HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:31.6 nTPM
HPA Brain:56.2 nTPM
GTEx:31.6 nTPM
FANTOM5:132.3 Scaled Tags Per Million
Pig:76.5 nTPM
Mouse:79.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027550
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 56.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
1898 Male, age 80, left hemisphere 53.4
1855 Male, age 76, left hemisphere 30.5
2621 Female, age 67, right hemisphere 26.1
1911 Female, age 85, right hemisphere 22.8
2529 Female, age 94, left hemisphere 20.8
2148 Female, age 91, left hemisphere 18.5
Dentate gyrus
nTPM: 29.2
1927 Female, age 91, both hemispheres 42.3
2010 Male, age 76, both hemispheres 33.2
2530 Female, age 94, left hemisphere 28.1
2246 Female, age 85, both hemispheres 26.1
2528 Male, age 74, both hemispheres 24.3
2531 Female, age 67, both hemispheres 21.0
Entorhinal gyrus
nTPM: 36.1
1938 Female, age 85, left hemisphere 46.2
2613 Female, age 94, left hemisphere 46.0
2764 Male, age 80, right hemisphere 43.6
1787 Male, age 76, left hemisphere 41.3
2686 Male, age 75, right hemisphere 20.1
2117 Female, age 91, right hemisphere 19.4
Hippocampus, CA1
nTPM: 40.4
2749 Male, age 80, left hemisphere 82.7
1873 Female, age 85, both hemispheres 35.1
2527 Male, age 74, both hemispheres 33.6
2082 Female, age 91, right hemisphere 27.6
2045 Male, age 76, both hemispheres 22.9
Hippocampus, CA2
nTPM: 36.4
1892 Male, age 76, both hemispheres 58.6
1963 Male, age 80, left hemisphere 40.0
1940 Female, age 85, left hemisphere 32.6
2437 Female, age 94, left hemisphere 31.4
2249 Male, age 74, both hemispheres 30.0
2113 Female, age 91, right hemisphere 25.7
Hippocampus, CA3
nTPM: 32.9
2137 Male, age 80, left hemisphere 58.9
1867 Male, age 76, both hemispheres 48.5
1891 Female, age 85, both hemispheres 28.3
2436 Male, age 74, both hemispheres 25.1
2861 Female, age 67, both hemispheres 18.6
2620 Female, age 94, left hemisphere 18.1
Parahippocampal cortex
nTPM: 35.7
1850 Male, age 80, both hemispheres 59.4
1990 Female, age 91, right hemisphere 41.2
2693 Female, age 94, both hemispheres 41.1
2245 Female, age 91, both hemispheres 38.3
1933 Female, age 85, both hemispheres 37.9
2250 Female, age 67, right hemisphere 32.2
2018 Male, age 76, both hemispheres 31.5
2532 Female, age 72, left hemisphere 29.0
2692 Male, age 74, both hemispheres 26.9
2622 Female, age 67, right hemisphere 19.6
Perirhinal gyrus
nTPM: 56.2
1847 Female, age 91, left hemisphere 70.2
1794 Male, age 80, right hemisphere 60.0
2521 Female, age 94, right hemisphere 56.3
1841 Female, age 85, right hemisphere 53.8
2848 Male, age 76, right hemisphere 40.6
Subiculum
nTPM: 31.0
1901 Male, age 80, both hemispheres 46.9
1977 Female, age 85, both hemispheres 40.7
2438 Female, age 94, left hemisphere 33.0
2619 Male, age 74, both hemispheres 27.6
2042 Male, age 76, both hemispheres 22.1
2729 Female, age 91, right hemisphere 16.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.6
Samples: 197

Max nTPM: 100.1
Min nTPM: 7.2
Std nTPM: 16.6
Median nTPM: 25.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 100.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 78.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 75.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 68.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 67.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 66.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 65.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 64.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 63.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 63.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 132.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 132.3
FF:10169-103B7 60 years, female 185.9
FF:10153-102I9 76 years, female 78.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 76.5
Pig sample Sample description nTPM
Subiculum
nTPM: 66.3
Samples: 4

Max nTPM: 81.9
Min nTPM: 59.6
Sample A Female 81.9
Sample B Female 59.6
Sample C Male 60.1
Sample D Male 63.7
Dorsal hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 81.4
Min nTPM: 47.9
Sample A Female 81.4
Sample B Female 71.4
Sample C Male 63.6
Sample D Male 47.9
Entorhinal cortex
nTPM: 76.5
Samples: 4

Max nTPM: 86.3
Min nTPM: 67.5
Sample A Female 86.3
Sample B Female 78.3
Sample C Male 73.8
Sample D Male 67.5
Ventral hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 76.3
Min nTPM: 44.9
Sample A Female 62.5
Sample B Female 44.9
Sample C Male 54.5
Sample D Male 76.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 79.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.0
Samples: 4

Max nTPM: 87.2
Min nTPM: 69.0
Sample A Male 75.5
Sample B Male 87.2
Sample C Female 69.0
Sample D Female 84.3
Hippocampal formation
nTPM: 72.4
Samples: 4

Max nTPM: 77.8
Min nTPM: 65.6
Sample A Male 74.5
Sample B Male 71.6
Sample C Female 65.6
Sample D Female 77.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
68844044 Antisense, RP_050217_02_G08, Mouse strain C57BL/6J (56 days, male) 4.4

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