HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.7 nTPM
HPA Brain:15.1 nTPM
GTEx:10.7 nTPM
FANTOM5:20.7 Scaled Tags Per Million
Pig:9.4 nTPM
Mouse:6.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044356
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.7
2529 Female, age 94, left hemisphere 14.4
1911 Female, age 85, right hemisphere 12.1
2621 Female, age 67, right hemisphere 10.0
2148 Female, age 91, left hemisphere 9.8
1855 Male, age 76, left hemisphere 9.1
1898 Male, age 80, left hemisphere 9.1
Dentate gyrus
nTPM: 11.8
2010 Male, age 76, both hemispheres 19.1
2528 Male, age 74, both hemispheres 13.2
2530 Female, age 94, left hemisphere 12.0
2246 Female, age 85, both hemispheres 10.7
2531 Female, age 67, both hemispheres 8.5
1927 Female, age 91, both hemispheres 7.1
Entorhinal gyrus
nTPM: 11.5
2117 Female, age 91, right hemisphere 16.5
2764 Male, age 80, right hemisphere 13.1
2686 Male, age 75, right hemisphere 11.4
1787 Male, age 76, left hemisphere 10.6
2613 Female, age 94, left hemisphere 9.5
1938 Female, age 85, left hemisphere 7.8
Hippocampus, CA1
nTPM: 10.0
2045 Male, age 76, both hemispheres 12.6
2082 Female, age 91, right hemisphere 12.3
2527 Male, age 74, both hemispheres 10.7
1873 Female, age 85, both hemispheres 9.0
2749 Male, age 80, left hemisphere 5.4
Hippocampus, CA2
nTPM: 11.1
1940 Female, age 85, left hemisphere 13.6
2437 Female, age 94, left hemisphere 12.7
2113 Female, age 91, right hemisphere 11.6
1963 Male, age 80, left hemisphere 10.8
2249 Male, age 74, both hemispheres 10.6
1892 Male, age 76, both hemispheres 7.2
Hippocampus, CA3
nTPM: 10.5
1867 Male, age 76, both hemispheres 14.3
2436 Male, age 74, both hemispheres 13.7
1891 Female, age 85, both hemispheres 13.4
2861 Female, age 67, both hemispheres 8.2
2620 Female, age 94, left hemisphere 7.5
2137 Male, age 80, left hemisphere 6.1
Parahippocampal cortex
nTPM: 11.4
2018 Male, age 76, both hemispheres 20.5
2692 Male, age 74, both hemispheres 13.1
2622 Female, age 67, right hemisphere 12.5
2532 Female, age 72, left hemisphere 12.2
1990 Female, age 91, right hemisphere 10.6
2693 Female, age 94, both hemispheres 9.8
2245 Female, age 91, both hemispheres 9.4
1933 Female, age 85, both hemispheres 8.8
1850 Male, age 80, both hemispheres 8.6
2250 Female, age 67, right hemisphere 8.2
Perirhinal gyrus
nTPM: 8.1
2848 Male, age 76, right hemisphere 9.7
1794 Male, age 80, right hemisphere 9.2
2521 Female, age 94, right hemisphere 7.9
1847 Female, age 91, left hemisphere 7.2
1841 Female, age 85, right hemisphere 6.7
Subiculum
nTPM: 15.1
2042 Male, age 76, both hemispheres 23.2
2619 Male, age 74, both hemispheres 15.2
1901 Male, age 80, both hemispheres 14.3
2438 Female, age 94, left hemisphere 13.9
2729 Female, age 91, right hemisphere 13.0
1977 Female, age 85, both hemispheres 10.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.7
Samples: 197

Max nTPM: 31.7
Min nTPM: 2.4
Std nTPM: 4.5
Median nTPM: 10.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 25.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 25.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 20.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 19.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 18.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 18.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 18.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.7
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.4
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.6
Sample A Female 10.9
Sample B Female 7.6
Sample C Male 9.6
Sample D Male 8.0
Dorsal hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.1
Sample A Female 10.6
Sample B Female 8.5
Sample C Male 10.4
Sample D Male 8.1
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.3
Sample A Female 9.4
Sample B Female 7.3
Sample C Male 9.7
Sample D Male 8.1
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 11.3
Min nTPM: 7.4
Sample A Female 8.5
Sample B Female 7.4
Sample C Male 11.3
Sample D Male 9.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.7
Sample A Male 6.9
Sample B Male 6.3
Sample C Female 5.7
Sample D Female 6.4
Hippocampal formation
nTPM: 5.5
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.1
Sample A Male 5.2
Sample B Male 5.3
Sample C Female 5.1
Sample D Female 6.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71378582 Antisense, RP_050517_01_E01, Mouse strain C57BL/6J (56 days, male) 0.3

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