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S100A10
HPA
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  • S100A10
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Endocrine cells: High
Enterocytes: High
Enterocytes - Microvilli: High
Goblet cells: High
Paneth cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:435.2 nTPM
HPA:435.2 nTPM
GTEx:312.4 nTPM
FANTOM5:887.3 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003340Antibody CAB025484
Endocrine cells High-
Enterocytes High-
Enterocytes - Microvilli High-
Glandular cells -Low
Goblet cells High-
Paneth cells Not detected-




SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

435.2
overview
Male, age 65
Small intestine sample 232
nTPM: 518.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 425.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 293.3
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 502.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

312.4
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 312.4
Samples: 187

Max nTPM: 805.0
Min nTPM: 106.4
Std nTPM: 133.4
Median nTPM: 293.2
GTEX-111YS-1426-SM-5GID8 60-69 years, male 805.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 729.7
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 627.3
GTEX-YFCO-1326-SM-664NV 40-49 years, male 600.5
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 594.7
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 586.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 563.1
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 560.5
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 553.8
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 553.2
GTEX-144GM-1026-SM-79OKU 20-29 years, male 541.7
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 534.6
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 528.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 526.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 525.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 514.7
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 502.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 499.4
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 496.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 496.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 495.9
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 478.0
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 474.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 473.6
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 470.5
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 465.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 464.4
GTEX-1192X-2526-SM-59868 50-59 years, male 462.6
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 461.7
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 461.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 452.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 449.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 449.2
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 441.9
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 437.9
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 436.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 436.5
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 436.1
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 427.5
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 418.4
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 413.9
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 413.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 411.4
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 409.7
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 402.5
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 400.9
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 398.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 397.3
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 393.3
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 390.6
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 388.2
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 382.7
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 381.8
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 379.3
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 377.5
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 373.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 372.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 370.3
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 369.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 368.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 366.7
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 366.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 366.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 364.0
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 363.6
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 358.0
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 357.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 356.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 355.7
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 352.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 348.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 345.8
GTEX-14PK6-1626-SM-6871I 70-79 years, female 342.4
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 339.9
GTEX-ZTSS-0926-SM-59865 40-49 years, male 336.7
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 334.4
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 334.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 334.1
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 331.8
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 323.4
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 320.7
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 320.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 319.6
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 316.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 316.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 316.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 315.3
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 307.8
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 305.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 302.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 295.9
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 294.3
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 293.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 293.2
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 292.9
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 292.6
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 291.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 289.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 285.9
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 285.4
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 283.7
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 281.1
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 279.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 275.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 274.7
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 274.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 274.2
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 268.3
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 264.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 263.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 260.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 258.2
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 257.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 256.4
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 253.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 246.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 245.7
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 243.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 240.8
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 239.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 235.1
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 233.3
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 229.5
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 225.1
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 221.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 221.4
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 220.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 219.8
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 219.0
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 218.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 216.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 215.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 213.1
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 212.2
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 208.4
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 204.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 204.6
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 204.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 203.2
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 202.6
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 201.0
GTEX-1C475-1426-SM-793CH 40-49 years, female 199.3
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 198.2
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 194.9
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 193.6
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 192.8
GTEX-13O61-1326-SM-5KM31 60-69 years, male 192.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 192.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 191.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 190.2
GTEX-13111-1426-SM-5DUW3 50-59 years, male 188.0
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 187.8
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 185.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 184.7
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 182.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 176.5
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 170.8
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 167.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 164.8
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 164.7
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 162.8
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 162.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 160.4
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 158.7
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 158.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 158.1
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 157.8
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 156.4
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 154.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 152.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 151.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 145.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 144.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 144.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 141.8
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 141.5
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 139.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 138.3
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 136.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 134.7
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 133.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 131.9
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 130.9
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 121.2
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 120.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 119.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 106.4
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

887.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 887.3
FF:10024-101D6 15,40,85 years, mixed 887.3

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