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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.1 nTPM
HPA Brain:149.1 nTPM
GTEx:54.1 nTPM
FANTOM5:179.8 Scaled Tags Per Million
Pig:110.0 nTPM
Mouse:109.5 nTPM
Allen mouse:12.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011732
Glial cells Not detected
Neuronal cells Not detected

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 131.7
1857 Female, age 85, left hemisphere 189.7
1854 Male, age 80, left hemisphere 181.6
2290 Female, age 72, unknown 153.8
2846 Female, age 79, unknown 128.4
1781 Male, age 74, unknown 117.8
2288 Male, age 75, left hemisphere 106.2
2289 Male, age 61, right hemisphere 102.2
2481 Female, age 94, left hemisphere 73.7
Globus pallidus, externus
nTPM: 54.5
2395 Male, age 75, both hemispheres 66.8
2772 Female, age 79, unknown 55.5
2567 Female, age 72, unknown 54.5
2646 Male, age 61, right hemisphere 50.9
1996 Male, age 80, right hemisphere 44.7
Globus pallidus, internus
nTPM: 50.2
2483 Female, age 94, right hemisphere 72.4
2287 Male, age 75, right hemisphere 60.0
2778 Female, age 91, both hemispheres 48.3
2566 Female, age 72, unknown 48.1
1818 Male, age 74, unknown 46.0
2037 Male, age 80, right hemisphere 39.2
2111 Female, age 85, right hemisphere 37.0
Nucleus accumbens
nTPM: 149.1
1856 Female, age 91, right hemisphere 239.8
2824 Male, age 61, right hemisphere 222.2
1806 Female, age 85, left hemisphere 179.9
1783 Male, age 74, unknown 166.0
2698 Female, age 72, unknown 124.3
2286 Male, age 75, left hemisphere 114.2
2732 Male, age 80, right hemisphere 80.3
2391 Female, age 94, left hemisphere 66.4
Nucleus basalis of Meynert
nTPM: 96.6
2393 Male, age 80, right hemisphere 144.2
2484 Female, age 94, left hemisphere 93.7
2821 Male, age 75, both hemispheres 91.3
2569 Male, age 61, both hemispheres 57.1
Nucleus of the diagonal band
nTPM: 86.7
2029 Male, age 61, right hemisphere 95.1
1812 Female, age 91, both hemispheres 93.5
2775 Male, age 80, right hemisphere 85.4
2195 Female, age 85, both hemispheres 81.3
1979 Male, age 74, unknown 78.2
Putamen
nTPM: 134.2
1838 Male, age 80, right hemisphere 206.7
1937 Female, age 91, right hemisphere 199.2
2466 Female, age 79, unknown 138.0
1829 Male, age 74, unknown 116.3
2647 Male, age 75, left hemisphere 112.2
2489 Female, age 72, unknown 89.0
2482 Female, age 94, left hemisphere 78.1
Septal nuclei
nTPM: 79.8
1960 Male, age 74, unknown 98.8
2031 Female, age 72, unknown 95.9
2629 Female, age 94, right hemisphere 82.7
2009 Female, age 91, both hemispheres 81.5
2394 Male, age 61, left hemisphere 72.2
2059 Female, age 85, both hemispheres 71.1
2199 Male, age 80, right hemisphere 56.2
Stria terminalis, bed nucleus
nTPM: 88.4
2486 Female, age 94, both hemispheres 95.9
1974 Female, age 91, both hemispheres 89.6
2201 Male, age 74, unknown 79.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 43.5
Samples: 246

Max nTPM: 139.2
Min nTPM: 9.7
Std nTPM: 22.5
Median nTPM: 40.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 139.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 112.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 105.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 104.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 102.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 101.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 94.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 92.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 84.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 83.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 82.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 81.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 79.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 77.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 77.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 76.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 76.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 76.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 75.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 75.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 73.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 67.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 67.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 67.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 67.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 66.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 66.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 65.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 65.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 64.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 63.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 63.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 62.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 62.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 62.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 61.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 61.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 61.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 61.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 61.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 60.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 60.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 60.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 60.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 59.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 58.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 58.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 57.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 57.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 56.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 56.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 56.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 56.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 55.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 55.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 55.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 55.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 54.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 54.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 53.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 53.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 53.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 52.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 51.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 51.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 51.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 50.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 48.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 48.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 47.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 47.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 47.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 47.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 46.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 46.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 46.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 45.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 45.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 45.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 44.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 44.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 44.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 44.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 44.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 43.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 42.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 42.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 41.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 40.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 40.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 40.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 40.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 39.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 39.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 39.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 39.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 39.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 38.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 38.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 38.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 38.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 37.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 37.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 37.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 37.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 36.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 35.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 34.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 33.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 33.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 33.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 33.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 32.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 32.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 32.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 32.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 32.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 32.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 30.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 30.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 30.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 30.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 30.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 30.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 29.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 28.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 28.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 28.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 28.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 28.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 27.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 27.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 26.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 26.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 26.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 26.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 25.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 25.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 25.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 25.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 24.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 24.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 24.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 24.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 24.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 24.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 23.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 23.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 23.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 23.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 23.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 22.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 22.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 22.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 22.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 22.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 22.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 21.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 21.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 21.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 20.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 20.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 20.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 20.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 20.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 20.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 19.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 19.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 19.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 18.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 18.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 18.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 18.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 18.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 18.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 18.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 18.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 18.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 18.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 18.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 17.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 17.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 17.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 17.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 17.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 17.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 17.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 16.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 15.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 15.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 12.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 12.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.1
Samples: 246

Max nTPM: 147.3
Min nTPM: 10.8
Std nTPM: 27.2
Median nTPM: 52.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 147.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 138.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 122.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 117.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 111.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 110.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 107.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 105.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 103.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 101.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 101.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 101.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 96.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 95.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 94.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 94.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 92.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 90.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 90.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 90.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 89.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 89.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 88.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 88.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 88.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 88.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 87.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 87.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 87.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 86.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 86.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 86.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 85.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 84.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 84.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 84.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 83.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 83.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 83.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 82.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 82.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 82.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 82.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 81.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 81.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 81.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 81.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 81.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 80.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 79.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 78.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 77.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 77.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 77.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 76.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 76.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 75.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 75.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 75.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 75.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 75.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 75.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 74.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 74.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 74.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 74.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 73.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 73.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 72.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 72.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 71.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 70.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 69.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 69.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 69.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 69.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 69.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 67.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 67.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 67.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 67.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 67.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 66.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 65.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 65.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 64.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 64.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 64.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 64.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 64.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 63.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 63.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 63.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 63.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 63.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 63.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 62.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 61.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 60.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 59.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 59.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 59.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 59.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 59.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 59.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 59.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 58.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 56.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 56.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 56.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 54.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 53.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 53.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 52.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 52.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 51.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 51.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 51.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 50.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 50.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 50.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 50.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 49.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 49.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 48.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 48.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 47.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 47.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 47.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 47.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 46.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 46.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 46.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 45.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 44.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 44.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 44.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 43.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 43.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 43.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 42.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 42.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 42.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 42.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 42.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 41.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 41.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 40.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 40.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 39.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 39.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 38.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 38.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 37.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 36.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 35.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 35.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 35.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 35.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 35.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 35.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 35.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 35.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 34.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 33.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 33.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 32.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 29.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 28.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 28.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 28.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 28.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 26.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 26.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 26.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 25.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 25.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 25.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 25.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 24.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 24.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 24.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 24.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 23.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 23.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 23.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 22.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 22.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 22.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 21.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 21.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 21.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 21.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 20.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 20.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 20.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 20.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 20.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 19.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 19.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 18.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 18.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 18.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 18.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 18.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 18.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 18.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 17.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 16.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 16.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 16.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 15.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 15.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 15.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 15.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 14.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 14.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 14.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 14.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 14.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 14.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 14.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.8
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Brain - Putamen (basal ganglia)
Average nTPM: 39.5
Samples: 205

Max nTPM: 113.9
Min nTPM: 11.4
Std nTPM: 21.3
Median nTPM: 34.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 113.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 104.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 100.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 92.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 90.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 89.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 83.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 83.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 82.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 82.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 78.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 76.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 74.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 71.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 71.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 71.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 70.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 70.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 70.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 69.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 69.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 68.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 67.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 66.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 66.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 64.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 64.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 64.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 64.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 63.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 63.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 62.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 61.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 60.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 58.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 57.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 57.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 54.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 54.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 54.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 53.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 52.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 51.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 51.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 51.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 51.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 51.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 50.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 50.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 49.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 49.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 49.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 49.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 49.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 48.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 48.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 48.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 46.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 46.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 46.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 45.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 44.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 43.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 43.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 43.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 42.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 41.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 41.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 38.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 38.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 38.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 38.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 38.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 37.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 37.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 37.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 37.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 36.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 35.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 35.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 34.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 34.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 33.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 33.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 33.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 33.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 33.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 32.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 32.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 32.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 31.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 31.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 31.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 30.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 30.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 29.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 28.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 28.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 27.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 27.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 27.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 26.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 26.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 25.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 25.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 25.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 25.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 25.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 24.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 24.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 24.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 24.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 24.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 23.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 23.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 23.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 23.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 23.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 23.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 22.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 22.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 22.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 22.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 22.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 22.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 22.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 22.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 21.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 21.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 21.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 21.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 21.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 21.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 20.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 20.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 20.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 20.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 20.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 20.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 19.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 19.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 19.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 19.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 19.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 19.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 18.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 18.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 17.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 17.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 17.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 17.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 17.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 16.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 16.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 16.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 16.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 16.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 16.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 16.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 15.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 15.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 14.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 13.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 13.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 13.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 13.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 11.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

179.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 179.8
FF:10164-103B2 76 years, female 179.8
Nucleus accumbens
Scaled Tags Per Million: 111.8
FF:10037-101F1 23-56 years, mixed 111.8
Putamen
Scaled Tags Per Million: 162.2
FF:10176-103C5 60 years, female 162.2
Globus pallidus
Scaled Tags Per Million: 52.2
FF:10175-103C4 60 years, female 60.4
FF:10161-103A8 76 years, female 44.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.0
Pig sample Sample description nTPM
Caudate
nTPM: 104.3
Samples: 4

Max nTPM: 121.0
Min nTPM: 92.0
Sample A Female 92.0
Sample B Female 102.2
Sample C Male 121.0
Sample D Male 102.1
Putamen
nTPM: 110.0
Samples: 4

Max nTPM: 153.4
Min nTPM: 73.9
Sample A Female 73.9
Sample B Female 99.4
Sample C Male 153.4
Sample D Male 113.4
Septum
nTPM: 107.0
Samples: 4

Max nTPM: 122.9
Min nTPM: 97.1
Sample A Female 108.6
Sample B Female 99.5
Sample C Male 122.9
Sample D Male 97.1
Ventral pallidum
nTPM: 104.4
Samples: 4

Max nTPM: 117.1
Min nTPM: 88.6
Sample A Female 113.5
Sample B Female 88.6
Sample C Male 117.1
Sample D Male 98.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 109.5
Samples: 4

Max nTPM: 116.8
Min nTPM: 103.8
Sample A Male 106.5
Sample B Male 103.8
Sample C Female 116.8
Sample D Female 110.8
Septum
nTPM: 106.6
Samples: 4

Max nTPM: 117.4
Min nTPM: 96.3
Sample A Male 117.4
Sample B Male 98.5
Sample C Female 96.3
Sample D Female 114.0
Ventral forebrain
nTPM: 109.2
Samples: 4

Max nTPM: 124.8
Min nTPM: 92.8
Sample A Male 103.4
Sample B Male 115.6
Sample C Female 92.8
Sample D Female 124.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.6
68633107 Antisense, RP_050125_02_D08, Mouse strain C57BL/6J (56 days, male) 16.4
71211695 Antisense, RP_050816_02_B09, Mouse strain C57BL/6J (56 days, male) 8.7
Pallidum
Expression energy: 10.7
68633107 Antisense, RP_050125_02_D08, Mouse strain C57BL/6J (56 days, male) 14.7
71211695 Antisense, RP_050816_02_B09, Mouse strain C57BL/6J (56 days, male) 6.6

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