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STMN3
HPA
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  • STMN3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

STMN3
Synonyms SCLIP
Gene descriptioni

Full gene name according to HGNC.

Stathmin 3
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q13.33
Chromosome location (bp) 63639705 - 63657682
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000197457 (version 109)
Entrez gene 50861
HGNC HGNC:15926
UniProt Q9NZ72 (UniProt - Evidence at protein level)
neXtProt NX_Q9NZ72
GeneCards STMN3
Antibodypedia STMN3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Exhibits microtubule-destabilizing activity, which is antagonized by STAT3.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein which is a member of the stathmin protein family. Members of this protein family form a complex with tubulins at a ratio of 2 tubulins for each stathmin protein. Microtubules require the ordered assembly of alpha- and beta-tubulins, and formation of a complex with stathmin disrupts microtubule formation and function. A pseudogene of this gene is located on chromosome 22. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
STMN3-201
ENSP00000359070
ENST00000370053
Q9NZ72
[Direct mapping] Stathmin-3
Show all
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0001835 [blastocyst hatching]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0007019 [microtubule depolymerization]
GO:0007399 [nervous system development]
GO:0015631 [tubulin binding]
GO:0019904 [protein domain specific binding]
GO:0030424 [axon]
GO:0030426 [growth cone]
GO:0031110 [regulation of microtubule polymerization or depolymerization]
GO:0031122 [cytoplasmic microtubule organization]
GO:0031175 [neuron projection development]
GO:0035021 [negative regulation of Rac protein signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0043087 [regulation of GTPase activity]
GO:0051493 [regulation of cytoskeleton organization]
Show all
180 aa
21 kDa
No 0
STMN3-202
ENSP00000439840
ENST00000540534
Q9NZ72
[Direct mapping] Stathmin-3
Show all
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0007019 [microtubule depolymerization]
GO:0007399 [nervous system development]
GO:0015631 [tubulin binding]
GO:0019904 [protein domain specific binding]
GO:0030424 [axon]
GO:0030426 [growth cone]
GO:0031110 [regulation of microtubule polymerization or depolymerization]
GO:0031122 [cytoplasmic microtubule organization]
GO:0031175 [neuron projection development]
GO:0035021 [negative regulation of Rac protein signal transduction]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0043087 [regulation of GTPase activity]
GO:0051493 [regulation of cytoskeleton organization]
Show all
169 aa
19.8 kDa
No 0
STMN3-203
ENSP00000487795
ENST00000631920
A0A0J9YW36
[Direct mapping] Stathmin-3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005829 [cytosol]
GO:0015631 [tubulin binding]
GO:0031110 [regulation of microtubule polymerization or depolymerization]
GO:0031122 [cytoplasmic microtubule organization]
GO:0031175 [neuron projection development]
Show all
239 aa
27.3 kDa
No 0
STMN3-204
ENSP00000487639
ENST00000632676
A0A0J9YXY4
[Direct mapping] Stathmin
Show all
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005737 [cytoplasm]
GO:0015631 [tubulin binding]
GO:0031110 [regulation of microtubule polymerization or depolymerization]
GO:0031122 [cytoplasmic microtubule organization]
GO:0031175 [neuron projection development]
Show all
86 aa
9.8 kDa
No 0
STMN3-205
ENSP00000488604
ENST00000634126
A0A0J9YXY4
[Direct mapping] Stathmin
Show all
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005737 [cytoplasm]
GO:0015631 [tubulin binding]
GO:0031110 [regulation of microtubule polymerization or depolymerization]
GO:0031122 [cytoplasmic microtubule organization]
GO:0031175 [neuron projection development]
Show all
86 aa
9.8 kDa
No 0

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