926-SM-59865 40-49 years, male 2853.2
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 2767.5
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 2749.1
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 2652.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 2525.1
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 2461.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 2457.5
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 2348.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 2301.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 2238.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 2173.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 2164.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 2121.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 2083.2
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 1993.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1943.8
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1913.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1872.4
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1834.4
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1802.7
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1748.0
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1730.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1726.8
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1684.2
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1635.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1634.1
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1624.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1622.3
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1590.5
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1507.2
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1491.5
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1433.9
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1389.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1343.6
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1308.9
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1255.7
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1137.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1109.4
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1090.7
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1084.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1008.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 992.1
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 981.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 952.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 942.4
GTEX-14PK6-1626-SM-6871I 70-79 years, female 937.6
GTEX-13113-1226-SM-5EGHT 60-69 years, female 918.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 896.3
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 869.8
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 868.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 849.1
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 818.7
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 790.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 777.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 772.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 771.7
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 749.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 694.2
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 676.8
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 652.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 649.3
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 635.9
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 635.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 628.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 574.2
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 571.6
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 511.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 487.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 477.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 474.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 455.8
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 439.1
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 423.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 383.7
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 375.2
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 343.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 313.6
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 306.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 299.6
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 282.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 276.5
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 263.0
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 258.9
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 251.0
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 191.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 186.5
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 181.0
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 174.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 171.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 164.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 121.5
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 118.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 116.4
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 108.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 98.5
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 95.8
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 91.4
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 88.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 85.6
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 84.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 80.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 80.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 79.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 66.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 65.3
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 63.9
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 55.6
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 53.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 52.5
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 48.9
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 48.9
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 42.7
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 42.0
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 41.1
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 39.0
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 36.7
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 35.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 30.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 28.9
GTEX-117YX-0326-SM-5GICL 50-59 years, male 28.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 25.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 25.3
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 23.5
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 23.5
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 21.5
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 21.3
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 20.0
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 18.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 17.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 14.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 13.8
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 13.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 13.4
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 12.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 11.3
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 11.1
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 9.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 9.9
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 9.4
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 9.1
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 8.6
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 8.2
GTEX-183FY-1626-SM-793D8 20-29 years, male 7.7
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 7.0
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 6.9
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 6.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 6.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 6.3
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 5.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 4.9
GTEX-1192X-2526-SM-59868 50-59 years, male 4.8
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 4.8
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 4.4
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 4.3
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 4.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3.0
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2.4
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 2.3
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 2.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2.1
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 2.1
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1.7
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1.6
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1.4
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 0.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 0.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 0.4
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 0.0
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 0.0
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1915.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 1915.9
FF:10024-101D6 15,40,85 years, mixed 1915.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org