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VPS13A
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:2.7 nTPM
HPA Brain:33.7 nTPM
GTEx:2.7 nTPM
FANTOM5:65.1 Scaled Tags Per Million
Pig:19.1 nTPM
Mouse:16.4 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021652Antibody HPA021662
Glial cells LowNot detected
Neuronal cells MediumLow



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 30.9
2290 Female, age 72, unknown 40.1
2846 Female, age 79, unknown 36.1
1857 Female, age 85, left hemisphere 31.2
2288 Male, age 75, left hemisphere 29.6
1854 Male, age 80, left hemisphere 29.2
1781 Male, age 74, unknown 28.3
2289 Male, age 61, right hemisphere 26.9
2481 Female, age 94, left hemisphere 25.9
Globus pallidus, externus
nTPM: 15.4
2395 Male, age 75, both hemispheres 19.8
2772 Female, age 79, unknown 15.5
1996 Male, age 80, right hemisphere 15.3
2567 Female, age 72, unknown 14.4
2646 Male, age 61, right hemisphere 11.9
Globus pallidus, internus
nTPM: 15.0
2483 Female, age 94, right hemisphere 19.8
2287 Male, age 75, right hemisphere 16.7
1818 Male, age 74, unknown 15.6
2778 Female, age 91, both hemispheres 14.0
2037 Male, age 80, right hemisphere 13.9
2566 Female, age 72, unknown 12.6
2111 Female, age 85, right hemisphere 12.3
Nucleus accumbens
nTPM: 26.4
1856 Female, age 91, right hemisphere 33.9
1806 Female, age 85, left hemisphere 29.6
2824 Male, age 61, right hemisphere 29.5
2286 Male, age 75, left hemisphere 27.7
1783 Male, age 74, unknown 26.2
2698 Female, age 72, unknown 24.1
2391 Female, age 94, left hemisphere 24.0
2732 Male, age 80, right hemisphere 16.3
Nucleus basalis of Meynert
nTPM: 25.2
2393 Male, age 80, right hemisphere 35.6
2484 Female, age 94, left hemisphere 30.6
2821 Male, age 75, both hemispheres 22.9
2569 Male, age 61, both hemispheres 11.8
Nucleus of the diagonal band
nTPM: 33.7
2195 Female, age 85, both hemispheres 38.4
2029 Male, age 61, right hemisphere 38.0
2775 Male, age 80, right hemisphere 37.1
1812 Female, age 91, both hemispheres 33.3
1979 Male, age 74, unknown 21.5
Putamen
nTPM: 30.0
2466 Female, age 79, unknown 35.5
2489 Female, age 72, unknown 32.7
1838 Male, age 80, right hemisphere 32.4
1829 Male, age 74, unknown 31.1
1937 Female, age 91, right hemisphere 28.4
2482 Female, age 94, left hemisphere 25.2
2647 Male, age 75, left hemisphere 24.4
Septal nuclei
nTPM: 30.5
1960 Male, age 74, unknown 40.6
2031 Female, age 72, unknown 39.3
2629 Female, age 94, right hemisphere 35.5
2009 Female, age 91, both hemispheres 33.5
2059 Female, age 85, both hemispheres 25.3
2394 Male, age 61, left hemisphere 21.7
2199 Male, age 80, right hemisphere 17.6
Stria terminalis, bed nucleus
nTPM: 30.4
1974 Female, age 91, both hemispheres 34.9
2486 Female, age 94, both hemispheres 34.1
2201 Male, age 74, unknown 22.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.7
Samples: 246

Max nTPM: 6.7
Min nTPM: 1.1
Std nTPM: 0.9
Median nTPM: 2.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 5.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 5.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 4.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 4.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 4.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 4.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 4.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 4.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 4.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 4.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 4.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 4.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 4.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 4.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 4.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 4.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 4.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 4.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 4.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 4.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 3.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 3.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 3.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 3.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 3.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 3.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 3.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 3.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 3.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 3.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 3.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 3.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 3.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 3.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 3.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 3.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 3.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 3.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 3.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 3.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 3.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 3.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 3.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 3.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 3.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 3.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 3.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 3.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 3.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 3.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 3.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 3.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 3.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 3.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 3.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 3.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 3.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 3.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 3.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 3.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 3.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 3.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 3.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 3.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 3.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 3.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 3.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 3.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 3.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 3.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 3.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 3.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 3.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 3.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 3.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 3.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 3.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 2.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 2.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 2.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 2.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 2.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 2.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 2.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 2.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 2.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 2.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 2.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 2.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 2.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 2.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 2.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 2.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 2.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 2.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 2.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 2.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 2.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 2.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 2.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 2.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 2.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 2.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 2.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 2.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 2.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 2.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 2.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 2.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 2.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 2.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 2.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 2.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 2.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 2.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 2.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 2.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 2.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 2.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 2.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 2.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 2.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 2.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 2.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 2.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 2.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 2.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 2.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 2.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 2.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 2.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 2.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 2.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 2.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 2.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 2.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 2.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 2.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 2.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 2.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 2.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 2.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 2.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 2.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 2.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 2.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 2.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 2.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 1.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 1.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 1.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 1.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 1.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 1.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.6
Samples: 246

Max nTPM: 5.6
Min nTPM: 0.8
Std nTPM: 0.7
Median nTPM: 2.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 5.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 4.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 4.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 4.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 4.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 4.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 4.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 4.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 3.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 3.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 3.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 3.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 3.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 3.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 3.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 3.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 3.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 3.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 3.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 3.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 3.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 3.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 3.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 3.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 3.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 3.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 3.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 3.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 3.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 3.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 3.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 3.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 3.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 3.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 3.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 3.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 3.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 3.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 3.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 3.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 3.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 3.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 3.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 3.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 3.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 3.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 3.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 3.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 3.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 3.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 3.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 3.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 3.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 3.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 3.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 3.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 3.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 3.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 3.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 3.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 3.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 3.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 3.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 3.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 3.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 3.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 3.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 3.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 3.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 3.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 3.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 3.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 2.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 2.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 2.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 2.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 2.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 2.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 2.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 2.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 2.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 2.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 2.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 2.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 2.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 2.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 2.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 2.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 2.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 2.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 2.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 2.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 2.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 2.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 2.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 2.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 2.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 2.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 2.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 2.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 2.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 2.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 2.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 2.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 2.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 2.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 2.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 2.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 2.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 2.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 2.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 2.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 2.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 2.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 2.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 2.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 2.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 2.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 2.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 2.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 2.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 2.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 2.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 2.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 2.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 2.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 2.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 2.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 2.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 2.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 2.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 2.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 2.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 2.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 2.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 2.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 2.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 2.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 2.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 2.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 2.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 2.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 2.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 2.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 2.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 2.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 2.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 2.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 2.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 2.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 2.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 2.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 2.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 2.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 2.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 2.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 2.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 2.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 2.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 2.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 2.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 2.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 2.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 2.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 2.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 2.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 2.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 2.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 2.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 2.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 2.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 2.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 2.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 2.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 2.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 2.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 2.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 2.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 2.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 2.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 2.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 2.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 2.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 2.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 2.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 2.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 1.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 1.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 1.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 1.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 1.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 1.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 1.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 1.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 1.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 1.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 1.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 1.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 1.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 1.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 1.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 1.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 1.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 1.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 1.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 1.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 1.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 1.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 1.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 1.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 0.8
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Brain - Putamen (basal ganglia)
Average nTPM: 2.5
Samples: 205

Max nTPM: 5.0
Min nTPM: 0.8
Std nTPM: 0.8
Median nTPM: 2.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 5.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 5.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 4.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 4.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 4.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 4.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 4.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 4.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 3.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 3.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 3.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 3.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 3.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 3.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 3.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 3.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 3.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 3.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 3.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 3.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 3.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 3.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 3.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 3.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 3.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 3.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 3.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 3.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 3.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 3.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 3.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 3.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 3.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 3.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 3.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 3.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 3.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 3.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 3.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 3.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 3.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 3.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 3.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 3.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 3.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 3.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 3.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 3.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 2.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 2.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 2.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 2.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 2.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 2.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 2.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 2.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 2.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 2.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 2.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 2.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 2.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 2.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 2.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 2.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 2.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 2.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 2.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 2.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 2.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 2.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 2.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 2.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 2.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 2.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 2.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 2.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 2.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 2.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 2.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 2.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 2.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 2.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 2.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 2.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 2.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 2.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 2.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 2.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 2.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 2.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 2.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 2.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 2.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 2.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 2.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 2.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 2.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 2.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 2.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 2.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 2.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 2.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 2.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 2.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 2.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 2.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 2.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 2.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 2.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 2.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 2.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 2.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 2.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 2.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 2.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 2.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 2.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 2.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 2.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 1.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 1.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 1.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 1.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 1.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 1.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 1.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 1.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 1.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 1.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 1.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 1.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 1.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 1.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 1.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 1.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 1.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 1.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 1.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 0.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 0.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 0.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

65.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 57.6
FF:10164-103B2 76 years, female 57.6
Nucleus accumbens
Scaled Tags Per Million: 55.5
FF:10037-101F1 23-56 years, mixed 55.5
Putamen
Scaled Tags Per Million: 65.1
FF:10176-103C5 60 years, female 65.1
Globus pallidus
Scaled Tags Per Million: 28.9
FF:10175-103C4 60 years, female 29.0
FF:10161-103A8 76 years, female 28.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
Pig sample Sample description nTPM
Caudate
nTPM: 16.9
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.4
Sample A Female 19.1
Sample B Female 14.4
Sample C Male 16.7
Sample D Male 17.5
Putamen
nTPM: 18.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 16.3
Sample A Female 16.3
Sample B Female 17.8
Sample C Male 23.4
Sample D Male 17.1
Septum
nTPM: 18.6
Samples: 4

Max nTPM: 20.8
Min nTPM: 15.9
Sample A Female 19.5
Sample B Female 18.1
Sample C Male 20.8
Sample D Male 15.9
Ventral pallidum
nTPM: 19.1
Samples: 4

Max nTPM: 21.6
Min nTPM: 15.6
Sample A Female 21.6
Sample B Female 20.0
Sample C Male 19.0
Sample D Male 15.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 16.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 14.4
Sample A Male 17.8
Sample B Male 14.4
Sample C Female 18.1
Sample D Female 15.5
Septum
nTPM: 12.9
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.0
Sample A Male 12.4
Sample B Male 13.9
Sample C Female 13.3
Sample D Female 12.0
Ventral forebrain
nTPM: 15.7
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.3
Sample A Male 15.6
Sample B Male 14.3
Sample C Female 14.9
Sample D Female 18.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
69608929 Antisense, RP_050426_04_E05, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.1
69608929 Antisense, RP_050426_04_E05, Mouse strain C57BL/6J (56 days, male) 0.1

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