HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:93.2 nTPM
GTEx:21.8 nTPM
FANTOM5:93.9 Scaled Tags Per Million
Pig:104.3 nTPM
Mouse:110.7 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017847
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 93.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.3
1898 Male, age 80, left hemisphere 60.4
1911 Female, age 85, right hemisphere 58.6
1855 Male, age 76, left hemisphere 50.7
2621 Female, age 67, right hemisphere 50.5
2148 Female, age 91, left hemisphere 49.9
2529 Female, age 94, left hemisphere 49.9
Dentate gyrus
nTPM: 55.4
2246 Female, age 85, both hemispheres 68.7
2531 Female, age 67, both hemispheres 67.0
1927 Female, age 91, both hemispheres 65.7
2528 Male, age 74, both hemispheres 51.6
2010 Male, age 76, both hemispheres 49.8
2530 Female, age 94, left hemisphere 29.7
Entorhinal gyrus
nTPM: 61.0
2764 Male, age 80, right hemisphere 80.6
1938 Female, age 85, left hemisphere 79.8
1787 Male, age 76, left hemisphere 57.4
2613 Female, age 94, left hemisphere 57.2
2117 Female, age 91, right hemisphere 47.0
2686 Male, age 75, right hemisphere 43.9
Hippocampus, CA1
nTPM: 70.3
2749 Male, age 80, left hemisphere 106.5
2045 Male, age 76, both hemispheres 70.2
2082 Female, age 91, right hemisphere 63.4
1873 Female, age 85, both hemispheres 58.3
2527 Male, age 74, both hemispheres 53.2
Hippocampus, CA2
nTPM: 53.5
1940 Female, age 85, left hemisphere 68.2
1892 Male, age 76, both hemispheres 58.5
2113 Female, age 91, right hemisphere 55.7
2437 Female, age 94, left hemisphere 47.7
2249 Male, age 74, both hemispheres 46.2
1963 Male, age 80, left hemisphere 45.0
Hippocampus, CA3
nTPM: 68.3
2137 Male, age 80, left hemisphere 106.2
2620 Female, age 94, left hemisphere 73.0
1867 Male, age 76, both hemispheres 69.8
1891 Female, age 85, both hemispheres 59.7
2861 Female, age 67, both hemispheres 51.5
2436 Male, age 74, both hemispheres 49.8
Parahippocampal cortex
nTPM: 71.3
1850 Male, age 80, both hemispheres 96.1
1933 Female, age 85, both hemispheres 88.4
2245 Female, age 91, both hemispheres 76.1
1990 Female, age 91, right hemisphere 75.3
2693 Female, age 94, both hemispheres 72.8
2250 Female, age 67, right hemisphere 72.7
2532 Female, age 72, left hemisphere 66.8
2018 Male, age 76, both hemispheres 65.2
2622 Female, age 67, right hemisphere 53.7
2692 Male, age 74, both hemispheres 46.2
Perirhinal gyrus
nTPM: 93.2
1847 Female, age 91, left hemisphere 113.4
1794 Male, age 80, right hemisphere 104.3
1841 Female, age 85, right hemisphere 98.9
2521 Female, age 94, right hemisphere 89.2
2848 Male, age 76, right hemisphere 60.1
Subiculum
nTPM: 59.1
1977 Female, age 85, both hemispheres 86.4
1901 Male, age 80, both hemispheres 69.7
2729 Female, age 91, right hemisphere 53.3
2619 Male, age 74, both hemispheres 51.4
2042 Male, age 76, both hemispheres 48.4
2438 Female, age 94, left hemisphere 45.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 53.2
Min nTPM: 5.4
Std nTPM: 9.8
Median nTPM: 19.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 53.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 50.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 47.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 44.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 43.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 42.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 42.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 42.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 41.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 39.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 93.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.9
FF:10169-103B7 60 years, female 108.0
FF:10153-102I9 76 years, female 79.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 104.3
Pig sample Sample description nTPM
Subiculum
nTPM: 85.5
Samples: 4

Max nTPM: 105.4
Min nTPM: 77.2
Sample A Female 105.4
Sample B Female 80.5
Sample C Male 78.7
Sample D Male 77.2
Dorsal hippocampus
nTPM: 69.1
Samples: 4

Max nTPM: 77.5
Min nTPM: 54.5
Sample A Female 77.5
Sample B Female 67.4
Sample C Male 76.8
Sample D Male 54.5
Entorhinal cortex
nTPM: 104.3
Samples: 4

Max nTPM: 110.1
Min nTPM: 97.0
Sample A Female 110.1
Sample B Female 108.2
Sample C Male 97.0
Sample D Male 101.8
Ventral hippocampus
nTPM: 60.0
Samples: 4

Max nTPM: 72.4
Min nTPM: 49.0
Sample A Female 52.5
Sample B Female 49.0
Sample C Male 65.9
Sample D Male 72.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 110.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.7
Samples: 4

Max nTPM: 137.9
Min nTPM: 94.7
Sample A Male 98.4
Sample B Male 111.7
Sample C Female 94.7
Sample D Female 137.9
Hippocampal formation
nTPM: 106.9
Samples: 4

Max nTPM: 117.4
Min nTPM: 93.3
Sample A Male 105.6
Sample B Male 111.3
Sample C Female 117.4
Sample D Female 93.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
74425565 Antisense, RP_051214_02_H06, Mouse strain C57BL/6J (56 days, male) 18.6
69104741 Antisense, RP_050316_02_B08, Mouse strain C57BL/6J (56 days, male) 13.2

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