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SLC22A6
HPA
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  • SLC22A6
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC22A6
Synonyms OAT1, PAHT, ROAT1
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 22 member 6
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

FDA approved drug targets
Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q12.3
Chromosome location (bp) 62936385 - 62984967
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000197901 (version 109)
Entrez gene 9356
HGNC HGNC:10970
UniProt Q4U2R8 (UniProt - Evidence at protein level)
neXtProt NX_Q4U2R8
GeneCards SLC22A6
Antibodypedia SLC22A6 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Secondary active transporter that functions as a Na(+)- independent organic anion (OA)/dicarboxylate antiporter where the uptake of one molecule of OA into the cell is coupled with an efflux of one molecule of intracellular dicarboxylate such as 2-oxoglutarate or glutarate 1, 2, 3, 4, 5, 6, 7. Mediates the uptake of OA across the basolateral side of proximal tubule epithelial cells, thereby contributing to the renal elimination of endogenous OA from the systemic circulation into the urine 8. Functions as a biopterin transporters involved in the uptake and the secretion of coenzymes tetrahydrobiopterin (BH4), dihydrobiopterin (BH2) and sepiapterin to urine, thereby determining baseline levels of blood biopterins 9. Transports prostaglandin E2 (PGE2) and prostaglandin F2-alpha (PGF2-alpha) and may contribute to their renal excretion 10. Also mediates the uptake of cyclic nucleotides such as cAMP and cGMP 11. Involved in the transport of neuroactive tryptophan metabolites kynurenate (KYNA) and xanthurenate (XA) and may contribute to their secretion from the brain 12, 13. May transport glutamate 14. Also involved in the disposition of uremic toxins and potentially toxic xenobiotics by the renal organic anion secretory pathway, helping reduce their undesired toxicological effects on the body 15, 16. Uremic toxins include the indoxyl sulfate (IS), hippurate/N-benzoylglycine (HA), indole acetate (IA), 3-carboxy-4-methyl-5-propyl-2-furanpropionate (CMPF) and urate 17, 18. Xenobiotics include the mycotoxin ochratoxin (OTA) 19. May also contribute to the transport of organic compounds in testes across the blood-testis-barrier 20.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is involved in the sodium-dependent transport and excretion of organic anions, some of which are potentially toxic. The encoded protein is an integral membrane protein and may be localized to the basolateral membrane. Four transcript variants encoding four different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC22A6-201
ENSP00000353597
ENST00000360421
Q4U2R8
[Direct mapping] Solute carrier family 22 member 6
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005901 [caveola]
GO:0006820 [anion transport]
GO:0008514 [organic anion transmembrane transporter activity]
GO:0009925 [basal plasma membrane]
GO:0014070 [response to organic cyclic compound]
GO:0015132 [prostaglandin transmembrane transporter activity]
GO:0015347 [sodium-independent organic anion transmembrane transporter activity]
GO:0015698 [inorganic anion transport]
GO:0015711 [organic anion transport]
GO:0015732 [prostaglandin transport]
GO:0015742 [alpha-ketoglutarate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0031404 [chloride ion binding]
GO:0032991 [protein-containing complex]
GO:0042802 [identical protein binding]
GO:0043252 [sodium-independent organic anion transport]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0097254 [renal tubular secretion]
GO:0098590 [plasma membrane region]
GO:0140323 [solute:anion antiporter activity]
Show all
550 aa
60.3 kDa
No >9
SLC22A6-202
ENSP00000367102
ENST00000377871
Q4U2R8
[Direct mapping] Solute carrier family 22 member 6
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0008514 [organic anion transmembrane transporter activity]
GO:0009925 [basal plasma membrane]
GO:0015132 [prostaglandin transmembrane transporter activity]
GO:0015347 [sodium-independent organic anion transmembrane transporter activity]
GO:0015698 [inorganic anion transport]
GO:0015711 [organic anion transport]
GO:0015732 [prostaglandin transport]
GO:0015742 [alpha-ketoglutarate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0043252 [sodium-independent organic anion transport]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0097254 [renal tubular secretion]
GO:0098590 [plasma membrane region]
Show all
563 aa
61.8 kDa
No >9
SLC22A6-203
ENSP00000404441
ENST00000421062
Q4U2R8
[Direct mapping] Solute carrier family 22 member 6
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0008514 [organic anion transmembrane transporter activity]
GO:0009925 [basal plasma membrane]
GO:0015132 [prostaglandin transmembrane transporter activity]
GO:0015347 [sodium-independent organic anion transmembrane transporter activity]
GO:0015698 [inorganic anion transport]
GO:0015711 [organic anion transport]
GO:0015732 [prostaglandin transport]
GO:0015742 [alpha-ketoglutarate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0097254 [renal tubular secretion]
GO:0098590 [plasma membrane region]
Show all
519 aa
57.4 kDa
No 9
SLC22A6-204
ENSP00000396401
ENST00000458333
Q4U2R8
[Direct mapping] Solute carrier family 22 member 6
Show all
Metabolic proteins
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005452 [solute:inorganic anion antiporter activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0008514 [organic anion transmembrane transporter activity]
GO:0009925 [basal plasma membrane]
GO:0015132 [prostaglandin transmembrane transporter activity]
GO:0015347 [sodium-independent organic anion transmembrane transporter activity]
GO:0015698 [inorganic anion transport]
GO:0015711 [organic anion transport]
GO:0015732 [prostaglandin transport]
GO:0015742 [alpha-ketoglutarate transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016323 [basolateral plasma membrane]
GO:0022857 [transmembrane transporter activity]
GO:0055085 [transmembrane transport]
GO:0070062 [extracellular exosome]
GO:0097254 [renal tubular secretion]
GO:0098590 [plasma membrane region]
Show all
506 aa
55.9 kDa
No 9

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