We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DDX39B
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • DDX39B
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:66.9 nTPM
HPA Brain:9.2 nTPM
GTEx:66.9 nTPM
FANTOM5:168.0 Scaled Tags Per Million
Pig:149.0 nTPM
Mouse:124.2 nTPM
Allen mouse:5.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055334Antibody HPA058450Antibody CAB034012
Glial cells Not detectedNot detectedMedium
Neuronal cells LowNot detectedMedium






BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 6.2
2481 Female, age 94, left hemisphere 7.6
2290 Female, age 72, unknown 7.4
1854 Male, age 80, left hemisphere 6.6
1857 Female, age 85, left hemisphere 6.6
2289 Male, age 61, right hemisphere 6.6
2288 Male, age 75, left hemisphere 6.5
2846 Female, age 79, unknown 4.7
1781 Male, age 74, unknown 3.7
Globus pallidus, externus
nTPM: 8.7
2567 Female, age 72, unknown 9.7
1996 Male, age 80, right hemisphere 9.6
2772 Female, age 79, unknown 9.1
2395 Male, age 75, both hemispheres 7.7
2646 Male, age 61, right hemisphere 7.5
Globus pallidus, internus
nTPM: 9.2
2111 Female, age 85, right hemisphere 12.3
1818 Male, age 74, unknown 10.1
2778 Female, age 91, both hemispheres 9.7
2566 Female, age 72, unknown 8.8
2037 Male, age 80, right hemisphere 8.1
2483 Female, age 94, right hemisphere 7.9
2287 Male, age 75, right hemisphere 7.5
Nucleus accumbens
nTPM: 7.7
1856 Female, age 91, right hemisphere 9.5
2732 Male, age 80, right hemisphere 9.4
2824 Male, age 61, right hemisphere 9.1
2286 Male, age 75, left hemisphere 9.0
2391 Female, age 94, left hemisphere 7.4
2698 Female, age 72, unknown 6.8
1783 Male, age 74, unknown 6.7
1806 Female, age 85, left hemisphere 3.5
Nucleus basalis of Meynert
nTPM: 6.9
2393 Male, age 80, right hemisphere 7.3
2484 Female, age 94, left hemisphere 7.3
2569 Male, age 61, both hemispheres 6.6
2821 Male, age 75, both hemispheres 6.5
Nucleus of the diagonal band
nTPM: 7.1
1812 Female, age 91, both hemispheres 8.2
1979 Male, age 74, unknown 8.2
2029 Male, age 61, right hemisphere 7.6
2195 Female, age 85, both hemispheres 5.8
2775 Male, age 80, right hemisphere 5.8
Putamen
nTPM: 6.5
1937 Female, age 91, right hemisphere 8.6
1838 Male, age 80, right hemisphere 6.6
2647 Male, age 75, left hemisphere 6.5
1829 Male, age 74, unknown 6.4
2482 Female, age 94, left hemisphere 6.1
2466 Female, age 79, unknown 6.0
2489 Female, age 72, unknown 5.5
Septal nuclei
nTPM: 7.6
2059 Female, age 85, both hemispheres 9.6
2009 Female, age 91, both hemispheres 8.2
2031 Female, age 72, unknown 8.2
2394 Male, age 61, left hemisphere 7.9
2199 Male, age 80, right hemisphere 6.7
1960 Male, age 74, unknown 6.6
2629 Female, age 94, right hemisphere 5.9
Stria terminalis, bed nucleus
nTPM: 7.6
2201 Male, age 74, unknown 7.8
2486 Female, age 94, both hemispheres 7.6
1974 Female, age 91, both hemispheres 7.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 62.7
Samples: 246

Max nTPM: 95.9
Min nTPM: 22.4
Std nTPM: 13.4
Median nTPM: 61.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 95.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 95.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 94.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 93.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 93.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 91.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 90.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 89.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 89.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 87.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 87.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 86.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 86.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 85.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 84.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 83.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 83.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 82.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 81.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 80.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 80.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 80.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 79.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 79.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 78.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 78.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 78.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 77.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 77.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 76.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 75.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 75.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 75.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 75.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 75.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 74.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 74.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 74.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 74.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 74.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 73.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 73.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 73.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 73.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 73.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 73.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 73.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 72.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 72.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 72.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 71.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 70.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 70.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 70.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 70.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 70.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 70.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 69.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 69.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 69.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 69.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 69.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 69.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 69.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 69.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 68.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 68.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 68.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 68.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 67.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 67.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 67.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 66.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 66.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 66.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 66.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 66.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 66.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 66.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 66.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 65.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 65.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 65.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 65.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 65.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 64.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 64.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 63.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 63.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 63.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 63.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 63.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 63.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 63.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 63.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 63.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 62.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 62.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 62.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 61.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 61.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 61.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 61.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 61.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 61.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 61.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 61.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 61.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 61.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 60.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 60.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 60.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 60.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 60.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 59.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 59.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 59.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 59.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 59.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 58.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 58.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 58.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 58.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 57.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 57.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 57.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 57.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 57.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 56.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 56.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 56.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 56.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 56.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 56.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 56.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 56.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 55.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 55.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 55.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 55.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 54.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 54.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 54.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 54.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 53.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 53.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 53.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 53.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 53.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 53.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 53.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 52.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 52.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 51.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 51.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 50.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 50.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 50.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 50.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 50.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 50.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 50.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 49.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 49.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 49.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 49.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 48.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 48.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 48.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 48.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 48.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 47.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 47.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 46.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 46.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 46.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 46.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 46.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 45.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 45.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 45.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 45.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 44.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 43.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 43.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 43.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 42.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 42.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 41.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 40.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 40.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 37.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 37.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 37.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 36.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 31.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 22.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 66.8
Samples: 246

Max nTPM: 155.5
Min nTPM: 36.6
Std nTPM: 15.0
Median nTPM: 64.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 155.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 115.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 107.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 103.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 102.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 101.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 101.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 99.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 96.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 95.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 95.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 91.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 90.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 90.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 90.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 89.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 89.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 88.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 87.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 86.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 86.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 86.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 86.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 86.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 85.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 85.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 85.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 84.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 84.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 84.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 84.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 83.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 82.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 82.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 82.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 82.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 81.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 81.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 80.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 80.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 80.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 79.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 79.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 78.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 78.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 78.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 78.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 77.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 77.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 77.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 77.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 77.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 76.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 76.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 75.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 75.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 75.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 75.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 75.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 75.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 75.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 75.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 74.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 74.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 74.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 74.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 74.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 74.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 74.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 74.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 73.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 73.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 73.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 72.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 72.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 72.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 72.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 72.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 72.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 72.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 72.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 71.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 71.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 71.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 71.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 71.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 70.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 70.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 69.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 69.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 69.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 69.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 69.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 68.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 68.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 68.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 68.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 68.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 68.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 67.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 67.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 67.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 67.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 67.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 66.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 66.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 66.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 66.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 66.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 66.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 66.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 66.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 65.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 65.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 65.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 65.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 65.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 65.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 64.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 64.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 64.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 63.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 63.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 63.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 63.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 63.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 62.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 62.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 62.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 62.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 62.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 62.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 62.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 61.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 61.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 61.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 61.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 61.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 61.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 61.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 61.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 61.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 61.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 61.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 61.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 60.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 60.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 60.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 60.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 60.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 60.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 60.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 60.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 59.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 59.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 59.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 59.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 59.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 59.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 58.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 58.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 58.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 57.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 57.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 57.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 57.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 57.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 56.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 56.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 56.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 56.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 56.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 56.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 55.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 55.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 55.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 55.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 55.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 55.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 54.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 54.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 54.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 54.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 54.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 54.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 54.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 53.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 53.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 53.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 53.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 53.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 53.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 53.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 52.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 52.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 52.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 52.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 51.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 51.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 51.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 51.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 51.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 50.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 50.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 50.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 50.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 49.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 48.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 48.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 47.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 47.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 47.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 47.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 47.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 47.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 47.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 47.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 46.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 46.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 46.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 46.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 46.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 45.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 45.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 44.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 42.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 42.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 41.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 36.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 66.9
Samples: 205

Max nTPM: 113.5
Min nTPM: 37.6
Std nTPM: 14.3
Median nTPM: 65.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 113.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 112.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 101.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 98.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 96.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 96.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 96.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 94.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 93.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 92.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 92.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 91.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 91.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 89.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 89.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 87.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 87.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 87.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 87.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 87.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 86.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 86.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 86.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 85.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 85.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 85.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 85.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 84.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 84.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 83.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 82.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 82.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 82.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 81.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 81.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 80.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 80.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 80.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 80.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 79.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 79.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 78.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 78.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 78.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 78.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 78.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 77.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 77.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 76.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 76.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 75.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 75.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 74.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 74.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 74.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 74.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 74.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 73.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 72.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 72.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 72.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 72.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 71.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 71.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 71.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 71.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 71.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 71.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 70.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 70.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 70.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 70.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 69.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 69.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 69.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 69.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 68.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 68.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 68.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 68.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 68.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 68.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 67.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 67.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 67.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 67.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 67.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 67.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 67.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 66.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 66.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 66.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 66.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 66.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 65.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 65.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 65.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 65.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 65.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 65.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 65.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 65.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 64.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 64.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 64.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 64.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 64.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 63.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 63.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 63.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 63.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 62.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 62.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 61.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 61.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 60.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 60.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 60.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 60.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 60.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 60.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 60.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 59.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 59.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 59.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 59.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 59.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 59.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 59.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 59.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 59.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 58.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 58.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 58.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 58.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 57.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 57.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 56.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 56.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 56.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 56.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 56.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 56.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 56.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 55.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 55.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 55.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 54.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 54.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 54.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 53.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 53.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 52.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 51.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 51.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 51.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 50.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 50.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 50.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 50.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 50.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 50.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 50.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 49.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 48.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 48.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 48.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 48.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 47.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 46.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 46.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 44.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 44.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 43.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 43.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 43.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 42.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 41.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 37.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

168.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 139.7
FF:10164-103B2 76 years, female 139.7
Nucleus accumbens
Scaled Tags Per Million: 168.0
FF:10037-101F1 23-56 years, mixed 168.0
Putamen
Scaled Tags Per Million: 131.8
FF:10176-103C5 60 years, female 131.8
Globus pallidus
Scaled Tags Per Million: 157.4
FF:10175-103C4 60 years, female 160.0
FF:10161-103A8 76 years, female 154.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

149.0
Pig sample Sample description nTPM
Caudate
nTPM: 149.0
Samples: 4

Max nTPM: 152.8
Min nTPM: 143.0
Sample A Female 148.1
Sample B Female 152.1
Sample C Male 152.8
Sample D Male 143.0
Putamen
nTPM: 146.1
Samples: 4

Max nTPM: 166.6
Min nTPM: 123.5
Sample A Female 166.6
Sample B Female 134.3
Sample C Male 123.5
Sample D Male 160.0
Septum
nTPM: 147.6
Samples: 4

Max nTPM: 155.6
Min nTPM: 137.9
Sample A Female 155.6
Sample B Female 145.6
Sample C Male 137.9
Sample D Male 151.3
Ventral pallidum
nTPM: 144.1
Samples: 4

Max nTPM: 156.4
Min nTPM: 135.9
Sample A Female 141.5
Sample B Female 142.6
Sample C Male 135.9
Sample D Male 156.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 119.4
Samples: 4

Max nTPM: 121.6
Min nTPM: 115.8
Sample A Male 119.1
Sample B Male 115.8
Sample C Female 120.9
Sample D Female 121.6
Septum
nTPM: 124.2
Samples: 4

Max nTPM: 129.2
Min nTPM: 121.1
Sample A Male 121.1
Sample B Male 124.2
Sample C Female 129.2
Sample D Female 122.3
Ventral forebrain
nTPM: 118.6
Samples: 4

Max nTPM: 123.3
Min nTPM: 111.5
Sample A Male 117.0
Sample B Male 111.5
Sample C Female 122.6
Sample D Female 123.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.5
68148739 Antisense, RP_041116_02_A11, Mouse strain C57BL/6J (56 days, male) 3.5
Pallidum
Expression energy: 5.3
68148739 Antisense, RP_041116_02_A11, Mouse strain C57BL/6J (56 days, male) 5.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org