Expression of PSAP in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PSAP is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 709.4

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

651.2

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	3276.8
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	2589.7
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	2409.0
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	2164.0
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	2111.4
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	1841.9
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	1672.1
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	1594.0
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	1441.3
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	1362.9
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	1312.3
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	1312.0
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	1294.9
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	1293.2
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	1276.9
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1264.6
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	1254.6
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	1228.7
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	1194.5
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	1187.0
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	1173.8
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	1129.3
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	1111.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	1102.6
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	1094.6
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	1086.4
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	1057.2
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	1048.1
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	1036.6
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	1007.2
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	1003.8
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	999.1
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	988.8
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	985.7
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	983.0
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	978.9
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	966.5
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	957.6
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	953.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	950.4
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	946.8
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	941.0
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	928.3
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	917.3
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	915.4
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	914.9
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	910.8
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	909.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	904.9
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	892.6
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	890.4
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	887.9
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	884.6
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	877.0
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	877.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	867.3
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	847.8
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	845.1
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	838.0
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	834.0
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	828.3
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	823.6
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	823.5
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	819.7
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	818.8
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	818.5
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	817.1
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	812.0
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	809.3
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	809.1
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	809.1
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	803.7
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	798.5
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	796.6
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	795.8
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	795.1
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	792.5
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	790.8
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	790.7
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	789.7
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	787.1
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	784.6
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	782.8
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	780.1
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	777.3
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	774.0
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	773.7
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	771.0
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	769.0
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	761.8
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	757.7
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	756.4
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	752.9
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	747.9
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	746.4
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	745.2
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	742.5
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	737.9
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	737.4
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	733.7
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	732.4
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	728.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	725.6
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	722.4
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	721.6
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	715.5
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	713.0
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	711.6
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	710.8
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	709.4
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	709.3
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	707.2
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	707.1
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	704.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	701.8
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	701.6
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	701.2
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	693.7
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	693.1
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	691.5
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	691.3
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	691.1
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	688.5
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	685.4
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	684.6
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	684.4
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	683.7
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	682.7
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	681.4
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	681.3
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	678.1
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	677.9
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	677.3
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	675.0
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	673.8
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	672.6
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	671.6
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	664.2
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	659.1
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	659.0
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	655.5
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	651.9
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	651.8
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	648.5
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	644.2
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	643.0
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	642.5
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	640.2
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	637.0
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	636.2
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	634.5
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	634.4
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	634.1
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	632.7
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	630.6
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	630.6
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	630.0
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	628.7
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	626.1
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	624.7
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	624.5
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	623.5
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	623.1
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	622.0
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	620.0
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	618.5
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	614.3
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	614.0
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	613.5
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	613.2
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	612.4
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	612.3
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	607.3
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	605.9
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	605.8
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	604.9
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	604.8
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	602.8
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	600.0
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	599.0
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	597.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	593.9
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	592.4
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	591.5
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	590.3
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	589.0
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	585.8
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	585.6
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	584.7
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	583.5
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	582.9
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	582.8
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	582.1
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	576.5
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	576.2
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	575.9
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	575.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	573.1
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	573.0
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	568.5
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	565.5
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	559.3
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	558.7
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	558.3
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	557.9
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	556.5
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	556.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	554.3
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	553.0
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	550.2
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	549.7
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	548.0
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	547.8
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	547.4
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	544.2
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	543.8
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	542.2
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	539.3
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	537.3
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	537.2
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	537.0
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	533.4
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	529.6
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	529.0
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	524.6
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	524.1
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	523.2
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	521.7
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	521.2
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	520.8
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	520.7
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	516.3
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	514.7
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	513.2
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	510.1
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	505.7
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	505.1
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	504.6
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	503.5
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	502.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	502.5
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	499.2
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	499.0
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	498.5
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	497.0
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	493.6
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	492.3
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	492.3
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	491.9
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	490.6
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	487.0
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	486.9
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	486.1
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	485.6
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	485.4
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	483.8
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	483.0
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	480.6
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	480.1
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	477.3
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	476.9
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	476.8
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	465.9
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	465.0
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	463.7
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	462.0
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	461.9
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	461.7
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	459.3
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	458.6
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	456.8
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	456.2
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	453.4
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	448.7
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	444.5
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	444.0
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	439.4
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	439.3
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	438.4
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	437.6
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	435.3
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	431.3
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	431.2
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	430.7
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	428.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	427.1
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	426.7
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	425.7
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	424.8
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	416.9
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	415.6
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	415.4
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	415.4
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	415.0
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	413.6
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	412.0
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	411.7
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	411.3
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	406.4
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	405.6
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	403.4
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	400.1
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	399.6
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	396.1
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	392.4
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	392.3
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	391.6
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	386.1
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	379.1
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	378.3
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	376.9
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	376.0
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	374.8
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	374.5
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	373.9
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	369.6
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	367.6
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	364.7
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	362.3
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	360.8
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	360.3
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	355.7
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	354.9
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	354.0
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	349.8
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	349.6
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	347.5
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	346.4
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	341.6
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	339.2
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	333.2
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	329.3
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	326.0
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	318.9
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	318.8
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	315.8
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	312.1
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	306.8
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	306.5
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	292.5
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	292.1
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	290.2
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	287.3
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	286.2
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	286.0
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	285.6
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	276.5
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	276.4
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	272.3
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	270.9
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	270.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	260.7
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	258.7
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	256.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	251.7
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	239.9
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	222.4
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	212.2
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	207.9
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	207.2
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	183.7
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	105.6
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

PSAP is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 503.65

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

895.1

Number of samples

231

Samples

Sample	Description	pTPM
DO50829	78 years, male, NA, stage:3, alive, 570 days	6337.0
DO23523	52 years, male, NA, stage:3, alive, 1080 days	6043.7
DO48720	62 years, female, NA, stage:2, alive, 570 days	3669.4
DO45275	65 years, male, NA, stage:3, dead, 10 days	3358.6
DO23535	67 years, male, NA, stage:1, alive, 960 days	2943.0
DO50778	60 years, male, NA, stage:4, alive, 630 days	2791.2
DO45139	63 years, male, NA, stage:3, alive, 1320 days	2173.6
DO45283	60 years, male, NA, stage:3, alive, 510 days	2146.7
DO45155	69 years, male, NA, stage:2, alive, 2160 days	2120.6
DO23547	74 years, male, NA, stage:1, alive, 1020 days	2102.4
DO45092	62 years, male, NA, stage:4, dead, 1200 days	2014.6
DO45277	64 years, male, NA, stage:3, alive, 600 days	1889.2
DO45287	74 years, male, NA, stage:1, alive, 390 days	1875.1
DO50819	72 years, female, NA, stage:2, alive, 510 days	1832.1
DO23530	53 years, male, NA, stage:4, dead, 180 days	1724.0
DO45127	73 years, male, NA, stage:3, dead, 420 days	1681.3
DO48747	62 years, male, NA, stage:3, alive, 540 days	1654.8
DO45303	62 years, female, NA, stage:3, alive, 990 days	1634.5
DO50787	63 years, male, NA, stage:3, alive, 480 days	1563.5
DO23524	71 years, female, NA, stage:2, alive, 1050 days	1538.6
DO45225	69 years, male, NA, stage:1, alive, 1050 days	1524.7
DO45141	73 years, male, NA, stage:2, alive, 1320 days	1493.2
DO48730	73 years, female, NA, stage:2, alive, 630 days	1481.0
DO45135	77 years, male, NA, stage:1, alive, 1410 days	1474.5
DO45223	67 years, male, NA, stage:4, alive, 1020 days	1469.3
DO45115	81 years, male, NA, stage:2, alive, 840 days	1444.6
DO45159	65 years, male, NA, stage:3, alive, 1470 days	1437.0
DO45171	56 years, male, NA, stage:3, alive, 600 days	1434.6
DO45259	65 years, male, NA, stage:3, alive, 330 days	1431.7
DO45157	62 years, male, NA, stage:2, alive, 1980 days	1396.8
DO48732	73 years, male, NA, stage:3, alive, 630 days	1366.6
DO45119	74 years, male, NA, stage:3, dead, 510 days	1335.3
DO23508	79 years, female, NA, stage:2, alive, 390 days	1326.6
DO45197	51 years, male, NA, stage:2, alive, 1170 days	1316.4
DO45165	75 years, male, NA, stage:2, alive, 690 days	1280.0
DO45189	85 years, female, NA, stage:2, alive, 1200 days	1246.1
DO50800	74 years, male, NA, stage:2, alive, 510 days	1240.3
DO23542	66 years, male, NA, stage:3, alive, 960 days	1216.2
DO45305	66 years, male, NA, stage:4, alive, 300 days	1184.8
DO48728	74 years, female, NA, stage:2, alive, 150 days	1173.0
DO45249	57 years, male, NA, stage:1, alive, 630 days	1155.9
DO45245	75 years, female, NA, stage:2, dead, 240 days	1142.4
DO45153	77 years, female, NA, stage:2, alive, 1380 days	1141.5
DO45261	74 years, male, NA, stage:3, alive, 990 days	1139.9
DO23519	65 years, male, NA, stage:3, alive, 630 days	1129.9
DO48679	72 years, male, NA, stage:2, alive, 1200 days	1124.8
DO45131	53 years, male, NA, stage:4, dead, 360 days	1108.0
DO23514	64 years, male, NA, stage:2, alive, 1290 days	1107.2
DO23515	71 years, male, NA, stage:2, alive, 1230 days	1106.4
DO45307	54 years, female, NA, stage:4, dead, 240 days	1098.8
DO45231	84 years, male, NA, stage:2, alive, 930 days	1091.6
DO50799	66 years, female, NA, stage:2, alive, 540 days	1087.7
DO45121	61 years, male, NA, stage:3, alive, 1530 days	1085.0
DO50803	62 years, female, NA, stage:1, alive, 540 days	1083.8
DO23549	74 years, male, NA, stage:3, alive, 990 days	1074.0
DO50818	65 years, male, NA, stage:2, alive, 510 days	1071.5
DO45219	78 years, male, NA, stage:2, alive, 1080 days	1065.1
DO50844	75 years, male, NA, stage:4, alive, 300 days	1055.8
DO45173	63 years, male, NA, stage:3, alive, 1170 days	1044.1
DO48743	69 years, female, NA, stage:2, alive, 570 days	1043.8
DO45279	67 years, male, NA, stage:3, alive, 1290 days	1035.4
DO48723	73 years, male, NA, stage:1, alive, 600 days	1017.2
DO45205	67 years, female, NA, stage:2, dead, 90 days	1000.5
DO45227	57 years, female, NA, stage:2, alive, 1020 days	999.5
DO45235	68 years, female, NA, stage:1, alive, 900 days	986.5
DO45299	70 years, female, NA, stage:1, alive, 1440 days	968.0
DO45267	73 years, male, NA, stage:3, dead, 570 days	961.5
DO48697	64 years, female, NA, stage:2, dead, 810 days	952.9
DO45093	71 years, male, NA, stage:2, dead, 720 days	941.3
DO50809	56 years, male, NA, stage:3, dead, 720 days	934.1
DO23510	80 years, female, NA, stage:2, alive, 870 days	927.0
DO48712	50 years, male, NA, stage:2, alive, 810 days	926.1
DO48757	68 years, female, NA, stage:3, alive, 480 days	923.6
DO45257	46 years, male, NA, stage:3, alive, 810 days	921.4
DO45179	78 years, female, NA, stage:2, alive, 600 days	918.1
DO23527	72 years, male, NA, stage:1, alive, 1050 days	912.0
DO23529	72 years, male, NA, stage:4, alive, 930 days	910.7
DO50806	70 years, male, NA, stage:4, alive, 540 days	906.5
DO45177	81 years, female, NA, stage:3, alive, 1260 days	905.6
DO48761	55 years, male, NA, stage:2, alive, 870 days	904.2
DO50850	74 years, male, NA, stage:3, alive, 720 days	891.3
DO48704	68 years, female, NA, stage:3, alive, 750 days	877.0
DO23525	71 years, male, NA, stage:4, alive, 1050 days	867.0
DO48716	71 years, male, NA, stage:2, alive, 720 days	865.4
DO45239	42 years, male, NA, stage:2, alive, 870 days	860.8
DO45221	75 years, female, NA, stage:4, dead, 390 days	860.6
DO48695	77 years, male, NA, stage:2, alive, 720 days	859.2
DO45201	49 years, male, NA, stage:1, alive, 900 days	856.5
DO48719	80 years, male, NA, stage:2, alive, 690 days	854.9
DO48700	78 years, female, NA, stage:2, alive, 810 days	852.1
DO23511	83 years, female, NA, stage:3, dead, 180 days	850.8
DO23509	60 years, male, NA, stage:3, dead, 780 days	849.4
DO50832	73 years, male, NA, stage:3, alive, 90 days	837.8
DO45096	69 years, male, NA, stage:2, dead, 1290 days	831.4
DO45233	83 years, male, NA, stage:3, alive, 900 days	831.1
DO50820	77 years, female, NA, stage:3, alive, 510 days	829.8
DO45269	59 years, male, NA, stage:3, alive, 750 days	819.7
DO45117	73 years, female, NA, stage:2, dead, 1110 days	812.5
DO45183	72 years, female, NA, stage:2, dead, 570 days	806.1
DO50805	72 years, male, NA, stage:2, alive, 690 days	801.9
DO45203	71 years, female, NA, stage:2, alive, 1170 days	790.6
DO45137	38 years, male, NA, stage:1, alive, 1320 days	779.6
DO45263	67 years, male, NA, stage:3, dead, 270 days	776.7
DO45143	69 years, male, NA, stage:3, alive, 1290 days	775.6
DO23537	79 years, male, NA, stage:2, dead, 900 days	768.0
DO48725	66 years, male, NA, stage:1, alive, 780 days	767.5
DO50774	68 years, female, NA, stage:2, alive, 720 days	765.5
DO45253	50 years, male, NA, stage:2, alive, 870 days	752.2
DO45161	74 years, male, NA, stage:2, dead, 540 days	747.7
DO23536	56 years, male, NA, stage:2, alive, 930 days	743.6
DO45209	70 years, male, NA, stage:4, alive, 1350 days	741.7
DO45123	78 years, female, NA, stage:2, dead, 570 days	736.2
DO23539	77 years, male, NA, stage:1, alive, 1110 days	734.5
DO23550	69 years, male, NA, stage:1, alive, 990 days	732.1
DO48733	72 years, male, NA, stage:2, alive, 600 days	731.1
DO50807	67 years, male, NA, stage:1, alive, 540 days	730.6
DO45281	83 years, male, NA, stage:4, alive, 750 days	728.3
DO45301	56 years, male, NA, stage:2, dead, 1440 days	714.5
DO23521	63 years, male, NA, stage:3, alive, 1110 days	712.3
DO45129	61 years, male, NA, stage:3, alive, 1470 days	711.8
DO45191	61 years, female, NA, stage:2, alive, 1200 days	708.8
DO50859	77 years, male, NA, stage:2, alive, 180 days	706.5
DO48706	72 years, male, NA, stage:2, alive, 870 days	702.3
DO50822	66 years, male, NA, stage:2, alive, 510 days	698.7
DO48672	81 years, male, NA, stage:2, alive, 450 days	698.7
DO48742	76 years, male, NA, stage:2, alive, 600 days	697.5
DO48677	58 years, male, NA, stage:3, alive, 1140 days	696.4
DO45213	58 years, male, NA, stage:1, alive, 1200 days	695.0
DO45187	32 years, female, NA, stage:1, alive, 1260 days	693.8
DO45207	68 years, male, NA, stage:1, alive, 1050 days	689.4
DO45113	58 years, male, NA, stage:3, alive, 1560 days	688.5
DO48682	72 years, female, NA, stage:3, dead, 120 days	684.6
DO45091	56 years, male, NA, stage:2, dead, 1320 days	683.1
DO45265	73 years, male, NA, stage:3, alive, 1020 days	682.2
DO45217	69 years, female, NA, stage:3, dead, 270 days	678.9
DO45094	76 years, male, NA, stage:3, alive, 1650 days	675.7
DO50825	70 years, male, NA, stage:2, alive, 390 days	675.5
DO48736	76 years, female, NA, stage:1, alive, 600 days	672.5
DO50840	49 years, male, NA, stage:2, alive, 330 days	670.1
DO45229	74 years, male, NA, stage:1, alive, 990 days	665.1
DO45273	62 years, male, NA, stage:2, alive, 480 days	660.8
DO45133	64 years, male, NA, stage:3, dead, 660 days	659.8
DO45193	68 years, female, NA, stage:4, dead, 120 days	659.7
DO50855	47 years, male, NA, stage:2, alive, 570 days	659.3
DO50789	73 years, female, NA, stage:2, alive, 570 days	642.7
DO50776	75 years, male, NA, stage:1, alive, 690 days	642.0
DO23526	66 years, male, NA, stage:3, alive, 1050 days	641.8
DO45103	47 years, male, NA, stage:3, alive, 450 days	639.5
DO23531	78 years, female, NA, stage:3, alive, 900 days	639.2
DO23516	69 years, male, NA, stage:3, dead, 20 days	624.4
DO45211	76 years, male, NA, stage:3, alive, 240 days	622.9
DO45255	81 years, male, NA, stage:3, alive, 720 days	606.0
DO45111	74 years, male, NA, stage:2, alive, 1590 days	599.0
DO23538	67 years, male, NA, stage:2, alive, 450 days	598.7
DO48715	58 years, female, NA, stage:2, dead, 690 days	595.0
DO45097	69 years, male, NA, stage:3, alive, 1620 days	584.6
DO50785	37 years, male, NA, stage:4, dead, 90 days	579.3
DO50802	49 years, male, NA, stage:2, alive, 930 days	577.0
DO45167	67 years, male, NA, stage:2, dead, 1440 days	575.5
DO48751	68 years, male, NA, stage:2, dead, 480 days	572.0
DO45285	59 years, male, NA, stage:3, alive, 480 days	570.0
DO50783	62 years, male, NA, stage:3, alive, 480 days	568.8
DO45163	76 years, male, NA, stage:2, alive, 960 days	568.5
DO48760	70 years, female, NA, stage:2, alive, 690 days	566.9
DO45169	74 years, male, NA, stage:3, alive, 1350 days	566.3
DO45297	61 years, female, NA, stage:4, dead, 1260 days	565.5
DO48759	73 years, male, NA, stage:3, alive, 720 days	561.3
DO50798	77 years, male, NA, stage:3, dead, 30 days	557.7
DO45237	58 years, male, NA, stage:2, alive, 900 days	545.0
DO23518	67 years, male, NA, stage:2, alive, 1320 days	544.5
DO45095	66 years, male, NA, stage:2, alive, 1620 days	539.3
DO48717	54 years, male, NA, stage:4, dead, 180 days	527.0
DO45181	84 years, female, NA, stage:2, alive, 1200 days	526.3
DO45185	89 years, male, NA, stage:2, alive, 600 days	522.9
DO48727	81 years, female, NA, stage:2, dead, 390 days	519.9
DO48746	76 years, male, NA, stage:3, alive, 570 days	514.1
DO23541	65 years, male, NA, stage:2, alive, 930 days	513.6
DO45199	86 years, female, NA, stage:2, alive, 1350 days	512.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	511.3
DO45251	57 years, female, NA, stage:2, alive, 900 days	510.9
DO45145	78 years, male, NA, stage:3, dead, 60 days	509.4
DO23552	80 years, female, NA, stage:1, alive, 810 days	497.8
DO50808	68 years, male, NA, stage:2, alive, 570 days	496.9
DO23546	63 years, male, NA, stage:2, alive, 1050 days	489.3
DO45149	70 years, female, NA, stage:2, alive, 1260 days	481.4
DO45215	65 years, male, NA, stage:2, alive, 1170 days	479.6
DO227801	77 years, female, NA, stage:1, alive, 660 days	471.1
DO23512	60 years, male, NA, stage:1, alive, 1260 days	465.7
DO50816	63 years, male, NA, stage:2, alive, 390 days	458.7
DO50791	79 years, female, NA, stage:1, dead, 480 days	458.4
DO45247	31 years, female, NA, stage:2, alive, 210 days	451.4
DO48681	57 years, male, NA, stage:2, alive, 900 days	444.1
DO50804	81 years, male, NA, stage:2, alive, 720 days	442.0
DO23543	63 years, male, NA, stage:2, alive, 1020 days	441.0
DO45289	78 years, female, NA, stage:3, alive, 360 days	426.4
DO23540	73 years, male, NA, stage:1, alive, 750 days	420.3
DO23528	45 years, female, NA, stage:2, alive, 1020 days	418.1
DO23533	61 years, male, NA, stage:2, alive, 900 days	416.0
DO50813	56 years, male, NA, stage:2, alive, 420 days	411.4
DO45101	63 years, male, NA, stage:2, alive, 1680 days	403.7
DO45099	46 years, male, NA, stage:3, alive, 1590 days	393.1
DO48737	52 years, male, NA, stage:1, alive, 720 days	391.3
DO23545	67 years, male, NA, stage:2, dead, 570 days	380.2
DO23513	76 years, male, NA, stage:3, alive, 1200 days	376.4
DO23551	73 years, male, NA, stage:3, dead, 150 days	373.5
DO45109	63 years, male, NA, stage:2, alive, 1590 days	368.6
DO50857	72 years, male, NA, stage:2, alive, 210 days	360.3
DO45243	74 years, female, NA, stage:3, alive, 930 days	358.7
DO50845	72 years, male, NA, stage:3, alive, 210 days	351.3
DO45241	49 years, male, NA, stage:1, alive, 1080 days	347.2
DO48701	78 years, male, NA, stage:2, alive, 780 days	341.1
DO45175	74 years, male, NA, stage:2, alive, 1140 days	334.6
DO23517	62 years, male, NA, stage:2, alive, 1200 days	326.8
DO48721	58 years, female, NA, stage:1, alive, 900 days	325.8
DO50793	76 years, male, NA, stage:4, alive, 540 days	317.6
DO50811	62 years, male, NA, stage:1, alive, 450 days	314.7
DO48693	71 years, male, NA, stage:2, alive, 900 days	314.0
DO45107	63 years, female, NA, stage:2, alive, 1710 days	312.7
DO50839	47 years, female, NA, stage:3, alive, 330 days	304.5
DO48674	80 years, male, NA, stage:2, alive, 1260 days	304.3
DO48741	64 years, male, NA, stage:3, alive, 240 days	286.3
DO23532	71 years, female, NA, stage:1, alive, 960 days	273.5
DO23548	78 years, female, NA, stage:1, alive, 840 days	266.1
DO45195	62 years, male, NA, stage:1, alive, 390 days	265.0
DO50814	83 years, male, NA, stage:3, alive, 420 days	263.5
DO23534	60 years, male, NA, stage:2, alive, 840 days	258.5
DO45125	58 years, male, NA, stage:3, alive, 1680 days	258.0
DO50817	75 years, male, NA, stage:2, alive, 390 days	254.1
DO227643	79 years, male, NA, stage:2, alive, 1260 days	222.7
DO45105	61 years, male, NA, stage:1, alive, 1680 days	193.4
DO23544	67 years, male, NA, stage:2, alive, 960 days	178.8
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
363	Tumor	1.3
1025	Tumor	1.1
715	Tumor	0.9
395	Tumor	0.8
975	Tumor	0.7
745	Tumor	0.7
211	Tumor	0.7
661	Tumor	0.7
538	Normal	0.7
713	Tumor	0.6
937	Tumor	0.6
697	Tumor	0.6
533	Tumor	0.6
554	Normal	0.6
471	Tumor	0.6
1043	Tumor	0.6
223	Tumor	0.5
525	Tumor	0.5
925	Tumor	0.5
257	Tumor	0.5
911	Tumor	0.4
755	Tumor	0.4
817	Tumor	0.4
921	Tumor	0.4
124	Normal	0.4
537	Tumor	0.4
1031	Tumor	0.4
227	Tumor	0.4
965	Tumor	0.4
851	Tumor	0.4
385	Tumor	0.4
744	Normal	0.4
716	Normal	0.4
823	Tumor	0.4
343	Tumor	0.4
1041	Tumor	0.4
492	Normal	0.3
617	Tumor	0.3
861	Tumor	0.3
535	Tumor	0.3
1015	Tumor	0.3
983	Tumor	0.3
135	Tumor	0.3
883	Tumor	0.3
951	Tumor	0.3
1021	Tumor	0.3
743	Tumor	0.3
878	Normal	0.3
685	Tumor	0.2
483	Tumor	0.2
952	Normal	0.2
746	Normal	0.2
917	Tumor	0.2
147	Tumor	0.2
557	Tumor	0.2
914	Normal	0.2
545	Tumor	0.2
311	Tumor	0.2
375	Tumor	0.2
553	Tumor	0.2
125	Tumor	0.2
567	Tumor	0.2
966	Normal	0.2
721	Tumor	0.1
963	Tumor	0.1
955	Tumor	0.1
131	Tumor	0.1
451	Tumor	0.1
915	Tumor	0.1
1028	Normal	0.1
141	Tumor	0.1
881	Tumor	0.1
344	Normal	0.1
473	Tumor	0.1
342	Normal	0.0
957	Tumor	0.0
493	Tumor	0.0
185	Tumor	0.0
434	Normal	0.0
778	Normal	0.0
283	Tumor	0.0
491	Tumor	0.0
517	Tumor	0.0
1027	Tumor	0.0
953	Tumor	0.0
421	Tumor	0.0
515	Tumor	0.0
477	Tumor	0.0
461	Tumor	0.0
813	Tumor	0.0
815	Tumor	0.0
874	Normal	0.0
367	Tumor	0.0
393	Tumor	0.0
467	Tumor	-0.1
137	Tumor	-0.1
224	Normal	-0.1
387	Tumor	-0.1
443	Tumor	-0.1
161	Tumor	-0.1
816	Normal	-0.1
814	Normal	-0.1
474	Normal	-0.1
727	Tumor	-0.1
724	Normal	-0.1
518	Normal	-0.1
857	Tumor	-0.1
355	Tumor	-0.1
452	Normal	-0.1
112	Tumor	-0.2
142	Normal	-0.2
967	Tumor	-0.2
738	Normal	-0.2
365	Tumor	-0.2
111	Normal	-0.2
1026	Normal	-0.2
427	Tumor	-0.2
867	Tumor	-0.2
722	Normal	-0.2
976	Normal	-0.2
686	Normal	-0.2
714	Normal	-0.2
271	Tumor	-0.2
913	Tumor	-0.2
728	Normal	-0.2
425	Tumor	-0.2
114	Normal	-0.2
858	Normal	-0.2
877	Tumor	-0.2
981	Tumor	-0.2
824	Normal	-0.2
868	Normal	-0.2
364	Normal	-0.2
977	Tumor	-0.2
145	Tumor	-0.2
526	Normal	-0.2
497	Tumor	-0.2
261	Tumor	-0.2
463	Tumor	-0.3
284	Normal	-0.3
415	Tumor	-0.3
128	Normal	-0.3
573	Tumor	-0.3
394	Normal	-0.3
1022	Normal	-0.3
864	Normal	-0.3
742	Normal	-0.3
267	Tumor	-0.3
462	Normal	-0.3
956	Normal	-0.3
862	Normal	-0.3
923	Tumor	-0.3
1045	Tumor	-0.3
516	Normal	-0.3
172	Normal	-0.3
498	Normal	-0.3
466	Normal	-0.3
221	Tumor	-0.3
327	Tumor	-0.3
866	Normal	-0.3
741	Tumor	-0.3
212	Normal	-0.3
873	Tumor	-0.3
213	Tumor	-0.3
447	Tumor	-0.3
943	Tumor	-0.3
698	Normal	-0.4
362	Normal	-0.4
863	Tumor	-0.4
865	Tumor	-0.4
546	Normal	-0.4
286	Normal	-0.4
1016	Normal	-0.4
968	Normal	-0.4
455	Tumor	-0.4
392	Normal	-0.4
412	Normal	-0.4
494	Normal	-0.4
136	Normal	-0.4
488	Normal	-0.4
222	Normal	-0.4
231	Tumor	-0.4
1042	Normal	-0.4
376	Normal	-0.4
1032	Normal	-0.4
696	Normal	-0.4
297	Tumor	-0.4
356	Normal	-0.4
258	Normal	-0.4
954	Normal	-0.4
786	Normal	-0.4
396	Normal	-0.4
756	Normal	-0.4
984	Normal	-0.4
391	Tumor	-0.4
916	Normal	-0.4
884	Normal	-0.4
148	Normal	-0.4
785	Tumor	-0.4
818	Normal	-0.4
328	Normal	-0.4
187	Tumor	-0.4
366	Normal	-0.4
123	Tumor	-0.5
938	Normal	-0.5
423	Tumor	-0.5
411	Tumor	-0.5
416	Normal	-0.5
272	Normal	-0.5
388	Normal	-0.5
723	Tumor	-0.5
232	Normal	-0.5
228	Normal	-0.5
478	Normal	-0.5
964	Normal	-0.5
482	Normal	-0.5
285	Tumor	-0.5
852	Normal	-0.5
357	Tumor	-0.5
737	Tumor	-0.5
523	Tumor	-0.5
277	Tumor	-0.5
534	Normal	-0.5
262	Normal	-0.5
918	Normal	-0.5
944	Normal	-0.5
472	Normal	-0.5
188	Normal	-0.5
386	Normal	-0.5
146	Normal	-0.5
912	Normal	-0.5
126	Normal	-0.5
536	Normal	-0.5
113	Tumor	-0.5
186	Normal	-0.5
527	Tumor	-0.5
1044	Normal	-0.5
313	Tumor	-0.5
924	Normal	-0.5
922	Normal	-0.5
171	Tumor	-0.5
514	Normal	-0.5
882	Normal	-0.5
777	Tumor	-0.5
268	Normal	-0.5
484	Normal	-0.6
278	Normal	-0.6
982	Normal	-0.6
958	Normal	-0.6
1014	Normal	-0.6
162	Normal	-0.6
353	Tumor	-0.6
524	Normal	-0.6
195	Tumor	-0.6
138	Normal	-0.6
528	Normal	-0.6
448	Normal	-0.6
384	Normal	-0.6
341	Tumor	-0.6
352	Normal	-0.6
978	Normal	-0.6
481	Tumor	-0.6
132	Normal	-0.6
695	Tumor	-0.6
926	Normal	-0.6
331	Tumor	-0.6
464	Normal	-0.6
383	Tumor	-0.6
298	Normal	-0.6
1046	Normal	-0.7
444	Normal	-0.7
456	Normal	-0.7
368	Normal	-0.7
214	Normal	-0.7
436	Normal	-0.7
358	Normal	-0.7
445	Tumor	-0.7
563	Tumor	-0.7
433	Tumor	-0.7
217	Tumor	-0.7
468	Normal	-0.7
127	Tumor	-0.7
426	Normal	-0.7
361	Tumor	-0.7
422	Normal	-0.7
432	Normal	-0.7
424	Normal	-0.7
354	Normal	-0.8
312	Normal	-0.8
465	Tumor	-0.8
218	Normal	-0.8
314	Normal	-0.8
428	Normal	-0.8
413	Tumor	-0.8
662	Normal	-0.8
487	Tumor	-0.8
616	Normal	-0.8
446	Normal	-0.9
196	Normal	-0.9
664	Normal	-0.9
332	Normal	-0.9
571	Tumor	-0.9
672	Normal	-0.9
513	Tumor	-0.9
568	Normal	-0.9
351	Tumor	-0.9
648	Normal	-0.9
635	Tumor	-0.9
435	Tumor	-0.9
414	Normal	-0.9
574	Normal	-0.9
647	Tumor	-0.9
572	Normal	-0.9
1013	Tumor	-0.9
636	Normal	-1.0
671	Tumor	-1.0
628	Normal	-1.0
663	Tumor	-1.0
558	Normal	-1.0
192	Normal	-1.0
564	Normal	-1.0
618	Normal	-1.1
666	Normal	-1.1
191	Tumor	-1.1
642	Normal	-1.1
615	Tumor	-1.2
641	Tumor	-1.2
431	Tumor	-1.3
627	Tumor	-1.3
665	Tumor	-1.5
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA004426	Antibody CAB004647
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS