HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:24.5 nTPM
HPA Brain:39.6 nTPM
GTEx:24.5 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:106.8 nTPM
Mouse:18.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077387
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 39.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 41.4
2529 Female, age 94, left hemisphere 33.2
2621 Female, age 67, right hemisphere 32.8
2148 Female, age 91, left hemisphere 30.5
1911 Female, age 85, right hemisphere 28.3
1855 Male, age 76, left hemisphere 27.5
Dentate gyrus
nTPM: 29.7
1927 Female, age 91, both hemispheres 39.6
2010 Male, age 76, both hemispheres 34.6
2246 Female, age 85, both hemispheres 29.9
2528 Male, age 74, both hemispheres 29.5
2530 Female, age 94, left hemisphere 23.5
2531 Female, age 67, both hemispheres 21.2
Entorhinal gyrus
nTPM: 29.9
1938 Female, age 85, left hemisphere 35.3
2764 Male, age 80, right hemisphere 35.3
1787 Male, age 76, left hemisphere 30.9
2117 Female, age 91, right hemisphere 28.5
2613 Female, age 94, left hemisphere 27.8
2686 Male, age 75, right hemisphere 21.8
Hippocampus, CA1
nTPM: 37.9
2749 Male, age 80, left hemisphere 60.7
1873 Female, age 85, both hemispheres 36.3
2527 Male, age 74, both hemispheres 34.4
2045 Male, age 76, both hemispheres 29.4
2082 Female, age 91, right hemisphere 28.6
Hippocampus, CA2
nTPM: 33.8
1892 Male, age 76, both hemispheres 44.1
1963 Male, age 80, left hemisphere 40.2
2249 Male, age 74, both hemispheres 34.0
1940 Female, age 85, left hemisphere 30.8
2113 Female, age 91, right hemisphere 27.7
2437 Female, age 94, left hemisphere 26.3
Hippocampus, CA3
nTPM: 32.1
2137 Male, age 80, left hemisphere 43.6
1867 Male, age 76, both hemispheres 34.8
2436 Male, age 74, both hemispheres 34.5
1891 Female, age 85, both hemispheres 27.6
2620 Female, age 94, left hemisphere 27.6
2861 Female, age 67, both hemispheres 24.4
Parahippocampal cortex
nTPM: 33.1
1850 Male, age 80, both hemispheres 38.6
1933 Female, age 85, both hemispheres 37.6
2250 Female, age 67, right hemisphere 37.0
1990 Female, age 91, right hemisphere 35.7
2245 Female, age 91, both hemispheres 35.2
2693 Female, age 94, both hemispheres 32.9
2532 Female, age 72, left hemisphere 30.3
2018 Male, age 76, both hemispheres 30.2
2692 Male, age 74, both hemispheres 29.2
2622 Female, age 67, right hemisphere 24.0
Perirhinal gyrus
nTPM: 39.6
1847 Female, age 91, left hemisphere 45.1
1794 Male, age 80, right hemisphere 42.7
1841 Female, age 85, right hemisphere 41.6
2521 Female, age 94, right hemisphere 35.8
2848 Male, age 76, right hemisphere 33.0
Subiculum
nTPM: 28.6
1977 Female, age 85, both hemispheres 31.9
1901 Male, age 80, both hemispheres 31.2
2438 Female, age 94, left hemisphere 30.4
2042 Male, age 76, both hemispheres 27.2
2619 Male, age 74, both hemispheres 26.7
2729 Female, age 91, right hemisphere 24.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.5
Samples: 197

Max nTPM: 66.0
Min nTPM: 6.5
Std nTPM: 11.3
Median nTPM: 22.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 62.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 54.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 52.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 49.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 48.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 47.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 46.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 46.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 45.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.1
FF:10169-103B7 60 years, female 45.6
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 106.8
Pig sample Sample description nTPM
Subiculum
nTPM: 97.6
Samples: 4

Max nTPM: 124.5
Min nTPM: 87.9
Sample A Female 124.5
Sample B Female 89.8
Sample C Male 87.9
Sample D Male 88.1
Dorsal hippocampus
nTPM: 106.8
Samples: 4

Max nTPM: 132.3
Min nTPM: 89.6
Sample A Female 132.3
Sample B Female 103.5
Sample C Male 101.8
Sample D Male 89.6
Entorhinal cortex
nTPM: 99.5
Samples: 4

Max nTPM: 113.9
Min nTPM: 92.2
Sample A Female 97.7
Sample B Female 113.9
Sample C Male 94.1
Sample D Male 92.2
Ventral hippocampus
nTPM: 93.8
Samples: 4

Max nTPM: 112.3
Min nTPM: 76.5
Sample A Female 94.3
Sample B Female 76.5
Sample C Male 92.1
Sample D Male 112.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.7
Sample A Male 20.0
Sample B Male 20.8
Sample C Female 17.3
Sample D Female 16.7
Hippocampal formation
nTPM: 17.4
Samples: 4

Max nTPM: 18.5
Min nTPM: 15.9
Sample A Male 18.0
Sample B Male 17.1
Sample C Female 18.5
Sample D Female 15.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
74821972 Antisense, RP_060321_02_F10, Mouse strain C57BL/6J (56 days, male) 2.7
71763628 Antisense, RP_050921_02_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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