PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:544.7 nTPM
FANTOM5:449.6 Scaled Tags Per Million
Pig:378.9 nTPM
Mouse:810.2 nTPM
Allen mouse:13.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 544.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 238.6
1984 Male, age 76, both hemispheres 295.2
2301 Female, age 85, both hemispheres 268.5
2188 Female, age 91, both hemispheres 211.7
2090 Male, age 80, both hemispheres 179.0
Area postrema
nTPM: 146.6
2054 Male, age 76, both hemispheres 202.5
2306 Male, age 80, both hemispheres 124.0
2799 Male, age 61, both hemispheres 113.4
Dorsal cochlear nucleus
nTPM: 239.4
2058 Male, age 76, both hemispheres 289.6
2370 Male, age 61, both hemispheres 260.8
2802 Male, age 74, right hemisphere 223.3
2187 Female, age 91, both hemispheres 222.0
2378 Male, age 80, both hemispheres 201.4
Dorsal medullary reticular nucleus
nTPM: 273.2
2040 Female, age 85, both hemispheres 302.5
2088 Male, age 76, both hemispheres 261.8
2373 Male, age 61, both hemispheres 255.5
Dorsal motor vagal complex
nTPM: 254.1
2133 Female, age 91, both hemispheres 327.5
2844 Male, age 55, unknown 289.6
2000 Male, age 74, unknown 267.3
2643 Male, age 74, both hemispheres 260.2
2797 Male, age 61, both hemispheres 245.2
2813 Female, age 72, unknown 221.7
2185 Male, age 76, both hemispheres 212.8
2807 Female, age 85, both hemispheres 208.7
Dorsal tegmental nucleus
nTPM: 230.6
1936 Male, age 76, left hemisphere 262.4
2083 Male, age 80, both hemispheres 261.6
2358 Male, age 61, both hemispheres 224.6
2326 Male, age 74, both hemispheres 173.8
Dorsolateral tegmental area
nTPM: 196.6
2141 Male, age 76, both hemispheres 278.4
2654 Male, age 80, both hemispheres 230.2
2751 Female, age 85, both hemispheres 213.1
2360 Male, age 74, both hemispheres 153.2
2337 Male, age 61, both hemispheres 108.2
Gigantocellular reticular nuclei, medullary
nTPM: 346.0
2462 Male, age 74, both hemispheres 673.9
2310 Male, age 80, both hemispheres 394.3
2387 Female, age 91, both hemispheres 317.9
2022 Male, age 76, right hemisphere 290.0
1876 Female, age 85, both hemispheres 220.2
2314 Male, age 61, both hemispheres 179.7
Gigantocellular reticular nuclei, pars
nTPM: 357.5
2168 Male, age 76, both hemispheres 527.6
2330 Male, age 80, both hemispheres 344.3
2706 Male, age 80, both hemispheres 324.8
2084 Female, age 85, both hemispheres 313.5
2336 Male, age 61, both hemispheres 277.4
Inferior olive
nTPM: 188.3
2628 Female, age 91, both hemispheres 275.7
2085 Female, age 85, both hemispheres 254.7
2379 Male, age 80, both hemispheres 145.6
2178 Male, age 61, both hemispheres 135.3
2563 Male, age 74, both hemispheres 130.2
Kolliker-Fuse nucleus
nTPM: 281.0
2793 Female, age 91, left hemisphere 330.1
2163 Male, age 80, both hemispheres 303.4
2315 Male, age 76, right hemisphere 209.5
Lateral lemniscal nuclei
nTPM: 448.1
2453 Male, age 74, right hemisphere 560.5
2169 Male, age 76, both hemispheres 497.6
2036 Male, age 80, both hemispheres 426.0
2320 Female, age 91, left hemisphere 390.9
2746 Female, age 85, left hemisphere 365.3
Lateral medullary reticular nucleus
nTPM: 225.5
2044 Male, age 76, both hemispheres 386.6
2804 Female, age 91, both hemispheres 286.7
2190 Female, age 85, both hemispheres 214.3
2374 Male, age 61, both hemispheres 200.1
2852 Male, age 80, both hemispheres 148.5
2305 Male, age 74, both hemispheres 116.9
Lateral parabrachial nucleus
nTPM: 265.2
2139 Female, age 85, right hemisphere 408.4
2790 Male, age 61, both hemispheres 280.2
2013 Male, age 80, both hemispheres 250.7
2792 Male, age 76, both hemispheres 121.5
Lateral vestibular nucleus
nTPM: 277.6
2184 Male, age 76, both hemispheres 336.4
2311 Male, age 80, both hemispheres 218.9
Locus coeruleus
nTPM: 296.8
2123 Female, age 91, both hemispheres 339.7
2317 Female, age 72, unknown 317.0
2720 Male, age 74, both hemispheres 307.7
2162 Male, age 80, both hemispheres 299.2
1980 Male, age 76, both hemispheres 293.6
2014 Male, age 55, unknown 286.1
2788 Male, age 74, unknown 234.5
Medial olivary nucleus
nTPM: 121.5
2851 Male, age 80, both hemispheres 186.9
2138 Female, age 91, both hemispheres 119.2
1962 Male, age 76, both hemispheres 112.9
1943 Male, age 61, both hemispheres 67.0
Medial parabrachial nucleus
nTPM: 252.1
2156 Male, age 61, both hemispheres 303.3
2854 Male, age 80, both hemispheres 282.7
2786 Male, age 76, both hemispheres 246.1
2463 Female, age 85, right hemisphere 230.2
2170 Female, age 91, both hemispheres 198.0
Medial periolivary nuclei
nTPM: 430.1
2171 Female, age 85, both hemispheres 582.6
2063 Male, age 76, both hemispheres 569.5
2791 Male, age 74, right hemisphere 386.4
2458 Female, age 91, both hemispheres 350.5
2081 Male, age 80, both hemispheres 261.4
Medial vestibular nucleus
nTPM: 293.2
2134 Male, age 76, both hemispheres 339.7
2624 Male, age 61, both hemispheres 339.4
2743 Female, age 85, both hemispheres 306.9
2093 Male, age 80, both hemispheres 292.4
2803 Female, age 91, both hemispheres 244.3
2801 Male, age 74, both hemispheres 236.1
Motor facial nucleus
nTPM: 459.7
2062 Male, age 76, both hemispheres 623.2
2327 Male, age 80, both hemispheres 551.8
2795 Female, age 91, both hemispheres 523.0
2365 Male, age 74, right hemisphere 427.6
2697 Female, age 85, both hemispheres 357.8
2126 Male, age 61, both hemispheres 274.7
Motor hypoglossal nucleus
nTPM: 284.3
2125 Female, age 91, both hemispheres 312.6
2461 Male, age 61, both hemispheres 306.6
2132 Female, age 85, both hemispheres 301.4
2182 Male, age 80, both hemispheres 252.5
2277 Male, age 76, both hemispheres 248.2
Motor trigeminal nucleus
nTPM: 345.6
2560 Male, age 74, both hemispheres 466.9
2079 Male, age 80, both hemispheres 416.4
2321 Female, age 91, both hemispheres 290.8
2335 Male, age 61, both hemispheres 289.9
2309 Male, age 76, both hemispheres 264.2
Nuclei of the trapezoid body
nTPM: 544.7
2735 Female, age 85, both hemispheres 654.4
2159 Male, age 61, both hemispheres 603.5
1983 Male, age 76, both hemispheres 557.8
2368 Female, age 91, both hemispheres 499.7
2166 Male, age 80, both hemispheres 408.1
Nucleus ambiguus
nTPM: 327.0
2096 Female, age 85, both hemispheres 507.9
2071 Male, age 76, both hemispheres 146.1
Nucleus cuneatus
nTPM: 243.9
2131 Male, age 76, both hemispheres 379.3
2100 Male, age 76, both hemispheres 291.8
2564 Male, age 74, both hemispheres 289.8
2562 Male, age 61, both hemispheres 276.4
2376 Male, age 61, both hemispheres 245.3
2805 Female, age 91, both hemispheres 220.5
2381 Male, age 80, both hemispheres 205.6
2808 Female, age 85, both hemispheres 162.0
2380 Male, age 80, both hemispheres 124.1
Nucleus gracilis
nTPM: 149.3
2299 Female, age 85, both hemispheres 167.4
2627 Male, age 74, both hemispheres 152.8
2382 Male, age 80, both hemispheres 127.6
Nucleus raphe magnus
nTPM: 530.9
2172 Female, age 85, both hemispheres 670.9
2160 Male, age 61, both hemispheres 642.6
2455 Male, age 74, both hemispheres 560.2
2328 Male, age 80, both hemispheres 482.9
2051 Male, age 76, both hemispheres 420.9
2459 Female, age 91, both hemispheres 407.9
Nucleus raphe obscurus
nTPM: 161.3
2800 Male, age 61, midline 219.8
2845 Female, age 85, midline 192.4
2142 Male, age 76, midline 71.7
Nucleus raphe pallidus
nTPM: 174.5
2183 Male, age 80, midline 249.0
1924 Male, age 61, midline 175.0
2145 Male, age 76, midline 99.5
Nucleus tractus solitarii
nTPM: 250.7
2656 Male, age 76, both hemispheres 297.4
2307 Male, age 80, both hemispheres 264.4
2191 Female, age 85, both hemispheres 235.5
2144 Female, age 91, right hemisphere 205.4
Paramedian reticular nucleus
nTPM: 292.8
2050 Female, age 85, both hemispheres 393.4
2313 Male, age 61, both hemispheres 338.4
2057 Male, age 80, both hemispheres 278.2
2052 Male, age 76, both hemispheres 161.2
Parvicellular reticular nuclei
nTPM: 369.0
2558 Male, age 74, both hemispheres 609.2
2095 Male, age 76, both hemispheres 279.3
2119 Male, age 80, both hemispheres 218.3
Parvicellular reticular nuclei, medullary
nTPM: 298.2
2181 Male, age 80, left hemisphere 316.6
2091 Female, age 85, both hemispheres 295.6
2189 Female, age 91, both hemispheres 282.5
Pedunculopontine tegmental nucleus
nTPM: 233.4
1921 Female, age 85, both hemispheres 285.5
2334 Male, age 80, both hemispheres 220.1
2338 Male, age 61, both hemispheres 194.7
Peritrigeminal nucleus
nTPM: 309.9
2179 Male, age 61, both hemispheres 334.4
2067 Female, age 85, both hemispheres 302.0
2136 Male, age 76, both hemispheres 293.4
Pontine nuclei
nTPM: 435.9
2787 Female, age 85, both hemispheres 655.0
1968 Male, age 76, left hemisphere 545.5
2727 Male, age 61, right hemisphere 540.9
1863 Male, age 55, unknown 482.0
2109 Female, age 72, unknown 392.0
2115 Male, age 80, left hemisphere 329.5
2454 Male, age 74, left hemisphere 312.6
2319 Female, age 91, both hemispheres 229.8
Pontine raphe nucleus
nTPM: 380.8
2122 Female, age 85, midline 449.2
2853 Male, age 76, midline 312.4
Posteroventral cochlear nucleus
nTPM: 203.7
2752 Female, age 85, both hemispheres 349.8
2070 Male, age 76, both hemispheres 260.4
2371 Male, age 61, both hemispheres 242.0
2341 Male, age 80, both hemispheres 119.8
2135 Female, age 91, both hemispheres 46.4
Prepositus hypoglossal nucleus
nTPM: 263.0
2086 Male, age 80, both hemispheres 269.5
2855 Female, age 85, right hemisphere 256.5
Principal sensory trigeminal nucleus
nTPM: 416.5
2158 Male, age 61, both hemispheres 616.3
2008 Male, age 80, left hemisphere 451.4
2324 Male, age 76, both hemispheres 301.8
2367 Female, age 91, left hemisphere 296.4
Reticular pontine nucleus, caudal
nTPM: 386.7
2332 Male, age 80, right hemisphere 589.8
2092 Male, age 76, both hemispheres 382.3
2457 Female, age 91, both hemispheres 376.2
2559 Male, age 74, both hemispheres 198.4
Reticular pontine nucleus, oral
nTPM: 300.8
2361 Male, age 74, both hemispheres 383.2
2012 Female, age 85, both hemispheres 336.1
2366 Female, age 91, both hemispheres 285.7
2167 Male, age 76, both hemispheres 270.9
1939 Male, age 80, both hemispheres 228.0
Reticulotegmental nucleus
nTPM: 345.9
2325 Male, age 76, both hemispheres 396.7
2452 Male, age 74, both hemispheres 365.3
2333 Male, age 80, both hemispheres 336.7
2322 Female, age 91, both hemispheres 284.8
Spinal trigeminal nucleus, caudal
nTPM: 298.5
2447 Male, age 76, both hemispheres 382.2
2390 Female, age 91, both hemispheres 350.4
2642 Male, age 74, both hemispheres 272.1
2308 Male, age 80, both hemispheres 255.0
2312 Male, age 61, both hemispheres 232.6
Spinal trigeminal nucleus, interpolar
nTPM: 377.5
2066 Male, age 76, right hemisphere 491.8
2625 Male, age 61, both hemispheres 427.4
2389 Female, age 91, both hemispheres 389.1
2386 Female, age 85, both hemispheres 296.3
2033 Male, age 80, both hemispheres 282.8
Spinal trigeminal nucleus, oral
nTPM: 298.4
2164 Male, age 80, both hemispheres 308.0
2737 Female, age 85, both hemispheres 300.2
1978 Male, age 76, both hemispheres 286.9
Spinal vestibular nucleus
nTPM: 263.2
2780 Male, age 80, both hemispheres 299.4
2186 Female, age 91, both hemispheres 285.9
2796 Male, age 61, both hemispheres 278.9
2748 Male, age 76, both hemispheres 252.7
2806 Female, age 85, both hemispheres 239.9
2384 Male, age 74, both hemispheres 222.4
Subcoeruleus area
nTPM: 292.5
2089 Male, age 76, left hemisphere 396.7
1958 Male, age 80, both hemispheres 325.4
2323 Female, age 91, left hemisphere 309.9
2451 Male, age 74, both hemispheres 273.3
2369 Female, age 85, left hemisphere 156.9
Superior olive
nTPM: 409.5
2561 Female, age 91, both hemispheres 462.6
1875 Female, age 85, both hemispheres 445.7
2329 Male, age 80, right hemisphere 437.2
2020 Male, age 76, both hemispheres 362.0
2364 Male, age 74, right hemisphere 340.0
Superior vestibular nucleus
nTPM: 199.7
2061 Male, age 76, both hemispheres 237.7
2015 Male, age 80, both hemispheres 233.6
2383 Male, age 74, both hemispheres 127.8
Ventral medullary reticular nucleus
nTPM: 242.9
2060 Male, age 76, both hemispheres 271.3
2372 Male, age 61, both hemispheres 214.6
Ventral periolivary nuclei
nTPM: 466.3
2130 Female, age 85, both hemispheres 555.3
2165 Male, age 80, both hemispheres 539.9
2794 Female, age 91, left hemisphere 453.7
2023 Male, age 76, both hemispheres 316.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 290.4
2741 Female, age 85, both hemispheres 359.7
1986 Male, age 76, both hemispheres 340.3
2302 Female, age 91, both hemispheres 329.9
2180 Male, age 61, both hemispheres 235.8
2118 Male, age 80, both hemispheres 186.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 359.9
2449 Male, age 74, both hemispheres 502.2
2161 Male, age 80, both hemispheres 402.8
1959 Male, age 76, both hemispheres 391.7
2456 Female, age 91, both hemispheres 368.3
2840 Female, age 85, both hemispheres 280.2
2359 Male, age 61, both hemispheres 214.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 449.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 449.6
FF:10182-103D2 60 years, female 654.3
FF:10165-103B3 76 years, female 244.8
Medulla oblongata
Scaled Tags Per Million: 197.8
FF:10038-101F2 18-64 years, mixed 238.7
FF:10174-103C3 60 years, female 196.1
FF:10155-103A2 76 years, female 158.7
Pons
Scaled Tags Per Million: 441.6
FF:10033-101E6 18-54 years, mixed 441.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 378.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 236.3
Samples: 4

Max nTPM: 288.2
Min nTPM: 138.6
Sample A Female 258.5
Sample B Female 259.8
Sample C Male 288.2
Sample D Male 138.6
Pons
nTPM: 378.9
Samples: 4

Max nTPM: 507.8
Min nTPM: 246.3
Sample A Female 507.8
Sample B Female 246.3
Sample C Male 336.0
Sample D Male 425.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 810.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 810.2
Samples: 4

Max nTPM: 881.5
Min nTPM: 739.1
Sample A Male 881.5
Sample B Male 739.1
Sample C Female 861.5
Sample D Female 758.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 13.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 13.7
1004 Antisense, RP_Baylor_103022, Mouse strain C57BL/6J (56 days, male) 13.7
Pons
Expression energy: 12.9
1004 Antisense, RP_Baylor_103022, Mouse strain C57BL/6J (56 days, male) 12.9

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