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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Cells in glomeruli:
Medium
Cells in tubules:
Medium
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
2015.5
nTPM
HPA:
1025.3
nTPM
GTEx:
2015.5
nTPM
FANTOM5:
481.1
Scaled Tags Per Million
KIDNEY - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA065327
Cells in glomeruli
Medium
Cells in tubules
Medium
KIDNEY - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1025.3
Female, age 58
Kidney sample 55 nTPM: 1050.4
Cell types%
Cells in tubules:
60
Cells in glomeruli:
20
Fibroblasts:
5
Other cell types:
15
Female, age 67
Kidney sample 56 nTPM: 1010.6
Cell types%
Cells in tubules:
70
Cells in glomeruli:
15
Fibroblasts:
10
Other cell types:
5
Female, age 55
Kidney sample 57 nTPM: 978
Cell types%
Cells in tubules:
80
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
5
Male, age 46
Kidney sample 58 nTPM: 1286
Cell types%
Cells in tubules:
60
Cells in glomeruli:
25
Fibroblasts:
5
Other cell types:
10
Female, age 57
Kidney sample 358 nTPM: 858.1
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Male, age 78
Kidney sample 377 nTPM: 872
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
5
Other cell types:
20
Male, age 73
Kidney sample 380 nTPM: 1594.6
Cell types%
Cells in tubules:
60
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
20
Female, age 59
Kidney sample 394 nTPM: 711.7
Cell types%
Cells in tubules:
65
Cells in glomeruli:
10
Fibroblasts:
10
Other cell types:
15
Female, age 48
Kidney sample 414 nTPM: 865.9
Cell types%
Cells in tubules:
60
Cells in glomeruli:
5
Fibroblasts:
10
Other cell types:
25
KIDNEY - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2015.5
GTEx sample id
Sample description
nTPM
Kidney - Cortex Average nTPM: 2015.5
Samples: 85
Max nTPM: 3907.4
Min nTPM: 1263.2
Std nTPM: 587.6
Median nTPM: 1848.6
GTEX-NPJ8-2226-SM-3TW8D
40-49 years, male
3907.4
GTEX-11TTK-1926-SM-5PNW8
60-69 years, female
3902.3
GTEX-1PWST-2226-SM-EVR3G
70-79 years, male
3244.9
GTEX-1JMPZ-1226-SM-ARU8Y
30-39 years, male
3215.1
GTEX-T6MN-1826-SM-EXOHN
50-59 years, male
3118.5
GTEX-13NYB-1726-SM-5N9G2
40-49 years, male
3050.9
GTEX-1JMQJ-1726-SM-E9U4V
50-59 years, male
2913.8
GTEX-ZYT6-2226-SM-5GIC9
30-39 years, male
2878.0
GTEX-11OF3-1326-SM-5N9FJ
60-69 years, male
2833.3
GTEX-1NV8Z-2226-SM-EXOJ2
60-69 years, male
2818.4
GTEX-1CB4J-1926-SM-7MGX8
60-69 years, male
2749.8
GTEX-1N2DW-1826-SM-EAZ54
50-59 years, male
2747.9
GTEX-17F97-1926-SM-7IGM4
50-59 years, male
2730.2
GTEX-14E6D-2526-SM-5YYA9
50-59 years, male
2718.6
GTEX-QDVN-1626-SM-48TZC
50-59 years, male
2631.1
GTEX-1399S-0526-SM-5IJG8
30-39 years, female
2599.6
GTEX-1C6VQ-2326-SM-7IGN1
50-59 years, male
2548.2
GTEX-QDT8-1726-SM-EYYV6
30-39 years, female
2498.0
GTEX-ZDXO-0226-SM-4WKH7
60-69 years, male
2405.8
GTEX-1QP6S-1526-SM-EXUSG
40-49 years, male
2397.1
GTEX-1J1OQ-1426-SM-AHZ3P
40-49 years, female
2325.1
GTEX-O5YV-1226-SM-EV795
60-69 years, female
2300.0
GTEX-17HHY-2326-SM-7KFSR
50-59 years, male
2285.6
GTEX-1KWVE-0826-SM-CXZKO
30-39 years, male
2283.9
GTEX-15CHQ-2126-SM-6871M
60-69 years, male
2275.6
GTEX-1GN1U-2126-SM-AHZ4J
50-59 years, female
2262.0
GTEX-1GF9W-1326-SM-7P8PX
60-69 years, male
2216.6
GTEX-T5JC-1526-SM-4DM68
20-29 years, male
2184.5
GTEX-1JMQK-1926-SM-CJI3B
60-69 years, male
2167.4
GTEX-13RTJ-2226-SM-5S2Q1
60-69 years, male
2144.5
GTEX-14C5O-2026-SM-5YYB1
60-69 years, male
2120.0
GTEX-1GTWX-1826-SM-9QEHG
60-69 years, male
2036.2
GTEX-1F48J-2226-SM-7MXTN
50-59 years, female
1998.1
GTEX-17F96-1926-SM-7MGWY
70-79 years, male
1988.4
GTEX-13OVL-1826-SM-5KLZR
50-59 years, male
1977.2
GTEX-1R9PO-1626-SM-E6CPT
60-69 years, female
1943.4
GTEX-ZVZP-0926-SM-5GIDB
50-59 years, male
1938.7
GTEX-13O1R-2526-SM-5N9FW
60-69 years, male
1936.5
GTEX-ZC5H-1726-SM-5HL7X
40-49 years, female
1911.0
GTEX-13112-2126-SM-5GCO4
50-59 years, male
1868.0
GTEX-1HB9E-1826-SM-D4P33
50-59 years, male
1863.1
GTEX-P4QS-1126-SM-3NMD5
60-69 years, male
1854.9
GTEX-1LG7Y-2726-SM-D5OVW
50-59 years, male
1848.6
GTEX-REY6-1826-SM-EAZAT
60-69 years, male
1841.1
GTEX-13OVI-1126-SM-5KLZF
60-69 years, female
1827.4
GTEX-Y5V6-2026-SM-5IFHO
60-69 years, male
1821.5
GTEX-1GMR3-2426-SM-7MXV2
40-49 years, male
1795.1
GTEX-1I1GP-1926-SM-CNNQU
50-59 years, male
1789.0
GTEX-15DYW-2026-SM-6AJBD
60-69 years, female
1787.5
GTEX-Y5V5-1226-SM-EYYVP
60-69 years, female
1782.8
GTEX-14C39-2126-SM-664OH
40-49 years, male
1758.9
GTEX-1E2YA-1626-SM-7MGXS
50-59 years, male
1748.0
GTEX-1A8FM-2026-SM-7P8RN
50-59 years, female
1729.4
GTEX-12696-0926-SM-5FQTV
60-69 years, male
1714.3
GTEX-16MT8-1926-SM-7EPGL
60-69 years, female
1702.8
GTEX-ZLFU-0926-SM-5P9F8
40-49 years, male
1681.5
GTEX-QLQW-1626-SM-CMKFE
30-39 years, male
1663.6
GTEX-S33H-1426-SM-EZ6L7
30-39 years, male
1647.7
GTEX-1IKK5-0926-SM-A9G2U
60-69 years, male
1643.4
GTEX-1BAJH-1826-SM-731DA
70-79 years, male
1640.6
GTEX-1EKGG-2226-SM-7IGOA
60-69 years, male
1617.4
GTEX-145MN-0326-SM-5QGQI
30-39 years, male
1604.0
GTEX-1JJ6O-2526-SM-AHZ3J
60-69 years, male
1602.9
GTEX-1H3NZ-2126-SM-9WPQ6
60-69 years, male
1571.5
GTEX-1IL2V-1826-SM-ARU7R
70-79 years, male
1565.6
GTEX-13OW6-1826-SM-5N9F9
50-59 years, male
1556.1
GTEX-1MUQO-2526-SM-E9TJN
60-69 years, male
1546.9
GTEX-1GF9V-1926-SM-9JGHE
60-69 years, male
1511.0
GTEX-XPVG-0526-SM-4B65N
50-59 years, male
1481.9
GTEX-1OJC4-2326-SM-DTXA5
50-59 years, female
1474.7
GTEX-147F4-2626-SM-5Q5CS
50-59 years, male
1465.0
GTEX-11GS4-2326-SM-5A5KS
60-69 years, male
1423.5
GTEX-1H3VY-1926-SM-9JGHJ
50-59 years, male
1422.9
GTEX-1HBPI-2026-SM-CE6RZ
50-59 years, male
1411.3
GTEX-RN64-1626-SM-48FD7
50-59 years, male
1407.9
GTEX-1JMLX-1526-SM-AHZ3N
50-59 years, male
1407.8
GTEX-ZE9C-1426-SM-4WKGM
60-69 years, male
1400.3
GTEX-1A3MW-2226-SM-73KUX
60-69 years, female
1392.7
GTEX-ZYFG-1626-SM-5GZYY
60-69 years, female
1366.5
GTEX-12WSG-0826-SM-5EQ5A
50-59 years, female
1358.8
GTEX-1HCU7-1826-SM-A9G2A
50-59 years, male
1353.4
GTEX-1497J-0826-SM-5NQAJ
60-69 years, male
1344.3
GTEX-1K9T9-1826-SM-CXZK2
50-59 years, female
1279.5
GTEX-1AX8Z-2326-SM-731CR
60-69 years, male
1274.9
GTEX-1N2EF-1426-SM-EXUSH
60-69 years, male
1263.2
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Kidney - Medulla Average nTPM: 1995.3
Samples: 4
Max nTPM: 2285.8
Min nTPM: 1536.8
Std nTPM: 312.7
Median nTPM: 2079.3
GTEX-T5JC-1626-SM-EZ6KW
20-29 years, male
2285.8
GTEX-RU72-1926-SM-EAZ3F
50-59 years, female
2282.5
GTEX-R55E-2026-SM-EZ6L1
20-29 years, male
1876.1
GTEX-TKQ2-0626-SM-EZ6LB
50-59 years, male
1536.8
KIDNEY - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
